RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 LARGE2Q8N3Y3 721 aa23.87■■□□□ 1.41
MUC1-204ENST00000343256 CEMIPQ8WUJ3 1361 aa23.87■■□□□ 1.41
MUC1-204ENST00000343256 ABCC12Q96J65 1359 aa23.87■■□□□ 1.41
MUC1-204ENST00000343256 NBPF26B4DH59 902 aa23.86■■□□□ 1.41
MUC1-204ENST00000343256 NBPF10Q6P3W6 841 aaKnown RBP23.86■■□□□ 1.41
MUC1-204ENST00000343256 SAPCD2Q86UD0 394 aa23.86■■□□□ 1.41
MUC1-204ENST00000343256 NBPF15Q8N660 670 aa23.86■■□□□ 1.41
MUC1-204ENST00000343256 TIMELESSQ9UNS1 1208 aa23.86■■□□□ 1.41
MUC1-204ENST00000343256 CELF2O95319 508 aaKnown RBP23.85■■□□□ 1.41
MUC1-204ENST00000343256 NUTM1Q86Y26 1132 aa23.85■■□□□ 1.41
MUC1-204ENST00000343256 TCERG1O14776 1098 aaKnown RBP23.84■■□□□ 1.41
MUC1-204ENST00000343256 CC2D1BQ5T0F9 858 aaKnown RBP23.84■■□□□ 1.41
MUC1-204ENST00000343256 TNRC18O15417 2968 aaPredicted RBP23.83■■□□□ 1.41
MUC1-204ENST00000343256 CA12O43570 354 aa23.83■■□□□ 1.41
MUC1-204ENST00000343256 SNRPA1P09661 255 aaKnown RBP23.83■■□□□ 1.41
MUC1-204ENST00000343256 CRY2Q49AN0 593 aa23.83■■□□□ 1.41
MUC1-204ENST00000343256 COL3A1P02461 1466 aaPredicted RBP23.82■■□□□ 1.4
MUC1-204ENST00000343256 PDE4DIPQ5VU43 2346 aa23.82■■□□□ 1.4
MUC1-204ENST00000343256 CC2D2BQ6DHV5 1058 aa23.82■■□□□ 1.4
MUC1-204ENST00000343256 CIAPIN1Q6FI81 312 aa23.82■■□□□ 1.4
MUC1-204ENST00000343256 GLIS2Q9BZE0 524 aaPredicted RBP23.82■■□□□ 1.4
MUC1-204ENST00000343256 ZNF408Q9H9D4 720 aa23.82■■□□□ 1.4
MUC1-204ENST00000343256 BRPF1P55201 1214 aaPredicted RBP23.81■■□□□ 1.4
MUC1-204ENST00000343256 NIM1KQ8IY84 436 aa23.81■■□□□ 1.4
MUC1-204ENST00000343256 PHACTR3Q96KR7 559 aa23.81■■□□□ 1.4
MUC1-204ENST00000343256 ADARB2Q9NS39 739 aaKnown RBP23.81■■□□□ 1.4
MUC1-204ENST00000343256 RPGRQ92834 1020 aaKnown RBP23.8■■□□□ 1.4
MUC1-204ENST00000343256 ZIC5Q96T25 663 aa23.8■■□□□ 1.4
MUC1-204ENST00000343256 GPRC5DQ9NZD1 345 aa23.8■■□□□ 1.4
MUC1-204ENST00000343256 CNGB1Q14028 1251 aaPredicted RBP23.79■■□□□ 1.4
MUC1-204ENST00000343256 RGL2O15211 777 aa23.78■■□□□ 1.4
MUC1-204ENST00000343256 PPIP5K2O43314 1243 aa23.78■■□□□ 1.4
MUC1-204ENST00000343256 AOC3Q16853 763 aa23.78■■□□□ 1.4
MUC1-204ENST00000343256 NGEFQ8N5V2 710 aa23.78■■□□□ 1.4
MUC1-204ENST00000343256 PPEF1O14829 653 aaPredicted RBP23.77■■□□□ 1.4
MUC1-204ENST00000343256 SOX10P56693 466 aa23.77■■□□□ 1.4
MUC1-204ENST00000343256 MCM10Q7L590 875 aa23.77■■□□□ 1.4
MUC1-204ENST00000343256 HHIPL1Q96JK4 782 aa23.77■■□□□ 1.4
MUC1-204ENST00000343256 PRKAR2BP31323 418 aa23.76■■□□□ 1.39
MUC1-204ENST00000343256 NYXQ9GZU5 481 aa23.76■■□□□ 1.39
MUC1-204ENST00000343256 HOXA10P31260 410 aaPredicted RBP23.75■■□□□ 1.39
MUC1-204ENST00000343256 GMPSP49915 693 aaPredicted RBP23.75■■□□□ 1.39
MUC1-204ENST00000343256 CXCL9Q07325 125 aa23.75■■□□□ 1.39
MUC1-204ENST00000343256 NPC1L1Q9UHC9 1359 aa23.75■■□□□ 1.39
MUC1-204ENST00000343256 RBM17Q96I25 401 aaKnown RBP23.74■■□□□ 1.39
MUC1-204ENST00000343256 NUP98P52948 1817 aa23.73■■□□□ 1.39
MUC1-204ENST00000343256 GPTP24298 496 aa23.73■■□□□ 1.39
MUC1-204ENST00000343256 DCTN1Q14203 1278 aa23.73■■□□□ 1.39
MUC1-204ENST00000343256 GRIPAP1Q4V328 841 aa23.73■■□□□ 1.39
MUC1-204ENST00000343256 C3orf67Q6ZVT6 689 aa23.73■■□□□ 1.39
MUC1-204ENST00000343256 RIC1Q4ADV7 1423 aa23.73■■□□□ 1.39
MUC1-204ENST00000343256 PER1O15534 1290 aaPredicted RBP23.72■■□□□ 1.39
MUC1-204ENST00000343256 HIRAP54198 1017 aaPredicted RBP23.72■■□□□ 1.39
MUC1-204ENST00000343256 DLK2Q6UY11 383 aa23.72■■□□□ 1.39
MUC1-204ENST00000343256 KIF7Q2M1P5 1343 aa23.71■■□□□ 1.39
MUC1-204ENST00000343256 UBN2Q6ZU65 1347 aa23.71■■□□□ 1.39
MUC1-204ENST00000343256 NOGQ13253 232 aa23.71■■□□□ 1.39
MUC1-204ENST00000343256 SUSD4Q5VX71 490 aa23.71■■□□□ 1.39
MUC1-204ENST00000343256 TRPM4Q8TD43 1214 aa23.71■■□□□ 1.39
MUC1-204ENST00000343256 CRAMP1Q96RY5 1269 aa23.71■■□□□ 1.39
MUC1-204ENST00000343256 RSPH6AQ9H0K4 717 aa23.71■■□□□ 1.39
MUC1-204ENST00000343256 PGAP2Q9UHJ9 254 aa23.71■■□□□ 1.39
MUC1-204ENST00000343256 TTLL7Q6ZT98 887 aa23.7■■□□□ 1.38
MUC1-204ENST00000343256 RTF1Q92541 710 aaKnown RBP23.7■■□□□ 1.38
MUC1-204ENST00000343256 ZNRF3Q9ULT6 936 aa23.7■■□□□ 1.38
MUC1-204ENST00000343256 SHTN1A0MZ66 631 aa23.69■■□□□ 1.38
MUC1-204ENST00000343256 HUNKP57058 714 aa23.69■■□□□ 1.38
MUC1-204ENST00000343256 BCL2L13Q9BXK5 485 aa23.69■■□□□ 1.38
MUC1-204ENST00000343256 MIS18AQ9NYP9 233 aa23.69■■□□□ 1.38
MUC1-204ENST00000343256 MAP3K15Q6ZN16 1313 aa23.68■■□□□ 1.38
MUC1-204ENST00000343256 ERVV-1B6SEH8 477 aa23.68■■□□□ 1.38
MUC1-204ENST00000343256 CDC37L1Q7L3B6 337 aa23.68■■□□□ 1.38
MUC1-204ENST00000343256 USP48Q86UV5 1035 aa23.68■■□□□ 1.38
MUC1-204ENST00000343256 LAMB4A4D0S4 1761 aa23.68■■□□□ 1.38
MUC1-204ENST00000343256 RAD17O75943 681 aa23.67■■□□□ 1.38
MUC1-204ENST00000343256 ZBTB3Q9H5J0 574 aa23.67■■□□□ 1.38
MUC1-204ENST00000343256 ZC3H15Q8WU90 426 aaKnown RBP23.66■■□□□ 1.38
MUC1-204ENST00000343256 RRP7AQ9Y3A4 280 aaKnown RBP23.66■■□□□ 1.38
MUC1-204ENST00000343256 ATP6V0A2Q9Y487 856 aa23.66■■□□□ 1.38
MUC1-204ENST00000343256 NTSR2O95665 410 aa23.65■■□□□ 1.38
MUC1-204ENST00000343256 KIF6Q6ZMV9 814 aa23.65■■□□□ 1.38
MUC1-204ENST00000343256 TMX4Q9H1E5 349 aaPredicted RBP23.65■■□□□ 1.38
MUC1-204ENST00000343256 IBTKQ9P2D0 1353 aaPredicted RBP23.65■■□□□ 1.38
MUC1-204ENST00000343256 FAM155AB1AL88 458 aaPredicted RBP23.64■■□□□ 1.37
MUC1-204ENST00000343256 MYL6BP14649 208 aa23.64■■□□□ 1.37
MUC1-204ENST00000343256 PRPF38BQ5VTL8 546 aaKnown RBP23.64■■□□□ 1.37
MUC1-204ENST00000343256 VPS33BQ9H267 617 aa23.64■■□□□ 1.37
MUC1-204ENST00000343256 CNOT7Q9UIV1 285 aaKnown RBP23.64■■□□□ 1.37
MUC1-204ENST00000343256 RGMBQ6NW40 437 aa23.63■■□□□ 1.37
MUC1-204ENST00000343256 SUPT20HQ8NEM7 779 aa23.63■■□□□ 1.37
MUC1-204ENST00000343256 ABCC4O15439 1325 aa23.62■■□□□ 1.37
MUC1-204ENST00000343256 TRPA1O75762 1119 aa23.62■■□□□ 1.37
MUC1-204ENST00000343256 KIF23Q02241 960 aaPredicted RBP23.62■■□□□ 1.37
MUC1-204ENST00000343256 DPP8Q6V1X1 898 aaPredicted RBP23.62■■□□□ 1.37
MUC1-204ENST00000343256 ZNF34Q8IZ26 560 aa23.62■■□□□ 1.37
MUC1-204ENST00000343256 RTFDC1Q9BY42 306 aaPredicted RBP23.62■■□□□ 1.37
MUC1-204ENST00000343256 CDHR2Q9BYE9 1310 aa23.61■■□□□ 1.37
MUC1-204ENST00000343256 TNIP1Q15025 636 aa23.61■■□□□ 1.37
MUC1-204ENST00000343256 TAF7Q15545 349 aaPredicted RBP23.61■■□□□ 1.37
MUC1-204ENST00000343256 MICALL2Q8IY33 904 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms