RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 MYO1BO43795 1136 aa19.08■□□□□ 0.64
PDZD8-201ENST00000334464 SCAF11Q99590 1463 aaKnown RBP19.08■□□□□ 0.64
PDZD8-201ENST00000334464 CDK13Q14004 1512 aaKnown RBP19.07■□□□□ 0.64
PDZD8-201ENST00000334464 EXOC1Q9NV70 894 aa19.07■□□□□ 0.64
PDZD8-201ENST00000334464 NBPF7P0C2Y1 421 aaPredicted RBP19.07■□□□□ 0.64
PDZD8-201ENST00000334464 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.07■□□□□ 0.64
PDZD8-201ENST00000334464 CCDC171Q6TFL3 1326 aa19.07■□□□□ 0.64
PDZD8-201ENST00000334464 SPDYE4A6NLX3 237 aa19.07■□□□□ 0.64
PDZD8-201ENST00000334464 CNNM2Q9H8M5 875 aa19.07■□□□□ 0.64
PDZD8-201ENST00000334464 SPINK5Q9NQ38 1064 aaPredicted RBP19.07■□□□□ 0.64
PDZD8-201ENST00000334464 IL16Q14005 1332 aa19.07■□□□□ 0.64
PDZD8-201ENST00000334464 FSIP1Q8NA03 581 aa19.07■□□□□ 0.64
PDZD8-201ENST00000334464 SMARCC1Q92922 1105 aaPredicted RBP19.07■□□□□ 0.64
PDZD8-201ENST00000334464 CCDC155Q8N6L0 562 aa19.06■□□□□ 0.64
PDZD8-201ENST00000334464 ZFYP08048 801 aaPredicted RBP19.06■□□□□ 0.64
PDZD8-201ENST00000334464 ARHGEF11O15085 1522 aa19.06■□□□□ 0.64
PDZD8-201ENST00000334464 SPAG1Q07617 926 aa19.06■□□□□ 0.64
PDZD8-201ENST00000334464 ANKS4BQ8N8V4 417 aa19.06■□□□□ 0.64
PDZD8-201ENST00000334464 KRT23Q9C075 422 aa19.06■□□□□ 0.64
PDZD8-201ENST00000334464 NUTM1Q86Y26 1132 aa19.06■□□□□ 0.64
PDZD8-201ENST00000334464 PPP1R42Q7Z4L9 355 aa19.06■□□□□ 0.64
PDZD8-201ENST00000334464 UVSSAQ2YD98 709 aa19.05■□□□□ 0.64
PDZD8-201ENST00000334464 UBE4AQ14139 1066 aa19.05■□□□□ 0.64
PDZD8-201ENST00000334464 CCDC102BQ68D86 513 aa19.05■□□□□ 0.64
PDZD8-201ENST00000334464 CWC25Q9NXE8 425 aaPredicted RBP19.05■□□□□ 0.64
PDZD8-201ENST00000334464 PPP1R14CQ8TAE6 165 aa19.05■□□□□ 0.64
PDZD8-201ENST00000334464 UTP14AQ9BVJ6 771 aaKnown RBP19.05■□□□□ 0.64
PDZD8-201ENST00000334464 KAT14Q9H8E8 782 aa19.05■□□□□ 0.64
PDZD8-201ENST00000334464 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.05■□□□□ 0.64
PDZD8-201ENST00000334464 V9GYY5 206 aaPredicted RBP19.05■□□□□ 0.64
PDZD8-201ENST00000334464 CABP5Q9NP86 173 aa19.05■□□□□ 0.64
PDZD8-201ENST00000334464 TRMT112Q9UI30 125 aaKnown RBP19.05■□□□□ 0.64
PDZD8-201ENST00000334464 BMP2KLQ5H9B9 411 aa19.05■□□□□ 0.64
PDZD8-201ENST00000334464 ECHDC1Q9NTX5 307 aa19.05■□□□□ 0.64
PDZD8-201ENST00000334464 CRNKL1Q9BZJ0 848 aaKnown RBP19.05■□□□□ 0.64
PDZD8-201ENST00000334464 TTLL12Q14166 644 aaPredicted RBP19.05■□□□□ 0.64
PDZD8-201ENST00000334464 SELENOOQ9BVL4 669 aa19.05■□□□□ 0.64
PDZD8-201ENST00000334464 ERICH4A6NGS2 130 aa19.04■□□□□ 0.64
PDZD8-201ENST00000334464 BICDL1Q6ZP65 573 aa19.04■□□□□ 0.64
PDZD8-201ENST00000334464 TTC14Q96N46 770 aa19.04■□□□□ 0.64
PDZD8-201ENST00000334464 NCOA7Q8NI08 942 aa19.04■□□□□ 0.64
PDZD8-201ENST00000334464 URI1O94763 535 aaPredicted RBP19.04■□□□□ 0.64
PDZD8-201ENST00000334464 KIAA0753Q2KHM9 967 aa19.04■□□□□ 0.64
PDZD8-201ENST00000334464 GNAQP50148 359 aa19.04■□□□□ 0.64
PDZD8-201ENST00000334464 BOLA2Q9H3K6 86 aa19.04■□□□□ 0.64
PDZD8-201ENST00000334464 KCNG4Q8TDN1 519 aa19.04■□□□□ 0.64
PDZD8-201ENST00000334464 STX6O43752 255 aa19.04■□□□□ 0.64
PDZD8-201ENST00000334464 IARSP41252 1262 aaKnown RBP19.04■□□□□ 0.64
PDZD8-201ENST00000334464 TMEM67Q5HYA8 995 aa19.04■□□□□ 0.64
PDZD8-201ENST00000334464 ATP2A1O14983 1001 aa19.03■□□□□ 0.64
PDZD8-201ENST00000334464 IQCGQ9H095 443 aaKnown RBP19.03■□□□□ 0.64
PDZD8-201ENST00000334464 SYNCQ9H7C4 482 aa19.03■□□□□ 0.64
PDZD8-201ENST00000334464 PRIMPOLQ96LW4 560 aa19.03■□□□□ 0.64
PDZD8-201ENST00000334464 METAP2P50579 478 aaKnown RBP eCLIP19.03■□□□□ 0.64
PDZD8-201ENST00000334464 SNW1Q13573 536 aaKnown RBP19.02■□□□□ 0.64
PDZD8-201ENST00000334464 RARSP54136 660 aaKnown RBP19.02■□□□□ 0.64
PDZD8-201ENST00000334464 MAPK8IP2Q13387 824 aaPredicted RBP19.02■□□□□ 0.64
PDZD8-201ENST00000334464 PPM1FP49593 454 aaPredicted RBP19.02■□□□□ 0.64
PDZD8-201ENST00000334464 FERMT3Q86UX7 667 aa19.02■□□□□ 0.64
PDZD8-201ENST00000334464 SSH1Q8WYL5 1049 aa19.02■□□□□ 0.64
PDZD8-201ENST00000334464 MYD88Q99836 296 aa19.02■□□□□ 0.64
PDZD8-201ENST00000334464 ST5P78524 1137 aa19.02■□□□□ 0.63
PDZD8-201ENST00000334464 MSANTD4Q8NCY6 345 aa19.02■□□□□ 0.63
PDZD8-201ENST00000334464 ASXL1Q8IXJ9 1541 aa19.02■□□□□ 0.63
PDZD8-201ENST00000334464 DDX46Q7L014 1031 aaKnown RBP19.02■□□□□ 0.63
PDZD8-201ENST00000334464 DDX23Q9BUQ8 820 aaKnown RBP19.02■□□□□ 0.63
PDZD8-201ENST00000334464 JADE2Q9NQC1 790 aa19.02■□□□□ 0.63
PDZD8-201ENST00000334464 ABCA10Q8WWZ4 1543 aa19.01■□□□□ 0.63
PDZD8-201ENST00000334464 TCERG1LQ5VWI1 586 aa19.01■□□□□ 0.63
PDZD8-201ENST00000334464 UQCRFS1P1P0C7P4 283 aa19.01■□□□□ 0.63
PDZD8-201ENST00000334464 JAKMIP2Q96AA8 810 aa19.01■□□□□ 0.63
PDZD8-201ENST00000334464 NAIPQ13075 1403 aa19.01■□□□□ 0.63
PDZD8-201ENST00000334464 ANKRD36BQ8N2N9 1353 aa19.01■□□□□ 0.63
PDZD8-201ENST00000334464 HSF2BPO75031 334 aa19.01■□□□□ 0.63
PDZD8-201ENST00000334464 CCDC77Q9BR77 488 aa19.01■□□□□ 0.63
PDZD8-201ENST00000334464 NOP2P46087 812 aaKnown RBP19.01■□□□□ 0.63
PDZD8-201ENST00000334464 APBB1IPQ7Z5R6 666 aaPredicted RBP19.01■□□□□ 0.63
PDZD8-201ENST00000334464 TNNT1P13805 278 aa19■□□□□ 0.63
PDZD8-201ENST00000334464 KIAA1524Q8TCG1 905 aa19■□□□□ 0.63
PDZD8-201ENST00000334464 CYLC1P35663 651 aaPredicted RBP19■□□□□ 0.63
PDZD8-201ENST00000334464 DYNC1I1O14576 645 aa19■□□□□ 0.63
PDZD8-201ENST00000334464 LMBR1Q8WVP7 490 aa19■□□□□ 0.63
PDZD8-201ENST00000334464 SRRTQ9BXP5 876 aaKnown RBP19■□□□□ 0.63
PDZD8-201ENST00000334464 SAMM50Q9Y512 469 aa19■□□□□ 0.63
PDZD8-201ENST00000334464 IVLP07476 585 aa19■□□□□ 0.63
PDZD8-201ENST00000334464 IMPG2Q9BZV3 1241 aa19■□□□□ 0.63
PDZD8-201ENST00000334464 CCDC14Q49A88 953 aa19■□□□□ 0.63
PDZD8-201ENST00000334464 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
PDZD8-201ENST00000334464 TMCO5BA8MYB1 307 aa18.99■□□□□ 0.63
PDZD8-201ENST00000334464 CD109Q6YHK3 1445 aa18.99■□□□□ 0.63
PDZD8-201ENST00000334464 LMAN1P49257 510 aa18.99■□□□□ 0.63
PDZD8-201ENST00000334464 RBM25P49756 843 aaKnown RBP18.99■□□□□ 0.63
PDZD8-201ENST00000334464 CCDC152Q4G0S7 254 aa18.99■□□□□ 0.63
PDZD8-201ENST00000334464 MCM10Q7L590 875 aa18.99■□□□□ 0.63
PDZD8-201ENST00000334464 MAATS1Q7Z4T9 603 aa18.99■□□□□ 0.63
PDZD8-201ENST00000334464 RNF187Q5TA31 235 aaPredicted RBP18.99■□□□□ 0.63
PDZD8-201ENST00000334464 BICD1Q96G01 975 aa18.99■□□□□ 0.63
PDZD8-201ENST00000334464 BCCIPQ9P287 314 aaKnown RBP eCLIP18.99■□□□□ 0.63
PDZD8-201ENST00000334464 PTCD1O75127 700 aaKnown RBP18.99■□□□□ 0.63
PDZD8-201ENST00000334464 CEP128Q6ZU80 1094 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms