RNA–Protein interactions for RNA: ENST00000329654.8

PDE4B-201, Transcript of phosphodiesterase 4B, humanhuman

TSL 1 (best) BASIC

Gene PDE4B, Length 3,998 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4B-201ENST00000329654 UBR2Q8IWV8 1755 aa6.27□□□□□ -1.41
PDE4B-201ENST00000329654 PDE3AQ14432 1141 aa6.27□□□□□ -1.41
PDE4B-201ENST00000329654 MBIPQ9NS73 344 aa6.27□□□□□ -1.41
PDE4B-201ENST00000329654 SPG7Q9UQ90 795 aa6.27□□□□□ -1.41
PDE4B-201ENST00000329654 MTMR7Q9Y216 660 aa6.27□□□□□ -1.41
PDE4B-201ENST00000329654 PDZRN3Q9UPQ7 1066 aa6.27□□□□□ -1.41
PDE4B-201ENST00000329654 SLC4A2P04920 1241 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 EN1Q05925 392 aaPredicted RBP6.26□□□□□ -1.41
PDE4B-201ENST00000329654 EXOSC9Q06265 439 aaKnown RBP6.26□□□□□ -1.41
PDE4B-201ENST00000329654 CTR9Q6PD62 1173 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 KCTD17Q8N5Z5 321 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 USHBP1Q8N6Y0 703 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 IL17REQ8NFR9 667 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 TNNQ9UQP3 1299 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 IPO8O15397 1037 aaKnown RBP6.26□□□□□ -1.41
PDE4B-201ENST00000329654 VAMP4O75379 141 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 DEFB132Q7Z7B7 95 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 TSR2Q969E8 191 aaKnown RBP6.26□□□□□ -1.41
PDE4B-201ENST00000329654 FAM210AQ96ND0 272 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 UQCRHLA0A096LP55 91 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 UQCRHP07919 91 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 HSP90AB1P08238 724 aaKnown RBP6.26□□□□□ -1.41
PDE4B-201ENST00000329654 GTF2A1P52655 376 aaPredicted RBP6.26□□□□□ -1.41
PDE4B-201ENST00000329654 RIPOR2Q9Y4F9 1068 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 GLI3P10071 1580 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 TOGARAM1Q9Y4F4 1720 aa6.26□□□□□ -1.41
PDE4B-201ENST00000329654 HEG1Q9ULI3 1381 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 ZC3H12AQ5D1E8 599 aaKnown RBP6.25□□□□□ -1.41
PDE4B-201ENST00000329654 MCM10Q7L590 875 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 SDR16C5Q8N3Y7 309 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 ZCRB1Q8TBF4 217 aaKnown RBP6.25□□□□□ -1.41
PDE4B-201ENST00000329654 THUMPD2Q9BTF0 503 aaKnown RBP6.25□□□□□ -1.41
PDE4B-201ENST00000329654 FOXD4L5Q5VV16 416 aaPredicted RBP6.25□□□□□ -1.41
PDE4B-201ENST00000329654 FOXD4L4Q8WXT5 416 aaPredicted RBP6.25□□□□□ -1.41
PDE4B-201ENST00000329654 RTF1Q92541 710 aaKnown RBP6.25□□□□□ -1.41
PDE4B-201ENST00000329654 SMARCC1Q92922 1105 aaPredicted RBP6.25□□□□□ -1.41
PDE4B-201ENST00000329654 SPON1Q9HCB6 807 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 BRMS1Q9HCU9 246 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 LAMB4A4D0S4 1761 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 KDM6AO15550 1401 aaPredicted RBP6.25□□□□□ -1.41
PDE4B-201ENST00000329654 MRE11P49959 708 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 DCTN1Q14203 1278 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 HSCBQ8IWL3 235 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 MSL3Q8N5Y2 521 aaKnown RBP6.25□□□□□ -1.41
PDE4B-201ENST00000329654 NBPF3Q9H094 633 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 MPHOSPH10O00566 681 aaKnown RBP6.25□□□□□ -1.41
PDE4B-201ENST00000329654 SCP2P22307 547 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 CALRP27797 417 aaKnown RBP6.25□□□□□ -1.41
PDE4B-201ENST00000329654 CBX1P83916 185 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 NKX1-1Q15270 411 aaPredicted RBP6.25□□□□□ -1.41
PDE4B-201ENST00000329654 ZKSCAN2Q63HK3 967 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 ZNF771Q7L3S4 317 aaPredicted RBP6.25□□□□□ -1.41
PDE4B-201ENST00000329654 ARHGAP45Q92619 1136 aa6.25□□□□□ -1.41
PDE4B-201ENST00000329654 RNMTO43148 476 aaKnown RBP6.24□□□□□ -1.41
PDE4B-201ENST00000329654 TDO2P48775 406 aa6.24□□□□□ -1.41
PDE4B-201ENST00000329654 TAF7Q15545 349 aaPredicted RBP6.24□□□□□ -1.41
PDE4B-201ENST00000329654 C1orf141Q5JVX7 400 aa6.24□□□□□ -1.41
PDE4B-201ENST00000329654 DDX46Q7L014 1031 aaKnown RBP6.24□□□□□ -1.41
PDE4B-201ENST00000329654 MNS1Q8NEH6 495 aa6.24□□□□□ -1.41
PDE4B-201ENST00000329654 PAIP2Q9BPZ3 127 aaKnown RBP6.24□□□□□ -1.41
PDE4B-201ENST00000329654 PANK2Q9BZ23 570 aa6.24□□□□□ -1.41
PDE4B-201ENST00000329654 PCDHB15Q9Y5E8 787 aa6.24□□□□□ -1.41
PDE4B-201ENST00000329654 ITGB4P16144 1822 aa6.24□□□□□ -1.41
PDE4B-201ENST00000329654 CICQ96RK0 1608 aaPredicted RBP6.24□□□□□ -1.41
PDE4B-201ENST00000329654 RLBP1P12271 317 aa6.24□□□□□ -1.41
PDE4B-201ENST00000329654 PHKG2P15735 406 aa6.24□□□□□ -1.41
PDE4B-201ENST00000329654 DZIP1LQ8IYY4 767 aaKnown RBP6.24□□□□□ -1.41
PDE4B-201ENST00000329654 C5P01031 1676 aa6.24□□□□□ -1.41
PDE4B-201ENST00000329654 KLHL33A6NCF5 533 aa6.24□□□□□ -1.41
PDE4B-201ENST00000329654 HOXB7P09629 217 aa6.24□□□□□ -1.41
PDE4B-201ENST00000329654 NOP2P46087 812 aaKnown RBP6.24□□□□□ -1.41
PDE4B-201ENST00000329654 R3HDM1Q15032 1099 aaKnown RBP6.24□□□□□ -1.41
PDE4B-201ENST00000329654 ZNF530Q6P9A1 599 aaPredicted RBP6.24□□□□□ -1.41
PDE4B-201ENST00000329654 MED4Q9NPJ6 270 aa6.24□□□□□ -1.41
PDE4B-201ENST00000329654 CALCOCO1Q9P1Z2 691 aa6.24□□□□□ -1.41
PDE4B-201ENST00000329654 FEZ2Q9UHY8 353 aaPredicted RBP6.24□□□□□ -1.41
PDE4B-201ENST00000329654 ISY1Q9ULR0 285 aaKnown RBP6.24□□□□□ -1.41
PDE4B-201ENST00000329654 COQ9O75208 318 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 FAM182BQ5T319 152 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 MRPL50Q8N5N7 158 aaKnown RBP6.23□□□□□ -1.41
PDE4B-201ENST00000329654 C8orf58Q8NAV2 365 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 SSH1Q8WYL5 1049 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 NUB1Q9Y5A7 615 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 CCDC189A1A4V9 331 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 TWISTNBQ3B726 338 aaPredicted RBP6.23□□□□□ -1.41
PDE4B-201ENST00000329654 NME8Q8N427 588 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 FLAD1Q8NFF5 587 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 C22orf23Q9BZE7 217 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 C1orf115Q9H7X2 142 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 THSD7AQ9UPZ6 1657 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 GOLGA6CA6NDK9 693 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 GOLGA6BA6NDN3 693 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 GOLGA6DP0CG33 693 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 TNNT3P45378 269 aaPredicted RBP6.23□□□□□ -1.41
PDE4B-201ENST00000329654 IFNL2Q8IZJ0 200 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 TSPYL6Q8N831 410 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 TBC1D2Q9BYX2 928 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 GOLGA6AQ9NYA3 693 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 PCDH11XQ9BZA7 1347 aa6.23□□□□□ -1.41
PDE4B-201ENST00000329654 PCDH11YQ9BZA8 1340 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms