RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 PHRF1Q9P1Y6 1649 aaKnown RBP9.52□□□□□ -0.89
NBR1-201ENST00000341165 LMTK3Q96Q04 1460 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 UTYO14607 1347 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 GCKRQ14397 625 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 VPS53Q5VIR6 699 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 TOM1L2Q6ZVM7 507 aa9.52□□□□□ -0.89
NBR1-201ENST00000341165 CGNQ9P2M7 1197 aaKnown RBP9.52□□□□□ -0.89
NBR1-201ENST00000341165 NEURL1BA8MQ27 555 aa9.51□□□□□ -0.89
NBR1-201ENST00000341165 PROSER3Q2NL68 480 aa9.51□□□□□ -0.89
NBR1-201ENST00000341165 ZSCAN23Q3MJ62 389 aa9.51□□□□□ -0.89
NBR1-201ENST00000341165 LSG1Q9H089 658 aaKnown RBP9.51□□□□□ -0.89
NBR1-201ENST00000341165 PALD1Q9ULE6 856 aa9.51□□□□□ -0.89
NBR1-201ENST00000341165 PA2G4Q9UQ80 394 aaKnown RBP9.51□□□□□ -0.89
NBR1-201ENST00000341165 EVA1CP58658 441 aa9.51□□□□□ -0.89
NBR1-201ENST00000341165 PRPF40BQ6NWY9 871 aaKnown RBP9.51□□□□□ -0.89
NBR1-201ENST00000341165 ADAMTSL3P82987 1691 aa9.51□□□□□ -0.89
NBR1-201ENST00000341165 GOLGA6L6A8MZA4 724 aa9.51□□□□□ -0.89
NBR1-201ENST00000341165 CCDC8Q9H0W5 538 aaPredicted RBP9.51□□□□□ -0.89
NBR1-201ENST00000341165 HEG1Q9ULI3 1381 aa9.51□□□□□ -0.89
NBR1-201ENST00000341165 PCDH11XQ9BZA7 1347 aa9.51□□□□□ -0.89
NBR1-201ENST00000341165 PCDH11YQ9BZA8 1340 aa9.51□□□□□ -0.89
NBR1-201ENST00000341165 KIAA2012Q0VF49 1180 aa9.5□□□□□ -0.89
NBR1-201ENST00000341165 KIF3AQ9Y496 699 aa9.5□□□□□ -0.89
NBR1-201ENST00000341165 MST1RQ04912 1400 aa9.5□□□□□ -0.89
NBR1-201ENST00000341165 TNS3Q68CZ2 1445 aa9.5□□□□□ -0.89
NBR1-201ENST00000341165 PLBD2Q8NHP8 589 aa9.5□□□□□ -0.89
NBR1-201ENST00000341165 BLOC1S2Q6QNY1 142 aa9.5□□□□□ -0.89
NBR1-201ENST00000341165 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
NBR1-201ENST00000341165 CCDC171Q6TFL3 1326 aa9.5□□□□□ -0.89
NBR1-201ENST00000341165 A0A087WZG4 1122 aa9.5□□□□□ -0.89
NBR1-201ENST00000341165 ZNF496Q96IT1 587 aaPredicted RBP9.5□□□□□ -0.89
NBR1-201ENST00000341165 BOLA2Q9H3K6 86 aa9.5□□□□□ -0.89
NBR1-201ENST00000341165 CCDC9Q9Y3X0 531 aaKnown RBP9.5□□□□□ -0.89
NBR1-201ENST00000341165 PXDNQ92626 1479 aa9.5□□□□□ -0.89
NBR1-201ENST00000341165 MARF1Q9Y4F3 1742 aaKnown RBP9.49□□□□□ -0.89
NBR1-201ENST00000341165 CHRNA2Q15822 529 aa9.49□□□□□ -0.89
NBR1-201ENST00000341165 PANK2Q9BZ23 570 aa9.49□□□□□ -0.89
NBR1-201ENST00000341165 KDM3BQ7LBC6 1761 aa9.49□□□□□ -0.89
NBR1-201ENST00000341165 GOLGA6L4A6NEF3 574 aa9.49□□□□□ -0.89
NBR1-201ENST00000341165 AK2P54819 239 aa9.49□□□□□ -0.89
NBR1-201ENST00000341165 TSPY26PQ9H489 355 aa9.49□□□□□ -0.89
NBR1-201ENST00000341165 STX6O43752 255 aa9.49□□□□□ -0.89
NBR1-201ENST00000341165 TNNT1P13805 278 aa9.49□□□□□ -0.89
NBR1-201ENST00000341165 LRSAM1Q6UWE0 723 aa9.49□□□□□ -0.89
NBR1-201ENST00000341165 ESPNB1AK53 854 aa9.49□□□□□ -0.89
NBR1-201ENST00000341165 ERVV-2B6SEH9 535 aa9.49□□□□□ -0.89
NBR1-201ENST00000341165 ZSCAN22P10073 491 aaPredicted RBP9.49□□□□□ -0.89
NBR1-201ENST00000341165 PDCL3Q9H2J4 239 aa9.49□□□□□ -0.89
NBR1-201ENST00000341165 COPRSQ9NQ92 184 aa9.49□□□□□ -0.89
NBR1-201ENST00000341165 CWC25Q9NXE8 425 aaPredicted RBP9.49□□□□□ -0.89
NBR1-201ENST00000341165 RBM8AQ9Y5S9 174 aaKnown RBP9.49□□□□□ -0.89
NBR1-201ENST00000341165 RUFY3Q7L099 469 aa9.48□□□□□ -0.89
NBR1-201ENST00000341165 UBE3BQ7Z3V4 1068 aa9.48□□□□□ -0.89
NBR1-201ENST00000341165 FAM184AQ8NB25 1140 aa9.48□□□□□ -0.89
NBR1-201ENST00000341165 TEX13AQ9BXU3 409 aaPredicted RBP9.48□□□□□ -0.89
NBR1-201ENST00000341165 SPATA31A3Q5VYP0 1347 aa9.48□□□□□ -0.89
NBR1-201ENST00000341165 NMIQ13287 307 aaPredicted RBP9.48□□□□□ -0.89
NBR1-201ENST00000341165 GORABQ5T7V8 394 aa9.48□□□□□ -0.89
NBR1-201ENST00000341165 U3KPZ7 1027 aaPredicted RBP9.48□□□□□ -0.89
NBR1-201ENST00000341165 N4BP2Q86UW6 1770 aaPredicted RBP9.48□□□□□ -0.89
NBR1-201ENST00000341165 CCDC66A2RUB6 948 aa9.48□□□□□ -0.89
NBR1-201ENST00000341165 MTERF4Q7Z6M4 381 aaKnown RBP9.48□□□□□ -0.89
NBR1-201ENST00000341165 TICAM2Q86XR7 235 aa9.48□□□□□ -0.89
NBR1-201ENST00000341165 PRAMEF22A3QJZ6 481 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 HSP90B1P14625 803 aaKnown RBP9.47□□□□□ -0.89
NBR1-201ENST00000341165 CLCN1P35523 988 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 CREB3L3Q68CJ9 461 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 PKP1Q13835 747 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.47□□□□□ -0.89
NBR1-201ENST00000341165 GOLGA6L1Q8N7Z2 621 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 CABLES1Q8TDN4 633 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 EAF2Q96CJ1 260 aaPredicted RBP9.47□□□□□ -0.89
NBR1-201ENST00000341165 ABCC6O95255 1503 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 ATP5JP18859 108 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 DNAJC2Q99543 621 aaKnown RBP9.47□□□□□ -0.89
NBR1-201ENST00000341165 ZSWIM6Q9HCJ5 1215 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 IGKV5-2P06315 115 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 HMGB1P09429 215 aaKnown RBP9.47□□□□□ -0.89
NBR1-201ENST00000341165 HS1BP3Q53T59 392 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 KIF6Q6ZMV9 814 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 CCDC83Q8IWF9 413 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 NEUROD6Q96NK8 337 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 CPDO75976 1380 aa9.47□□□□□ -0.89
NBR1-201ENST00000341165 VPS37CA5D8V6 355 aaPredicted RBP9.46□□□□□ -0.89
NBR1-201ENST00000341165 IL2RBP14784 551 aa9.46□□□□□ -0.89
NBR1-201ENST00000341165 PDIA6Q15084 440 aa9.46□□□□□ -0.89
NBR1-201ENST00000341165 TNNI3KQ59H18 835 aa9.46□□□□□ -0.89
NBR1-201ENST00000341165 FPGT-TNNI3KV9GXZ4 949 aa9.46□□□□□ -0.89
NBR1-201ENST00000341165 SYCE3A1L190 88 aa9.46□□□□□ -0.89
NBR1-201ENST00000341165 GJB2P29033 226 aa9.46□□□□□ -0.89
NBR1-201ENST00000341165 FOXD4L6Q3SYB3 417 aaPredicted RBP9.46□□□□□ -0.89
NBR1-201ENST00000341165 CCDC183Q5T5S1 534 aa9.46□□□□□ -0.89
NBR1-201ENST00000341165 FOXD4L3Q6VB84 417 aaPredicted RBP9.46□□□□□ -0.89
NBR1-201ENST00000341165 CCDC39Q9UFE4 941 aa9.46□□□□□ -0.89
NBR1-201ENST00000341165 SASH1O94885 1247 aa9.46□□□□□ -0.9
NBR1-201ENST00000341165 IL15P40933 162 aaPredicted RBP9.46□□□□□ -0.9
NBR1-201ENST00000341165 UBE2HP62256 183 aa9.46□□□□□ -0.9
NBR1-201ENST00000341165 LARP1BQ659C4 914 aaKnown RBP9.46□□□□□ -0.9
NBR1-201ENST00000341165 USP16Q9Y5T5 823 aa9.46□□□□□ -0.9
NBR1-201ENST00000341165 RFX7Q2KHR2 1363 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms