RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 API5Q9BZZ5 524 aaKnown RBP20.4■□□□□ 0.86
LRRC28-202ENST00000331450 ABCC12Q96J65 1359 aa20.39■□□□□ 0.85
LRRC28-202ENST00000331450 TRIM27P14373 513 aa20.39■□□□□ 0.85
LRRC28-202ENST00000331450 CWF19L2Q2TBE0 894 aaKnown RBP20.39■□□□□ 0.85
LRRC28-202ENST00000331450 ATF7IPQ6VMQ6 1270 aa20.39■□□□□ 0.85
LRRC28-202ENST00000331450 NBPF5PQ86XG9 351 aaPredicted RBP20.39■□□□□ 0.85
LRRC28-202ENST00000331450 CCDC191Q8NCU4 936 aa20.39■□□□□ 0.85
LRRC28-202ENST00000331450 IPO8O15397 1037 aaKnown RBP20.38■□□□□ 0.85
LRRC28-202ENST00000331450 ZKSCAN2Q63HK3 967 aa20.38■□□□□ 0.85
LRRC28-202ENST00000331450 PPP1R42Q7Z4L9 355 aa20.38■□□□□ 0.85
LRRC28-202ENST00000331450 CNBD1Q8NA66 436 aa20.38■□□□□ 0.85
LRRC28-202ENST00000331450 FRAT1Q92837 279 aaPredicted RBP20.38■□□□□ 0.85
LRRC28-202ENST00000331450 NYXQ9GZU5 481 aa20.38■□□□□ 0.85
LRRC28-202ENST00000331450 TNNQ9UQP3 1299 aa20.38■□□□□ 0.85
LRRC28-202ENST00000331450 CWC25Q9NXE8 425 aaPredicted RBP20.37■□□□□ 0.85
LRRC28-202ENST00000331450 FAM177BA6PVY3 158 aa20.36■□□□□ 0.85
LRRC28-202ENST00000331450 ALDH1L1O75891 902 aa20.36■□□□□ 0.85
LRRC28-202ENST00000331450 SLC4A10Q6U841 1118 aa20.36■□□□□ 0.85
LRRC28-202ENST00000331450 TPTE2Q6XPS3 522 aa20.36■□□□□ 0.85
LRRC28-202ENST00000331450 UTP14AQ9BVJ6 771 aaKnown RBP20.36■□□□□ 0.85
LRRC28-202ENST00000331450 GCKRQ14397 625 aa20.35■□□□□ 0.85
LRRC28-202ENST00000331450 NUTM1Q86Y26 1132 aa20.35■□□□□ 0.85
LRRC28-202ENST00000331450 SRCIN1Q9C0H9 1055 aa20.35■□□□□ 0.85
LRRC28-202ENST00000331450 CACNA1SQ13698 1873 aa20.35■□□□□ 0.85
LRRC28-202ENST00000331450 SH3TC1Q8TE82 1336 aa20.34■□□□□ 0.85
LRRC28-202ENST00000331450 PCCAP05165 728 aaPredicted RBP20.34■□□□□ 0.85
LRRC28-202ENST00000331450 ERFEQ4G0M1 354 aa20.34■□□□□ 0.85
LRRC28-202ENST00000331450 TRMT112Q9UI30 125 aaKnown RBP20.34■□□□□ 0.85
LRRC28-202ENST00000331450 ST5P78524 1137 aa20.33■□□□□ 0.85
LRRC28-202ENST00000331450 INTS3Q68E01 1043 aaKnown RBP20.33■□□□□ 0.85
LRRC28-202ENST00000331450 CCDC24Q8N4L8 307 aa20.33■□□□□ 0.85
LRRC28-202ENST00000331450 ZBTB38Q8NAP3 1195 aaPredicted RBP20.33■□□□□ 0.85
LRRC28-202ENST00000331450 PPP1R1BQ9UD71 204 aaPredicted RBP20.33■□□□□ 0.85
LRRC28-202ENST00000331450 CD2APQ9Y5K6 639 aa20.33■□□□□ 0.85
LRRC28-202ENST00000331450 CDHR2Q9BYE9 1310 aa20.32■□□□□ 0.84
LRRC28-202ENST00000331450 CCT4P50991 539 aaKnown RBP20.32■□□□□ 0.84
LRRC28-202ENST00000331450 CASP7P55210 303 aa20.32■□□□□ 0.84
LRRC28-202ENST00000331450 SLC10A5Q5PT55 438 aa20.32■□□□□ 0.84
LRRC28-202ENST00000331450 SYNE4Q8N205 404 aa20.32■□□□□ 0.84
LRRC28-202ENST00000331450 FAM89AQ96GI7 184 aa20.32■□□□□ 0.84
LRRC28-202ENST00000331450 BRIP1Q9BX63 1249 aa20.32■□□□□ 0.84
LRRC28-202ENST00000331450 FHDC1Q9C0D6 1143 aaPredicted RBP20.32■□□□□ 0.84
LRRC28-202ENST00000331450 H7C1W4 665 aa20.31■□□□□ 0.84
LRRC28-202ENST00000331450 RLBP1P12271 317 aa20.31■□□□□ 0.84
LRRC28-202ENST00000331450 CLUAP1Q96AJ1 413 aa20.31■□□□□ 0.84
LRRC28-202ENST00000331450 UTYO14607 1347 aa20.3■□□□□ 0.84
LRRC28-202ENST00000331450 KLRG2A4D1S0 409 aaPredicted RBP20.3■□□□□ 0.84
LRRC28-202ENST00000331450 NPHP1O15259 732 aa20.3■□□□□ 0.84
LRRC28-202ENST00000331450 GTF2E1P29083 439 aaPredicted RBP20.3■□□□□ 0.84
LRRC28-202ENST00000331450 DZIP1LQ8IYY4 767 aaKnown RBP20.3■□□□□ 0.84
LRRC28-202ENST00000331450 GRM8O00222 908 aa20.29■□□□□ 0.84
LRRC28-202ENST00000331450 PLIN1O60240 522 aa20.29■□□□□ 0.84
LRRC28-202ENST00000331450 UBE3BQ7Z3V4 1068 aa20.29■□□□□ 0.84
LRRC28-202ENST00000331450 ARFGEF1Q9Y6D6 1849 aa20.29■□□□□ 0.84
LRRC28-202ENST00000331450 TAF1P21675 1872 aa20.28■□□□□ 0.84
LRRC28-202ENST00000331450 RRP1P56182 461 aaKnown RBP20.28■□□□□ 0.84
LRRC28-202ENST00000331450 RTL5Q5HYW3 569 aaPredicted RBP20.28■□□□□ 0.84
LRRC28-202ENST00000331450 TMEM57Q8N5G2 664 aa20.28■□□□□ 0.84
LRRC28-202ENST00000331450 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.28■□□□□ 0.84
LRRC28-202ENST00000331450 SYT17Q9BSW7 474 aa20.28■□□□□ 0.84
LRRC28-202ENST00000331450 COL4A1P02462 1669 aa20.27■□□□□ 0.84
LRRC28-202ENST00000331450 IRS4O14654 1257 aaPredicted RBP20.27■□□□□ 0.84
LRRC28-202ENST00000331450 HCLS1P14317 486 aaPredicted RBP20.27■□□□□ 0.84
LRRC28-202ENST00000331450 PDE6BP35913 854 aa20.27■□□□□ 0.84
LRRC28-202ENST00000331450 TGFB2P61812 414 aa20.27■□□□□ 0.84
LRRC28-202ENST00000331450 CRY2Q49AN0 593 aa20.27■□□□□ 0.84
LRRC28-202ENST00000331450 C3orf67Q6ZVT6 689 aa20.27■□□□□ 0.84
LRRC28-202ENST00000331450 FTSJ3Q8IY81 847 aaKnown RBP20.27■□□□□ 0.84
LRRC28-202ENST00000331450 KLHL34Q8N239 644 aa20.27■□□□□ 0.84
LRRC28-202ENST00000331450 NLGN2Q8NFZ4 835 aa20.27■□□□□ 0.84
LRRC28-202ENST00000331450 JARID2Q92833 1246 aaPredicted RBP20.27■□□□□ 0.84
LRRC28-202ENST00000331450 USP44Q9H0E7 712 aa20.27■□□□□ 0.84
LRRC28-202ENST00000331450 SPEF2Q9C093 1822 aa20.26■□□□□ 0.83
LRRC28-202ENST00000331450 NBPF7P0C2Y1 421 aaPredicted RBP20.26■□□□□ 0.83
LRRC28-202ENST00000331450 MS4A1P11836 297 aa20.26■□□□□ 0.83
LRRC28-202ENST00000331450 PANK1Q8TE04 598 aa20.26■□□□□ 0.83
LRRC28-202ENST00000331450 PLA2G12BQ9BX93 195 aa20.26■□□□□ 0.83
LRRC28-202ENST00000331450 PDZRN3Q9UPQ7 1066 aa20.26■□□□□ 0.83
LRRC28-202ENST00000331450 KCNA3P22001 575 aa20.25■□□□□ 0.83
LRRC28-202ENST00000331450 PDE3AQ14432 1141 aa20.25■□□□□ 0.83
LRRC28-202ENST00000331450 C9orf78Q9NZ63 289 aaPredicted RBP20.25■□□□□ 0.83
LRRC28-202ENST00000331450 LRRC37AA6NMS7 1700 aa20.24■□□□□ 0.83
LRRC28-202ENST00000331450 PDE8AO60658 829 aa20.24■□□□□ 0.83
LRRC28-202ENST00000331450 SRGNP10124 158 aa20.24■□□□□ 0.83
LRRC28-202ENST00000331450 CHRNA5P30532 468 aa20.24■□□□□ 0.83
LRRC28-202ENST00000331450 C20orf194Q5TEA3 1177 aa20.24■□□□□ 0.83
LRRC28-202ENST00000331450 NLRP3Q96P20 1036 aa20.24■□□□□ 0.83
LRRC28-202ENST00000331450 SLX4Q8IY92 1834 aa20.24■□□□□ 0.83
LRRC28-202ENST00000331450 HSP90B1P14625 803 aaKnown RBP20.23■□□□□ 0.83
LRRC28-202ENST00000331450 DPEP1P16444 411 aa20.23■□□□□ 0.83
LRRC28-202ENST00000331450 SF3B3Q15393 1217 aaKnown RBP20.23■□□□□ 0.83
LRRC28-202ENST00000331450 C2CD5Q86YS7 1000 aa20.23■□□□□ 0.83
LRRC28-202ENST00000331450 KAZALD1Q96I82 304 aa20.23■□□□□ 0.83
LRRC28-202ENST00000331450 MEIS3Q99687 375 aa20.23■□□□□ 0.83
LRRC28-202ENST00000331450 A0A0G2JLW4 131 aa20.22■□□□□ 0.83
LRRC28-202ENST00000331450 RTL9Q8NET4 1388 aa20.21■□□□□ 0.83
LRRC28-202ENST00000331450 A0A1B0GUL6 1792 aa20.21■□□□□ 0.83
LRRC28-202ENST00000331450 H0YIN7 160 aa20.21■□□□□ 0.83
LRRC28-202ENST00000331450 HOXA10P31260 410 aaPredicted RBP20.21■□□□□ 0.83
LRRC28-202ENST00000331450 CTSWP56202 376 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms