RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 EPHA10Q5JZY3 1008 aa11.84□□□□□ -0.51
UBE2D3-203ENST00000343106 COPS6Q7L5N1 327 aa11.84□□□□□ -0.51
UBE2D3-203ENST00000343106 XAGE3Q8WTP9 111 aa11.84□□□□□ -0.51
UBE2D3-203ENST00000343106 DDX17Q92841 729 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-203ENST00000343106 MTMR6Q9Y217 621 aa11.84□□□□□ -0.51
UBE2D3-203ENST00000343106 SETD1BQ9UPS6 1966 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-203ENST00000343106 CHGBP05060 677 aa11.84□□□□□ -0.51
UBE2D3-203ENST00000343106 KRT28Q7Z3Y7 464 aa11.84□□□□□ -0.51
UBE2D3-203ENST00000343106 DDX21Q9NR30 783 aaKnown RBP eCLIP11.84□□□□□ -0.51
UBE2D3-203ENST00000343106 SLC27A2O14975 620 aa11.83□□□□□ -0.52
UBE2D3-203ENST00000343106 TPM2P07951 284 aa11.83□□□□□ -0.52
UBE2D3-203ENST00000343106 ST3GAL1Q11201 340 aa11.83□□□□□ -0.52
UBE2D3-203ENST00000343106 LARP1BQ659C4 914 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-203ENST00000343106 ZNF790Q6PG37 636 aa11.83□□□□□ -0.52
UBE2D3-203ENST00000343106 ZNF500O60304 480 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-203ENST00000343106 NEXNQ0ZGT2 675 aa11.83□□□□□ -0.52
UBE2D3-203ENST00000343106 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-203ENST00000343106 RAPGEF4Q8WZA2 1011 aa11.83□□□□□ -0.52
UBE2D3-203ENST00000343106 ATP6V1DQ9Y5K8 247 aa11.83□□□□□ -0.52
UBE2D3-203ENST00000343106 ATP5J2-PTCD1G3V325 749 aa11.82□□□□□ -0.52
UBE2D3-203ENST00000343106 PTCD1O75127 700 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-203ENST00000343106 MAP4K1Q92918 833 aa11.82□□□□□ -0.52
UBE2D3-203ENST00000343106 HDAC5Q9UQL6 1122 aa11.82□□□□□ -0.52
UBE2D3-203ENST00000343106 USP16Q9Y5T5 823 aa11.82□□□□□ -0.52
UBE2D3-203ENST00000343106 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.82□□□□□ -0.52
UBE2D3-203ENST00000343106 ADCY5O95622 1261 aa11.82□□□□□ -0.52
UBE2D3-203ENST00000343106 CSB-PGBD3P0DP91 1061 aa11.82□□□□□ -0.52
UBE2D3-203ENST00000343106 CAMK4Q16566 473 aa11.82□□□□□ -0.52
UBE2D3-203ENST00000343106 FAM13BQ9NYF5 915 aa11.82□□□□□ -0.52
UBE2D3-203ENST00000343106 NEURL1BA8MQ27 555 aa11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 GCKRQ14397 625 aa11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 DNTTIP2Q5QJE6 756 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 LARP1Q6PKG0 1096 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 C17orf53Q8N3J3 647 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 TMEM87AQ8NBN3 555 aa11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 CABLES1Q8TDN4 633 aa11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 UBE2Q2Q8WVN8 375 aa11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 ZNF496Q96IT1 587 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 ZSCAN31Q96LW9 406 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 DNAJC2Q99543 621 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 TTC12Q9H892 705 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 SH2B1Q9NRF2 756 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 TFIP11Q9UBB9 837 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 RRP9O43818 475 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 BLOC1S2Q6QNY1 142 aa11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 CDC37L1Q7L3B6 337 aa11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 PROSER2Q86WR7 435 aaPredicted RBP11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 TM6SF1Q9BZW5 370 aa11.81□□□□□ -0.52
UBE2D3-203ENST00000343106 NFAT5O94916 1531 aa11.8□□□□□ -0.52
UBE2D3-203ENST00000343106 TFCP2Q12800 502 aa11.8□□□□□ -0.52
UBE2D3-203ENST00000343106 CCDC129Q6ZRS4 1044 aa11.8□□□□□ -0.52
UBE2D3-203ENST00000343106 ANKRD13DQ6ZTN6 518 aa11.8□□□□□ -0.52
UBE2D3-203ENST00000343106 UBE3BQ7Z3V4 1068 aa11.8□□□□□ -0.52
UBE2D3-203ENST00000343106 ARID3AQ99856 593 aa11.8□□□□□ -0.52
UBE2D3-203ENST00000343106 PSMA5P28066 241 aa11.79□□□□□ -0.52
UBE2D3-203ENST00000343106 CHRNA2Q15822 529 aa11.79□□□□□ -0.52
UBE2D3-203ENST00000343106 SEC62Q99442 399 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-203ENST00000343106 SLC52A2Q9HAB3 445 aa11.79□□□□□ -0.52
UBE2D3-203ENST00000343106 UQCRHLA0A096LP55 91 aa11.79□□□□□ -0.52
UBE2D3-203ENST00000343106 HIP1O00291 1037 aa11.79□□□□□ -0.52
UBE2D3-203ENST00000343106 UQCRHP07919 91 aa11.79□□□□□ -0.52
UBE2D3-203ENST00000343106 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
UBE2D3-203ENST00000343106 LRRC2Q9BYS8 371 aa11.79□□□□□ -0.52
UBE2D3-203ENST00000343106 PPFIA3O75145 1194 aa11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 LETM1O95202 739 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 KIAA2012Q0VF49 1180 aa11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 SLFNL1Q499Z3 407 aa11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 TTC5Q8N0Z6 440 aa11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 FAM184AQ8NB25 1140 aa11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 KCNB2Q92953 911 aa11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 DBNLQ9UJU6 430 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 HEG1Q9ULI3 1381 aa11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 TATP17735 454 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 RPS6KB1P23443 525 aa11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 MCM5P33992 734 aa11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 FOSBP53539 338 aa11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 SPC24Q8NBT2 197 aa11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 DDX11Q96FC9 970 aa11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 METTL22Q9BUU2 404 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 ERBB3P21860 1342 aa11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 MARF1Q9Y4F3 1742 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-203ENST00000343106 A0A087WZG4 1122 aa11.77□□□□□ -0.52
UBE2D3-203ENST00000343106 UTYO14607 1347 aa11.77□□□□□ -0.52
UBE2D3-203ENST00000343106 PHKG2P15735 406 aa11.77□□□□□ -0.52
UBE2D3-203ENST00000343106 TOB2Q14106 344 aaPredicted RBP11.77□□□□□ -0.52
UBE2D3-203ENST00000343106 CSPP1Q1MSJ5 1256 aa11.77□□□□□ -0.52
UBE2D3-203ENST00000343106 DDX46Q7L014 1031 aaKnown RBP11.77□□□□□ -0.52
UBE2D3-203ENST00000343106 TTC6Q86TZ1 520 aa11.77□□□□□ -0.52
UBE2D3-203ENST00000343106 CKAP2LQ8IYA6 745 aa11.77□□□□□ -0.52
UBE2D3-203ENST00000343106 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.53
UBE2D3-203ENST00000343106 NPHP3Q7Z494 1330 aa11.77□□□□□ -0.53
UBE2D3-203ENST00000343106 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-203ENST00000343106 GOLGA6L4A6NEF3 574 aa11.77□□□□□ -0.53
UBE2D3-203ENST00000343106 AP5Z1O43299 807 aa11.77□□□□□ -0.53
UBE2D3-203ENST00000343106 JAK2O60674 1132 aa11.77□□□□□ -0.53
UBE2D3-203ENST00000343106 KDM4AO75164 1064 aa11.77□□□□□ -0.53
UBE2D3-203ENST00000343106 TAF5LO75529 589 aa11.77□□□□□ -0.53
UBE2D3-203ENST00000343106 HSP90B1P14625 803 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-203ENST00000343106 LIG1P18858 919 aa11.77□□□□□ -0.53
UBE2D3-203ENST00000343106 PTPN12Q05209 780 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms