RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 ADCK5Q3MIX3 580 aa11.09□□□□□ -0.63
NECAP1-201ENST00000339754 LARP1BQ659C4 914 aaKnown RBP11.09□□□□□ -0.63
NECAP1-201ENST00000339754 WAPLQ7Z5K2 1190 aa11.09□□□□□ -0.63
NECAP1-201ENST00000339754 FERMT3Q86UX7 667 aa11.09□□□□□ -0.63
NECAP1-201ENST00000339754 PI4K2BQ8TCG2 481 aa11.09□□□□□ -0.63
NECAP1-201ENST00000339754 PDRG1Q9NUG6 133 aa11.09□□□□□ -0.63
NECAP1-201ENST00000339754 CEBPAP49715 358 aaPredicted RBP11.09□□□□□ -0.63
NECAP1-201ENST00000339754 MCM10Q7L590 875 aa11.09□□□□□ -0.63
NECAP1-201ENST00000339754 NUTM1Q86Y26 1132 aa11.09□□□□□ -0.63
NECAP1-201ENST00000339754 NECAB1Q8N987 351 aa11.09□□□□□ -0.63
NECAP1-201ENST00000339754 ZSWIM6Q9HCJ5 1215 aa11.09□□□□□ -0.63
NECAP1-201ENST00000339754 TFIP11Q9UBB9 837 aaKnown RBP11.09□□□□□ -0.63
NECAP1-201ENST00000339754 USP16Q9Y5T5 823 aa11.09□□□□□ -0.63
NECAP1-201ENST00000339754 TNRQ92752 1358 aa11.08□□□□□ -0.64
NECAP1-201ENST00000339754 NPHP3Q7Z494 1330 aa11.08□□□□□ -0.64
NECAP1-201ENST00000339754 CAVIN2O95810 425 aa11.08□□□□□ -0.64
NECAP1-201ENST00000339754 MUM1L1Q5H9M0 696 aa11.08□□□□□ -0.64
NECAP1-201ENST00000339754 CERS3Q8IU89 383 aa11.08□□□□□ -0.64
NECAP1-201ENST00000339754 LEO1Q8WVC0 666 aaPredicted RBP11.08□□□□□ -0.64
NECAP1-201ENST00000339754 PGBD1Q96JS3 809 aa11.08□□□□□ -0.64
NECAP1-201ENST00000339754 SCAND2PQ9GZW5 306 aaPredicted RBP11.08□□□□□ -0.64
NECAP1-201ENST00000339754 IL1RAPL2Q9NP60 686 aa11.08□□□□□ -0.64
NECAP1-201ENST00000339754 SPG7Q9UQ90 795 aa11.08□□□□□ -0.64
NECAP1-201ENST00000339754 KIF2AO00139 706 aaPredicted RBP11.08□□□□□ -0.64
NECAP1-201ENST00000339754 SPATA32Q96LK8 384 aa11.08□□□□□ -0.64
NECAP1-201ENST00000339754 UBXN6Q9BZV1 441 aa11.08□□□□□ -0.64
NECAP1-201ENST00000339754 GOLGA6L4A6NEF3 574 aa11.07□□□□□ -0.64
NECAP1-201ENST00000339754 HTATSF1O43719 755 aaKnown RBP11.07□□□□□ -0.64
NECAP1-201ENST00000339754 IRX3P78415 501 aaPredicted RBP11.07□□□□□ -0.64
NECAP1-201ENST00000339754 NEK11Q8NG66 645 aa11.07□□□□□ -0.64
NECAP1-201ENST00000339754 KCNB2Q92953 911 aa11.07□□□□□ -0.64
NECAP1-201ENST00000339754 TM6SF1Q9BZW5 370 aa11.07□□□□□ -0.64
NECAP1-201ENST00000339754 EFCC1Q9HA90 598 aa11.07□□□□□ -0.64
NECAP1-201ENST00000339754 GNAI3P08754 354 aa11.07□□□□□ -0.64
NECAP1-201ENST00000339754 C11orf57Q6ZUT1 292 aaPredicted RBP11.07□□□□□ -0.64
NECAP1-201ENST00000339754 JAKMIP1Q96N16 626 aaKnown RBP11.07□□□□□ -0.64
NECAP1-201ENST00000339754 ZRANB1Q9UGI0 708 aa11.07□□□□□ -0.64
NECAP1-201ENST00000339754 PTH1RQ03431 593 aa11.06□□□□□ -0.64
NECAP1-201ENST00000339754 E4F1Q66K89 784 aaPredicted RBP11.06□□□□□ -0.64
NECAP1-201ENST00000339754 CWC27Q6UX04 472 aaKnown RBP11.06□□□□□ -0.64
NECAP1-201ENST00000339754 FILIP1Q7Z7B0 1213 aa11.06□□□□□ -0.64
NECAP1-201ENST00000339754 TPCN1Q9ULQ1 816 aa11.06□□□□□ -0.64
NECAP1-201ENST00000339754 CYP46A1Q9Y6A2 500 aa11.06□□□□□ -0.64
NECAP1-201ENST00000339754 GOLGA6L19H0YKK7 550 aa11.06□□□□□ -0.64
NECAP1-201ENST00000339754 TXLNBQ8N3L3 684 aa11.06□□□□□ -0.64
NECAP1-201ENST00000339754 MIS18AQ9NYP9 233 aa11.06□□□□□ -0.64
NECAP1-201ENST00000339754 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.06□□□□□ -0.64
NECAP1-201ENST00000339754 POLR3GO15318 223 aaPredicted RBP11.05□□□□□ -0.64
NECAP1-201ENST00000339754 NOP2P46087 812 aaKnown RBP11.05□□□□□ -0.64
NECAP1-201ENST00000339754 ST5P78524 1137 aa11.05□□□□□ -0.64
NECAP1-201ENST00000339754 SNW1Q13573 536 aaKnown RBP11.05□□□□□ -0.64
NECAP1-201ENST00000339754 ARHGAP29Q52LW3 1261 aa11.05□□□□□ -0.64
NECAP1-201ENST00000339754 TEX35Q5T0J7 233 aa11.05□□□□□ -0.64
NECAP1-201ENST00000339754 SYT10Q6XYQ8 523 aa11.05□□□□□ -0.64
NECAP1-201ENST00000339754 RSPH14Q9UHP6 348 aa11.05□□□□□ -0.64
NECAP1-201ENST00000339754 METP08581 1390 aa11.05□□□□□ -0.64
NECAP1-201ENST00000339754 CRB1P82279 1406 aa11.05□□□□□ -0.64
NECAP1-201ENST00000339754 RRS1Q15050 365 aaKnown RBP11.05□□□□□ -0.64
NECAP1-201ENST00000339754 NME9Q86XW9 330 aa11.05□□□□□ -0.64
NECAP1-201ENST00000339754 SMARCE1Q969G3 411 aa11.05□□□□□ -0.64
NECAP1-201ENST00000339754 LRRFIP2Q9Y608 721 aaKnown RBP11.05□□□□□ -0.64
NECAP1-201ENST00000339754 PDCP20941 246 aa11.04□□□□□ -0.64
NECAP1-201ENST00000339754 TPM4P67936 248 aa11.04□□□□□ -0.64
NECAP1-201ENST00000339754 PRPF40BQ6NWY9 871 aaKnown RBP11.04□□□□□ -0.64
NECAP1-201ENST00000339754 KRBA2Q6ZNG9 492 aa11.04□□□□□ -0.64
NECAP1-201ENST00000339754 PAXIP1Q6ZW49 1069 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-201ENST00000339754 TXNDC2Q86VQ3 553 aa11.04□□□□□ -0.64
NECAP1-201ENST00000339754 DHX40Q8IX18 779 aaKnown RBP11.04□□□□□ -0.64
NECAP1-201ENST00000339754 CNTROBQ8N137 903 aa11.04□□□□□ -0.64
NECAP1-201ENST00000339754 SSH3Q8TE77 659 aa11.04□□□□□ -0.64
NECAP1-201ENST00000339754 SYTL4Q96C24 671 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-201ENST00000339754 RASSF4Q9H2L5 321 aa11.04□□□□□ -0.64
NECAP1-201ENST00000339754 ORC3Q9UBD5 711 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-201ENST00000339754 ADGRL3Q9HAR2 1447 aa11.04□□□□□ -0.64
NECAP1-201ENST00000339754 SOS1Q07889 1333 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-201ENST00000339754 SETD1AO15047 1707 aaKnown RBP11.04□□□□□ -0.64
NECAP1-201ENST00000339754 ADCY9O60503 1353 aa11.04□□□□□ -0.64
NECAP1-201ENST00000339754 HDGFP51858 240 aaKnown RBP11.04□□□□□ -0.64
NECAP1-201ENST00000339754 COL9A3Q14050 684 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-201ENST00000339754 NECTIN1Q15223 517 aa11.04□□□□□ -0.64
NECAP1-201ENST00000339754 LARP1Q6PKG0 1096 aaKnown RBP11.04□□□□□ -0.64
NECAP1-201ENST00000339754 NBPF11Q86T75 865 aa11.04□□□□□ -0.64
NECAP1-201ENST00000339754 DDX54Q8TDD1 881 aaKnown RBP11.04□□□□□ -0.64
NECAP1-201ENST00000339754 PPP1R13BQ96KQ4 1090 aa11.04□□□□□ -0.64
NECAP1-201ENST00000339754 OSBPL5Q9H0X9 879 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-201ENST00000339754 ZCCHC17Q9NP64 241 aaKnown RBP11.04□□□□□ -0.64
NECAP1-201ENST00000339754 LCMT1Q9UIC8 334 aa11.04□□□□□ -0.64
NECAP1-201ENST00000339754 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.03□□□□□ -0.64
NECAP1-201ENST00000339754 RAB11FIP3O75154 756 aa11.03□□□□□ -0.64
NECAP1-201ENST00000339754 TMCO3Q6UWJ1 677 aa11.03□□□□□ -0.64
NECAP1-201ENST00000339754 RGS22Q8NE09 1264 aa11.03□□□□□ -0.64
NECAP1-201ENST00000339754 BICD2Q8TD16 824 aa11.03□□□□□ -0.64
NECAP1-201ENST00000339754 ZFP91Q96JP5 570 aaPredicted RBP11.03□□□□□ -0.64
NECAP1-201ENST00000339754 ATP7BP35670 1465 aa11.03□□□□□ -0.64
NECAP1-201ENST00000339754 NRXN3Q9Y4C0 1643 aa11.03□□□□□ -0.64
NECAP1-201ENST00000339754 ARHGEF10O15013 1369 aa11.03□□□□□ -0.64
NECAP1-201ENST00000339754 PSDA5PKW4 1024 aaPredicted RBP11.03□□□□□ -0.64
NECAP1-201ENST00000339754 TRIM66O15016 1216 aa11.03□□□□□ -0.64
NECAP1-201ENST00000339754 GIGYF1O75420 1035 aaPredicted RBP11.03□□□□□ -0.64
NECAP1-201ENST00000339754 SULT6B1Q6IMI4 303 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms