RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CCDC191Q8NCU4 936 aa14.17□□□□□ -0.14
HDAC6-201ENST00000334136 NOL10Q9BSC4 688 aaKnown RBP14.17□□□□□ -0.14
HDAC6-201ENST00000334136 ROBO1Q9Y6N7 1651 aa14.17□□□□□ -0.14
HDAC6-201ENST00000334136 PROSER3Q2NL68 480 aa14.17□□□□□ -0.14
HDAC6-201ENST00000334136 GOLGA6L6A8MZA4 724 aa14.17□□□□□ -0.14
HDAC6-201ENST00000334136 NRDCO43847 1150 aa14.17□□□□□ -0.14
HDAC6-201ENST00000334136 AACSQ86V21 672 aa14.17□□□□□ -0.14
HDAC6-201ENST00000334136 TBC1D2Q9BYX2 928 aa14.17□□□□□ -0.14
HDAC6-201ENST00000334136 SH3TC1Q8TE82 1336 aa14.16□□□□□ -0.14
HDAC6-201ENST00000334136 CNBD1Q8NA66 436 aa14.16□□□□□ -0.14
HDAC6-201ENST00000334136 KIF1BPQ96EK5 621 aa14.16□□□□□ -0.14
HDAC6-201ENST00000334136 STRCQ7RTU9 1775 aa14.16□□□□□ -0.14
HDAC6-201ENST00000334136 ANKIB1Q9P2G1 1089 aa14.16□□□□□ -0.14
HDAC6-201ENST00000334136 PHLPP1O60346 1717 aa14.16□□□□□ -0.14
HDAC6-201ENST00000334136 TCIRG1Q13488 830 aa14.16□□□□□ -0.14
HDAC6-201ENST00000334136 MEGF6O75095 1541 aa14.16□□□□□ -0.14
HDAC6-201ENST00000334136 IGHDP01880 384 aa14.15□□□□□ -0.14
HDAC6-201ENST00000334136 NUCB2P80303 420 aa14.15□□□□□ -0.14
HDAC6-201ENST00000334136 TTC39AQ5SRH9 613 aa14.15□□□□□ -0.14
HDAC6-201ENST00000334136 PRPF40AO75400 957 aaKnown RBP14.15□□□□□ -0.14
HDAC6-201ENST00000334136 NKX1-1Q15270 411 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-201ENST00000334136 ANO2Q9NQ90 1003 aa14.15□□□□□ -0.14
HDAC6-201ENST00000334136 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.15□□□□□ -0.14
HDAC6-201ENST00000334136 DNAJC2Q99543 621 aaKnown RBP14.15□□□□□ -0.14
HDAC6-201ENST00000334136 REC8O95072 547 aa14.15□□□□□ -0.14
HDAC6-201ENST00000334136 TXNRD1Q16881 649 aa14.15□□□□□ -0.14
HDAC6-201ENST00000334136 CAMTA1Q9Y6Y1 1673 aa14.15□□□□□ -0.15
HDAC6-201ENST00000334136 USPL1Q5W0Q7 1092 aa14.14□□□□□ -0.15
HDAC6-201ENST00000334136 INTS3Q68E01 1043 aaKnown RBP14.14□□□□□ -0.15
HDAC6-201ENST00000334136 RUFY2Q8WXA3 655 aa14.14□□□□□ -0.15
HDAC6-201ENST00000334136 AKAP2Q9Y2D5 859 aa14.14□□□□□ -0.15
HDAC6-201ENST00000334136 RAB11FIP3O75154 756 aa14.14□□□□□ -0.15
HDAC6-201ENST00000334136 MON2Q7Z3U7 1717 aa14.14□□□□□ -0.15
HDAC6-201ENST00000334136 IFIT1P09914 478 aaKnown RBP14.14□□□□□ -0.15
HDAC6-201ENST00000334136 HCLS1P14317 486 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-201ENST00000334136 MED1Q15648 1581 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-201ENST00000334136 EN1Q05925 392 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-201ENST00000334136 CHD1LQ86WJ1 897 aa14.13□□□□□ -0.15
HDAC6-201ENST00000334136 ANKRD18AQ8IVF6 992 aa14.13□□□□□ -0.15
HDAC6-201ENST00000334136 MAP3K15Q6ZN16 1313 aa14.13□□□□□ -0.15
HDAC6-201ENST00000334136 MSL1Q68DK7 614 aa14.13□□□□□ -0.15
HDAC6-201ENST00000334136 C6orf229H3BNL8 230 aa14.13□□□□□ -0.15
HDAC6-201ENST00000334136 GCKRQ14397 625 aa14.13□□□□□ -0.15
HDAC6-201ENST00000334136 WASHC4Q2M389 1173 aa14.12□□□□□ -0.15
HDAC6-201ENST00000334136 NLGN1Q8N2Q7 840 aa14.12□□□□□ -0.15
HDAC6-201ENST00000334136 CCDC24Q8N4L8 307 aa14.12□□□□□ -0.15
HDAC6-201ENST00000334136 PANK2Q9BZ23 570 aa14.12□□□□□ -0.15
HDAC6-201ENST00000334136 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-201ENST00000334136 FSD1Q9BTV5 496 aa14.12□□□□□ -0.15
HDAC6-201ENST00000334136 RPS6KA4O75676 772 aa14.12□□□□□ -0.15
HDAC6-201ENST00000334136 ATP8B2P98198 1209 aa14.12□□□□□ -0.15
HDAC6-201ENST00000334136 SLC27A3Q5K4L6 730 aa14.12□□□□□ -0.15
HDAC6-201ENST00000334136 GIGYF2Q6Y7W6 1299 aaKnown RBP14.12□□□□□ -0.15
HDAC6-201ENST00000334136 TOMM22Q9NS69 142 aa14.12□□□□□ -0.15
HDAC6-201ENST00000334136 IQSEC2Q5JU85 1478 aa14.12□□□□□ -0.15
HDAC6-201ENST00000334136 PIK3C2AO00443 1686 aa14.11□□□□□ -0.15
HDAC6-201ENST00000334136 APPP05067 770 aa14.11□□□□□ -0.15
HDAC6-201ENST00000334136 NUTM1Q86Y26 1132 aa14.11□□□□□ -0.15
HDAC6-201ENST00000334136 ANKRD44Q8N8A2 993 aa14.11□□□□□ -0.15
HDAC6-201ENST00000334136 SMARCA5O60264 1052 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-201ENST00000334136 CDC45O75419 566 aa14.11□□□□□ -0.15
HDAC6-201ENST00000334136 CNTROBQ8N137 903 aa14.11□□□□□ -0.15
HDAC6-201ENST00000334136 COL3A1P02461 1466 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-201ENST00000334136 CYP19A1P11511 503 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-201ENST00000334136 C8orf34Q49A92 452 aa14.11□□□□□ -0.15
HDAC6-201ENST00000334136 WWC3Q9ULE0 1092 aa14.11□□□□□ -0.15
HDAC6-201ENST00000334136 AKAP12Q02952 1782 aa14.1□□□□□ -0.15
HDAC6-201ENST00000334136 NEURL1BA8MQ27 555 aa14.1□□□□□ -0.15
HDAC6-201ENST00000334136 FKBP4Q02790 459 aaKnown RBP eCLIP14.1□□□□□ -0.15
HDAC6-201ENST00000334136 CAVIN4Q5BKX8 364 aa14.1□□□□□ -0.15
HDAC6-201ENST00000334136 PCDHB15Q9Y5E8 787 aa14.1□□□□□ -0.15
HDAC6-201ENST00000334136 ZNF592Q92610 1267 aa14.1□□□□□ -0.15
HDAC6-201ENST00000334136 CCDC8Q9H0W5 538 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-201ENST00000334136 ISY1Q9ULR0 285 aaKnown RBP14.1□□□□□ -0.15
HDAC6-201ENST00000334136 ZBTB7BO15156 539 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-201ENST00000334136 NBPF7P0C2Y1 421 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-201ENST00000334136 BICC1Q9H694 974 aaKnown RBP14.1□□□□□ -0.15
HDAC6-201ENST00000334136 ZBTB40Q9NUA8 1239 aa14.1□□□□□ -0.15
HDAC6-201ENST00000334136 NRKQ7Z2Y5 1582 aa14.09□□□□□ -0.15
HDAC6-201ENST00000334136 PDE8AO60658 829 aa14.09□□□□□ -0.15
HDAC6-201ENST00000334136 CSPP1Q1MSJ5 1256 aa14.09□□□□□ -0.15
HDAC6-201ENST00000334136 NEK4P51957 841 aa14.09□□□□□ -0.15
HDAC6-201ENST00000334136 SLC5A1P13866 664 aa14.09□□□□□ -0.15
HDAC6-201ENST00000334136 CCDC173Q0VFZ6 552 aa14.09□□□□□ -0.15
HDAC6-201ENST00000334136 SLIT3O75094 1523 aa14.09□□□□□ -0.15
HDAC6-201ENST00000334136 TPM2P07951 284 aa14.08□□□□□ -0.15
HDAC6-201ENST00000334136 CEMIPQ8WUJ3 1361 aa14.08□□□□□ -0.16
HDAC6-201ENST00000334136 RRP9O43818 475 aaKnown RBP14.08□□□□□ -0.16
HDAC6-201ENST00000334136 SRP68Q9UHB9 627 aaKnown RBP14.08□□□□□ -0.16
HDAC6-201ENST00000334136 PA2G4Q9UQ80 394 aaKnown RBP14.08□□□□□ -0.16
HDAC6-201ENST00000334136 LTBP4Q8N2S1 1624 aa14.07□□□□□ -0.16
HDAC6-201ENST00000334136 K7ELQ4 463 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-201ENST00000334136 BEND3Q5T5X7 828 aa14.07□□□□□ -0.16
HDAC6-201ENST00000334136 XRCC6P12956 609 aaKnown RBP eCLIP14.07□□□□□ -0.16
HDAC6-201ENST00000334136 CEP85Q6P2H3 762 aa14.07□□□□□ -0.16
HDAC6-201ENST00000334136 AMOTL1Q8IY63 956 aa14.07□□□□□ -0.16
HDAC6-201ENST00000334136 UBE2Q2Q8WVN8 375 aa14.07□□□□□ -0.16
HDAC6-201ENST00000334136 ERVV-1B6SEH8 477 aa14.07□□□□□ -0.16
HDAC6-201ENST00000334136 SEC24BO95487 1268 aa14.07□□□□□ -0.16
HDAC6-201ENST00000334136 IL15P40933 162 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms