RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 HSP90AA4PQ58FG1 418 aa17.91■□□□□ 0.46
VARS2-201ENST00000321897 DHX16O60231 1041 aaKnown RBP17.9■□□□□ 0.46
VARS2-201ENST00000321897 PTGS1P23219 599 aa17.9■□□□□ 0.46
VARS2-201ENST00000321897 HS1BP3Q53T59 392 aa17.9■□□□□ 0.46
VARS2-201ENST00000321897 TMX1Q9H3N1 280 aa17.9■□□□□ 0.46
VARS2-201ENST00000321897 SYT1P21579 422 aa17.9■□□□□ 0.46
VARS2-201ENST00000321897 SETD1BQ9UPS6 1966 aaKnown RBP17.9■□□□□ 0.46
VARS2-201ENST00000321897 MAP3K5Q99683 1374 aa17.9■□□□□ 0.46
VARS2-201ENST00000321897 HELBQ8NG08 1087 aaPredicted RBP17.9■□□□□ 0.46
VARS2-201ENST00000321897 ROBO2Q9HCK4 1378 aa17.9■□□□□ 0.46
VARS2-201ENST00000321897 ZSCAN22P10073 491 aaPredicted RBP17.89■□□□□ 0.46
VARS2-201ENST00000321897 ZNF445P59923 1031 aa17.89■□□□□ 0.46
VARS2-201ENST00000321897 CLIP2Q9UDT6 1046 aa17.89■□□□□ 0.46
VARS2-201ENST00000321897 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.46
VARS2-201ENST00000321897 RIOK3O14730 519 aaKnown RBP17.89■□□□□ 0.45
VARS2-201ENST00000321897 ZNF594Q96JF6 807 aaPredicted RBP17.88■□□□□ 0.45
VARS2-201ENST00000321897 ZSCAN31Q96LW9 406 aaPredicted RBP17.88■□□□□ 0.45
VARS2-201ENST00000321897 MPHOSPH8Q99549 860 aa17.88■□□□□ 0.45
VARS2-201ENST00000321897 TFCP2Q12800 502 aa17.88■□□□□ 0.45
VARS2-201ENST00000321897 ANKRD1Q15327 319 aa17.88■□□□□ 0.45
VARS2-201ENST00000321897 PHF23Q9BUL5 403 aaPredicted RBP17.88■□□□□ 0.45
VARS2-201ENST00000321897 TBC1D2BQ9UPU7 963 aa17.88■□□□□ 0.45
VARS2-201ENST00000321897 AKAP4Q5JQC9 854 aa17.88■□□□□ 0.45
VARS2-201ENST00000321897 IFNL2Q8IZJ0 200 aa17.88■□□□□ 0.45
VARS2-201ENST00000321897 ERICH2A1L162 156 aa17.88■□□□□ 0.45
VARS2-201ENST00000321897 RXRAP19793 462 aa17.87■□□□□ 0.45
VARS2-201ENST00000321897 MYRIPQ8NFW9 859 aa17.87■□□□□ 0.45
VARS2-201ENST00000321897 GPT2Q8TD30 523 aa17.87■□□□□ 0.45
VARS2-201ENST00000321897 SUCLG2Q96I99 432 aa17.87■□□□□ 0.45
VARS2-201ENST00000321897 BCL2L12Q9HB09 334 aa17.87■□□□□ 0.45
VARS2-201ENST00000321897 DACT1Q9NYF0 836 aa17.87■□□□□ 0.45
VARS2-201ENST00000321897 RNMTO43148 476 aaKnown RBP17.86■□□□□ 0.45
VARS2-201ENST00000321897 VPS53Q5VIR6 699 aa17.86■□□□□ 0.45
VARS2-201ENST00000321897 NEK1Q96PY6 1258 aa17.86■□□□□ 0.45
VARS2-201ENST00000321897 LINS1Q8NG48 757 aa17.86■□□□□ 0.45
VARS2-201ENST00000321897 MINDY4BA8MYZ0 360 aa17.86■□□□□ 0.45
VARS2-201ENST00000321897 IP6K1Q92551 441 aa17.86■□□□□ 0.45
VARS2-201ENST00000321897 ERCC4Q92889 916 aaPredicted RBP17.86■□□□□ 0.45
VARS2-201ENST00000321897 RASEFQ8IZ41 740 aa17.85■□□□□ 0.45
VARS2-201ENST00000321897 DBNDD2Q9BQY9 259 aa17.85■□□□□ 0.45
VARS2-201ENST00000321897 SNX14Q9Y5W7 946 aa17.85■□□□□ 0.45
VARS2-201ENST00000321897 PTH1RQ03431 593 aa17.85■□□□□ 0.45
VARS2-201ENST00000321897 LDHAL6AQ6ZMR3 332 aa17.85■□□□□ 0.45
VARS2-201ENST00000321897 A1BGP04217 495 aa17.85■□□□□ 0.45
VARS2-201ENST00000321897 SNRPA1P09661 255 aaKnown RBP17.85■□□□□ 0.45
VARS2-201ENST00000321897 SAFBQ15424 915 aaKnown RBP eCLIP17.85■□□□□ 0.45
VARS2-201ENST00000321897 CREB3L3Q68CJ9 461 aa17.85■□□□□ 0.45
VARS2-201ENST00000321897 MICU3Q86XE3 530 aa17.85■□□□□ 0.45
VARS2-201ENST00000321897 ZNF496Q96IT1 587 aaPredicted RBP17.85■□□□□ 0.45
VARS2-201ENST00000321897 TMOD3Q9NYL9 352 aa17.85■□□□□ 0.45
VARS2-201ENST00000321897 USP16Q9Y5T5 823 aa17.85■□□□□ 0.45
VARS2-201ENST00000321897 CLSTN1O94985 981 aa17.84■□□□□ 0.45
VARS2-201ENST00000321897 ZNF165P49910 485 aa17.84■□□□□ 0.45
VARS2-201ENST00000321897 UBXN4Q92575 508 aa17.84■□□□□ 0.45
VARS2-201ENST00000321897 SEC62Q99442 399 aaKnown RBP17.84■□□□□ 0.45
VARS2-201ENST00000321897 TRMT112Q9UI30 125 aaKnown RBP17.84■□□□□ 0.45
VARS2-201ENST00000321897 ZNF853P0CG23 659 aa17.84■□□□□ 0.45
VARS2-201ENST00000321897 Q6ZUG5 572 aa17.84■□□□□ 0.45
VARS2-201ENST00000321897 NSFL1CQ9UNZ2 370 aaKnown RBP17.84■□□□□ 0.45
VARS2-201ENST00000321897 EIF4A1P60842 406 aaKnown RBP17.84■□□□□ 0.45
VARS2-201ENST00000321897 IQGAP3Q86VI3 1631 aa17.84■□□□□ 0.45
VARS2-201ENST00000321897 F13A1P00488 732 aa17.83■□□□□ 0.45
VARS2-201ENST00000321897 TDO2P48775 406 aa17.83■□□□□ 0.45
VARS2-201ENST00000321897 PIP4K2BP78356 416 aa17.83■□□□□ 0.45
VARS2-201ENST00000321897 LUZP1Q86V48 1076 aa17.83■□□□□ 0.45
VARS2-201ENST00000321897 NCOA5Q9HCD5 579 aaKnown RBP17.83■□□□□ 0.45
VARS2-201ENST00000321897 MARCH6O60337 910 aa17.83■□□□□ 0.45
VARS2-201ENST00000321897 GTPBP4Q9BZE4 634 aaKnown RBP17.83■□□□□ 0.45
VARS2-201ENST00000321897 TBX22Q9Y458 520 aa17.83■□□□□ 0.45
VARS2-201ENST00000321897 PLEKHG3A1L390 1219 aa17.83■□□□□ 0.44
VARS2-201ENST00000321897 ZNF500O60304 480 aaPredicted RBP17.83■□□□□ 0.44
VARS2-201ENST00000321897 IFIT5Q13325 482 aaKnown RBP17.83■□□□□ 0.44
VARS2-201ENST00000321897 OTUD7BQ6GQQ9 843 aa17.83■□□□□ 0.44
VARS2-201ENST00000321897 GOLGA8BA8MQT2 603 aa17.83■□□□□ 0.44
VARS2-201ENST00000321897 UBE2HP62256 183 aa17.83■□□□□ 0.44
VARS2-201ENST00000321897 APOBRQ0VD83 1088 aa17.83■□□□□ 0.44
VARS2-201ENST00000321897 LRP2BPQ9P2M1 347 aa17.83■□□□□ 0.44
VARS2-201ENST00000321897 TMEM2Q9UHN6 1383 aa17.82■□□□□ 0.44
VARS2-201ENST00000321897 G3V3G9 751 aa17.82■□□□□ 0.44
VARS2-201ENST00000321897 DCAF8Q5TAQ9 597 aa17.82■□□□□ 0.44
VARS2-201ENST00000321897 FAM89AQ96GI7 184 aa17.82■□□□□ 0.44
VARS2-201ENST00000321897 SH2B1Q9NRF2 756 aaPredicted RBP17.82■□□□□ 0.44
VARS2-201ENST00000321897 URI1O94763 535 aaPredicted RBP17.82■□□□□ 0.44
VARS2-201ENST00000321897 MYOM2P54296 1465 aa17.82■□□□□ 0.44
VARS2-201ENST00000321897 SGSM2O43147 1006 aa17.82■□□□□ 0.44
VARS2-201ENST00000321897 KIF18AQ8NI77 898 aa17.82■□□□□ 0.44
VARS2-201ENST00000321897 SBNO1A3KN83 1393 aa17.81■□□□□ 0.44
VARS2-201ENST00000321897 SERPINC1P01008 464 aa17.81■□□□□ 0.44
VARS2-201ENST00000321897 ADCK5Q3MIX3 580 aa17.81■□□□□ 0.44
VARS2-201ENST00000321897 AIDAQ96BJ3 306 aa17.81■□□□□ 0.44
VARS2-201ENST00000321897 TLR7Q9NYK1 1049 aaKnown RBP17.81■□□□□ 0.44
VARS2-201ENST00000321897 KRT32Q14532 448 aa17.81■□□□□ 0.44
VARS2-201ENST00000321897 CEP135Q66GS9 1140 aa17.81■□□□□ 0.44
VARS2-201ENST00000321897 ZNF790Q6PG37 636 aa17.81■□□□□ 0.44
VARS2-201ENST00000321897 EAF2Q96CJ1 260 aaPredicted RBP17.81■□□□□ 0.44
VARS2-201ENST00000321897 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
VARS2-201ENST00000321897 IMMTQ16891 758 aaKnown RBP17.81■□□□□ 0.44
VARS2-201ENST00000321897 HSP90B2PQ58FF3 399 aa17.81■□□□□ 0.44
VARS2-201ENST00000321897 FSIP1Q8NA03 581 aa17.81■□□□□ 0.44
VARS2-201ENST00000321897 ACSBG1Q96GR2 724 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms