RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ABCC4O15439 1325 aa17.84■□□□□ 0.45
APOBEC3B-202ENST00000335760 NPHP1O15259 732 aa17.83■□□□□ 0.45
APOBEC3B-202ENST00000335760 NTSR2O95665 410 aa17.83■□□□□ 0.45
APOBEC3B-202ENST00000335760 TPTE2Q6XPS3 522 aa17.83■□□□□ 0.45
APOBEC3B-202ENST00000335760 FTSJ3Q8IY81 847 aaKnown RBP17.83■□□□□ 0.45
APOBEC3B-202ENST00000335760 TRMT112Q9UI30 125 aaKnown RBP17.83■□□□□ 0.45
APOBEC3B-202ENST00000335760 ALDH1L1O75891 902 aa17.82■□□□□ 0.44
APOBEC3B-202ENST00000335760 GTF2E1P29083 439 aaPredicted RBP17.82■□□□□ 0.44
APOBEC3B-202ENST00000335760 CCT4P50991 539 aaKnown RBP17.82■□□□□ 0.44
APOBEC3B-202ENST00000335760 PRR5LQ6MZQ0 368 aa17.82■□□□□ 0.44
APOBEC3B-202ENST00000335760 NUTM1Q86Y26 1132 aa17.82■□□□□ 0.44
APOBEC3B-202ENST00000335760 DZIP1LQ8IYY4 767 aaKnown RBP17.82■□□□□ 0.44
APOBEC3B-202ENST00000335760 CCDC24Q8N4L8 307 aa17.82■□□□□ 0.44
APOBEC3B-202ENST00000335760 CNBD1Q8NA66 436 aa17.82■□□□□ 0.44
APOBEC3B-202ENST00000335760 NRXN2Q9P2S2 1712 aa17.82■□□□□ 0.44
APOBEC3B-202ENST00000335760 IBTKQ9P2D0 1353 aaPredicted RBP17.82■□□□□ 0.44
APOBEC3B-202ENST00000335760 GCKRQ14397 625 aa17.81■□□□□ 0.44
APOBEC3B-202ENST00000335760 N4BP2Q86UW6 1770 aaPredicted RBP17.8■□□□□ 0.44
APOBEC3B-202ENST00000335760 MS4A1P11836 297 aa17.8■□□□□ 0.44
APOBEC3B-202ENST00000335760 RRP1P56182 461 aaKnown RBP17.8■□□□□ 0.44
APOBEC3B-202ENST00000335760 ST5P78524 1137 aa17.8■□□□□ 0.44
APOBEC3B-202ENST00000335760 ERFEQ4G0M1 354 aa17.8■□□□□ 0.44
APOBEC3B-202ENST00000335760 RTL5Q5HYW3 569 aaPredicted RBP17.8■□□□□ 0.44
APOBEC3B-202ENST00000335760 INTS3Q68E01 1043 aaKnown RBP17.8■□□□□ 0.44
APOBEC3B-202ENST00000335760 TMEM57Q8N5G2 664 aa17.8■□□□□ 0.44
APOBEC3B-202ENST00000335760 JARID2Q92833 1246 aaPredicted RBP17.8■□□□□ 0.44
APOBEC3B-202ENST00000335760 FAM89AQ96GI7 184 aa17.8■□□□□ 0.44
APOBEC3B-202ENST00000335760 SH3TC1Q8TE82 1336 aa17.8■□□□□ 0.44
APOBEC3B-202ENST00000335760 PCCAP05165 728 aaPredicted RBP17.79■□□□□ 0.44
APOBEC3B-202ENST00000335760 CENPBP07199 599 aaPredicted RBP17.79■□□□□ 0.44
APOBEC3B-202ENST00000335760 RLBP1P12271 317 aa17.79■□□□□ 0.44
APOBEC3B-202ENST00000335760 SYNE4Q8N205 404 aa17.79■□□□□ 0.44
APOBEC3B-202ENST00000335760 ZBTB38Q8NAP3 1195 aaPredicted RBP17.79■□□□□ 0.44
APOBEC3B-202ENST00000335760 PANK1Q8TE04 598 aa17.79■□□□□ 0.44
APOBEC3B-202ENST00000335760 PPP1R1BQ9UD71 204 aaPredicted RBP17.79■□□□□ 0.44
APOBEC3B-202ENST00000335760 SUPT16HQ9Y5B9 1047 aaKnown RBP17.79■□□□□ 0.44
APOBEC3B-202ENST00000335760 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
APOBEC3B-202ENST00000335760 H7C1W4 665 aa17.78■□□□□ 0.44
APOBEC3B-202ENST00000335760 KLHL34Q8N239 644 aa17.78■□□□□ 0.44
APOBEC3B-202ENST00000335760 C9orf78Q9NZ63 289 aaPredicted RBP17.78■□□□□ 0.44
APOBEC3B-202ENST00000335760 ABCC12Q96J65 1359 aa17.77■□□□□ 0.44
APOBEC3B-202ENST00000335760 LRP5O75197 1615 aa17.77■□□□□ 0.43
APOBEC3B-202ENST00000335760 GRM8O00222 908 aa17.77■□□□□ 0.43
APOBEC3B-202ENST00000335760 C20orf194Q5TEA3 1177 aa17.77■□□□□ 0.43
APOBEC3B-202ENST00000335760 UBE3BQ7Z3V4 1068 aa17.77■□□□□ 0.43
APOBEC3B-202ENST00000335760 ITPRIPQ8IWB1 547 aa17.77■□□□□ 0.43
APOBEC3B-202ENST00000335760 C10orf71Q711Q0 1435 aa17.76■□□□□ 0.43
APOBEC3B-202ENST00000335760 IRS4O14654 1257 aaPredicted RBP17.76■□□□□ 0.43
APOBEC3B-202ENST00000335760 HCLS1P14317 486 aaPredicted RBP17.76■□□□□ 0.43
APOBEC3B-202ENST00000335760 PDE3AQ14432 1141 aa17.76■□□□□ 0.43
APOBEC3B-202ENST00000335760 SLC10A5Q5PT55 438 aa17.76■□□□□ 0.43
APOBEC3B-202ENST00000335760 BRIP1Q9BX63 1249 aa17.76■□□□□ 0.43
APOBEC3B-202ENST00000335760 CASP7P55210 303 aa17.75■□□□□ 0.43
APOBEC3B-202ENST00000335760 USP44Q9H0E7 712 aa17.75■□□□□ 0.43
APOBEC3B-202ENST00000335760 CDHR2Q9BYE9 1310 aa17.75■□□□□ 0.43
APOBEC3B-202ENST00000335760 ANKRD31Q8N7Z5 1873 aa17.74■□□□□ 0.43
APOBEC3B-202ENST00000335760 NBPF7P0C2Y1 421 aaPredicted RBP17.74■□□□□ 0.43
APOBEC3B-202ENST00000335760 COG6Q9Y2V7 657 aa17.74■□□□□ 0.43
APOBEC3B-202ENST00000335760 CD2APQ9Y5K6 639 aa17.74■□□□□ 0.43
APOBEC3B-202ENST00000335760 UTYO14607 1347 aa17.74■□□□□ 0.43
APOBEC3B-202ENST00000335760 DDX60Q8IY21 1712 aaKnown RBP17.74■□□□□ 0.43
APOBEC3B-202ENST00000335760 KIF13BQ9NQT8 1826 aa17.74■□□□□ 0.43
APOBEC3B-202ENST00000335760 TNRC6CQ9HCJ0 1690 aaKnown RBP17.73■□□□□ 0.43
APOBEC3B-202ENST00000335760 HSP90B1P14625 803 aaKnown RBP17.73■□□□□ 0.43
APOBEC3B-202ENST00000335760 PDE6BP35913 854 aa17.73■□□□□ 0.43
APOBEC3B-202ENST00000335760 MVPQ14764 893 aaKnown RBP17.73■□□□□ 0.43
APOBEC3B-202ENST00000335760 NLRP3Q96P20 1036 aa17.73■□□□□ 0.43
APOBEC3B-202ENST00000335760 MEIS3Q99687 375 aa17.73■□□□□ 0.43
APOBEC3B-202ENST00000335760 LAMB2P55268 1798 aa17.72■□□□□ 0.43
APOBEC3B-202ENST00000335760 RIC1Q4ADV7 1423 aa17.72■□□□□ 0.43
APOBEC3B-202ENST00000335760 PDE8AO60658 829 aa17.72■□□□□ 0.43
APOBEC3B-202ENST00000335760 C3orf67Q6ZVT6 689 aa17.72■□□□□ 0.43
APOBEC3B-202ENST00000335760 FHDC1Q9C0D6 1143 aaPredicted RBP17.72■□□□□ 0.43
APOBEC3B-202ENST00000335760 UBTFL1P0CB47 393 aaPredicted RBP17.71■□□□□ 0.43
APOBEC3B-202ENST00000335760 C2CD5Q86YS7 1000 aa17.71■□□□□ 0.43
APOBEC3B-202ENST00000335760 SUCLG2Q96I99 432 aa17.71■□□□□ 0.43
APOBEC3B-202ENST00000335760 GNAI3P08754 354 aa17.7■□□□□ 0.42
APOBEC3B-202ENST00000335760 TGFB2P61812 414 aa17.7■□□□□ 0.42
APOBEC3B-202ENST00000335760 PLA2G12BQ9BX93 195 aa17.7■□□□□ 0.42
APOBEC3B-202ENST00000335760 A0A0G2JLW4 131 aa17.69■□□□□ 0.42
APOBEC3B-202ENST00000335760 KLRG2A4D1S0 409 aaPredicted RBP17.69■□□□□ 0.42
APOBEC3B-202ENST00000335760 H0YIN7 160 aa17.69■□□□□ 0.42
APOBEC3B-202ENST00000335760 ZBTB7BO15156 539 aaPredicted RBP17.69■□□□□ 0.42
APOBEC3B-202ENST00000335760 CHRNA5P30532 468 aa17.69■□□□□ 0.42
APOBEC3B-202ENST00000335760 NLGN2Q8NFZ4 835 aa17.69■□□□□ 0.42
APOBEC3B-202ENST00000335760 DDX19BQ9UMR2 479 aa17.69■□□□□ 0.42
APOBEC3B-202ENST00000335760 PDZRN3Q9UPQ7 1066 aa17.69■□□□□ 0.42
APOBEC3B-202ENST00000335760 DPEP1P16444 411 aa17.68■□□□□ 0.42
APOBEC3B-202ENST00000335760 CTSWP56202 376 aa17.68■□□□□ 0.42
APOBEC3B-202ENST00000335760 FOXO4P98177 505 aa17.68■□□□□ 0.42
APOBEC3B-202ENST00000335760 EPHA10Q5JZY3 1008 aa17.68■□□□□ 0.42
APOBEC3B-202ENST00000335760 KAZALD1Q96I82 304 aa17.68■□□□□ 0.42
APOBEC3B-202ENST00000335760 SYT17Q9BSW7 474 aa17.68■□□□□ 0.42
APOBEC3B-202ENST00000335760 HDAC5Q9UQL6 1122 aa17.68■□□□□ 0.42
APOBEC3B-202ENST00000335760 COL11A2P13942 1736 aaPredicted RBP17.68■□□□□ 0.42
APOBEC3B-202ENST00000335760 KIAA1551Q9HCM1 1747 aa17.68■□□□□ 0.42
APOBEC3B-202ENST00000335760 MYH3P11055 1940 aa17.68■□□□□ 0.42
APOBEC3B-202ENST00000335760 SRGNP10124 158 aa17.67■□□□□ 0.42
APOBEC3B-202ENST00000335760 SF3B3Q15393 1217 aaKnown RBP17.67■□□□□ 0.42
APOBEC3B-202ENST00000335760 CRY2Q49AN0 593 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms