RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 SSFA2P28290 1259 aa19.33■□□□□ 0.69
SHISA2-201ENST00000319420 PKD1L3Q7Z443 1732 aa19.33■□□□□ 0.68
SHISA2-201ENST00000319420 FSD1Q9BTV5 496 aa19.33■□□□□ 0.68
SHISA2-201ENST00000319420 STARD3NLO95772 234 aa19.32■□□□□ 0.68
SHISA2-201ENST00000319420 TIMM10P62072 90 aa19.32■□□□□ 0.68
SHISA2-201ENST00000319420 HLFQ16534 295 aa19.32■□□□□ 0.68
SHISA2-201ENST00000319420 ZBTB1Q9Y2K1 713 aa19.32■□□□□ 0.68
SHISA2-201ENST00000319420 KCNQ4P56696 695 aa19.32■□□□□ 0.68
SHISA2-201ENST00000319420 DBNDD2Q9BQY9 259 aa19.32■□□□□ 0.68
SHISA2-201ENST00000319420 SGSM2O43147 1006 aa19.31■□□□□ 0.68
SHISA2-201ENST00000319420 KCNJ4P48050 445 aa19.31■□□□□ 0.68
SHISA2-201ENST00000319420 DDB1Q16531 1140 aa19.31■□□□□ 0.68
SHISA2-201ENST00000319420 CHAMP1Q96JM3 812 aa19.31■□□□□ 0.68
SHISA2-201ENST00000319420 DBNLQ9UJU6 430 aaKnown RBP19.31■□□□□ 0.68
SHISA2-201ENST00000319420 ROBO1Q9Y6N7 1651 aa19.31■□□□□ 0.68
SHISA2-201ENST00000319420 TUBGCP6Q96RT7 1819 aa19.31■□□□□ 0.68
SHISA2-201ENST00000319420 TTC41PQ6P2S7 1318 aa19.31■□□□□ 0.68
SHISA2-201ENST00000319420 LRRC24Q50LG9 513 aa19.31■□□□□ 0.68
SHISA2-201ENST00000319420 KIF6Q6ZMV9 814 aa19.31■□□□□ 0.68
SHISA2-201ENST00000319420 PTH1RQ03431 593 aa19.3■□□□□ 0.68
SHISA2-201ENST00000319420 RAB3GAP1Q15042 981 aa19.3■□□□□ 0.68
SHISA2-201ENST00000319420 FOXD4L6Q3SYB3 417 aaPredicted RBP19.3■□□□□ 0.68
SHISA2-201ENST00000319420 FOXD4L3Q6VB84 417 aaPredicted RBP19.3■□□□□ 0.68
SHISA2-201ENST00000319420 C8orf37Q96NL8 207 aa19.3■□□□□ 0.68
SHISA2-201ENST00000319420 PUS3Q9BZE2 481 aaKnown RBP19.3■□□□□ 0.68
SHISA2-201ENST00000319420 AOX1Q06278 1338 aa19.3■□□□□ 0.68
SHISA2-201ENST00000319420 RFX5P48382 616 aaPredicted RBP19.3■□□□□ 0.68
SHISA2-201ENST00000319420 FOXO4P98177 505 aa19.3■□□□□ 0.68
SHISA2-201ENST00000319420 CASP7P55210 303 aa19.3■□□□□ 0.68
SHISA2-201ENST00000319420 RASEFQ8IZ41 740 aa19.3■□□□□ 0.68
SHISA2-201ENST00000319420 ABCC6O95255 1503 aa19.29■□□□□ 0.68
SHISA2-201ENST00000319420 TRAK2O60296 914 aa19.29■□□□□ 0.68
SHISA2-201ENST00000319420 SLFNL1Q499Z3 407 aa19.29■□□□□ 0.68
SHISA2-201ENST00000319420 TNNI3KQ59H18 835 aa19.29■□□□□ 0.68
SHISA2-201ENST00000319420 FPGT-TNNI3KV9GXZ4 949 aa19.29■□□□□ 0.68
SHISA2-201ENST00000319420 PARP4Q9UKK3 1724 aaKnown RBP19.29■□□□□ 0.68
SHISA2-201ENST00000319420 UBAP1LF5GYI3 381 aa19.29■□□□□ 0.68
SHISA2-201ENST00000319420 DDX46Q7L014 1031 aaKnown RBP19.29■□□□□ 0.68
SHISA2-201ENST00000319420 H7C1W4 665 aa19.28■□□□□ 0.68
SHISA2-201ENST00000319420 AK9Q5TCS8 1911 aa19.28■□□□□ 0.68
SHISA2-201ENST00000319420 ABCA3Q99758 1704 aa19.28■□□□□ 0.68
SHISA2-201ENST00000319420 NMIQ13287 307 aaPredicted RBP19.28■□□□□ 0.68
SHISA2-201ENST00000319420 FAM182BQ5T319 152 aa19.28■□□□□ 0.68
SHISA2-201ENST00000319420 PRPF40BQ6NWY9 871 aaKnown RBP19.28■□□□□ 0.68
SHISA2-201ENST00000319420 COPRSQ9NQ92 184 aa19.28■□□□□ 0.68
SHISA2-201ENST00000319420 CIZ1Q9ULV3 898 aaPredicted RBP19.28■□□□□ 0.68
SHISA2-201ENST00000319420 KCPQ6ZWJ8 1503 aa19.28■□□□□ 0.68
SHISA2-201ENST00000319420 FAM98CQ17RN3 349 aaKnown RBP19.27■□□□□ 0.68
SHISA2-201ENST00000319420 KCNQ2O43526 872 aa19.27■□□□□ 0.68
SHISA2-201ENST00000319420 TAF7LQ5H9L4 462 aa19.27■□□□□ 0.68
SHISA2-201ENST00000319420 EVI5LQ96CN4 794 aa19.27■□□□□ 0.68
SHISA2-201ENST00000319420 TMX3Q96JJ7 454 aa19.27■□□□□ 0.68
SHISA2-201ENST00000319420 NHSL1Q5SYE7 1610 aa19.27■□□□□ 0.67
SHISA2-201ENST00000319420 TCIRG1Q13488 830 aa19.26■□□□□ 0.67
SHISA2-201ENST00000319420 CCDC191Q8NCU4 936 aa19.26■□□□□ 0.67
SHISA2-201ENST00000319420 A0A0D9SFI3 127 aa19.26■□□□□ 0.67
SHISA2-201ENST00000319420 RABL6Q3YEC7 729 aaPredicted RBP19.26■□□□□ 0.67
SHISA2-201ENST00000319420 TPRNQ4KMQ1 711 aa19.26■□□□□ 0.67
SHISA2-201ENST00000319420 SMIM5Q71RC9 77 aa19.26■□□□□ 0.67
SHISA2-201ENST00000319420 LSG1Q9H089 658 aaKnown RBP19.26■□□□□ 0.67
SHISA2-201ENST00000319420 ERBB4Q15303 1308 aa19.25■□□□□ 0.67
SHISA2-201ENST00000319420 NGLY1Q96IV0 654 aa19.25■□□□□ 0.67
SHISA2-201ENST00000319420 CCDC57Q2TAC2 916 aa19.25■□□□□ 0.67
SHISA2-201ENST00000319420 TCEANC2Q96MN5 208 aa19.25■□□□□ 0.67
SHISA2-201ENST00000319420 ATP6V1AP38606 617 aa19.24■□□□□ 0.67
SHISA2-201ENST00000319420 CCDC129Q6ZRS4 1044 aa19.24■□□□□ 0.67
SHISA2-201ENST00000319420 MARCH10Q8NA82 808 aaPredicted RBP19.24■□□□□ 0.67
SHISA2-201ENST00000319420 SEC62Q99442 399 aaKnown RBP19.24■□□□□ 0.67
SHISA2-201ENST00000319420 SNX14Q9Y5W7 946 aa19.24■□□□□ 0.67
SHISA2-201ENST00000319420 RAD50Q92878 1312 aa19.24■□□□□ 0.67
SHISA2-201ENST00000319420 CYP19A1P11511 503 aaPredicted RBP19.24■□□□□ 0.67
SHISA2-201ENST00000319420 HSPA4P34932 840 aa19.24■□□□□ 0.67
SHISA2-201ENST00000319420 SNRKQ9NRH2 765 aa19.24■□□□□ 0.67
SHISA2-201ENST00000319420 TOM1O60784 492 aa19.23■□□□□ 0.67
SHISA2-201ENST00000319420 CASTP20810 708 aaKnown RBP19.23■□□□□ 0.67
SHISA2-201ENST00000319420 COL9A3Q14050 684 aaPredicted RBP19.23■□□□□ 0.67
SHISA2-201ENST00000319420 ADCK5Q3MIX3 580 aa19.23■□□□□ 0.67
SHISA2-201ENST00000319420 RUFY2Q8WXA3 655 aa19.23■□□□□ 0.67
SHISA2-201ENST00000319420 ZNF589Q86UQ0 364 aaPredicted RBP19.23■□□□□ 0.67
SHISA2-201ENST00000319420 TRMT112Q9UI30 125 aaKnown RBP19.23■□□□□ 0.67
SHISA2-201ENST00000319420 GLI3P10071 1580 aa19.22■□□□□ 0.67
SHISA2-201ENST00000319420 SPATA31A1Q5TZJ5 1347 aa19.22■□□□□ 0.67
SHISA2-201ENST00000319420 ATG9AQ7Z3C6 839 aa19.22■□□□□ 0.67
SHISA2-201ENST00000319420 DZIP3Q86Y13 1208 aaKnown RBP19.22■□□□□ 0.67
SHISA2-201ENST00000319420 USP42Q9H9J4 1324 aaKnown RBP19.22■□□□□ 0.67
SHISA2-201ENST00000319420 GOLIM4O00461 696 aa19.22■□□□□ 0.67
SHISA2-201ENST00000319420 JAKMIP1Q96N16 626 aaKnown RBP19.22■□□□□ 0.67
SHISA2-201ENST00000319420 TEX13AQ9BXU3 409 aaPredicted RBP19.22■□□□□ 0.67
SHISA2-201ENST00000319420 EP400Q96L91 3159 aa19.21■□□□□ 0.67
SHISA2-201ENST00000319420 AFDNP55196 1824 aaKnown RBP19.21■□□□□ 0.67
SHISA2-201ENST00000319420 GORABQ5T7V8 394 aa19.21■□□□□ 0.67
SHISA2-201ENST00000319420 TNS2Q63HR2 1409 aa19.21■□□□□ 0.67
SHISA2-201ENST00000319420 TOGARAM1Q9Y4F4 1720 aa19.21■□□□□ 0.67
SHISA2-201ENST00000319420 DDX11L8A8MPP1 907 aa19.21■□□□□ 0.67
SHISA2-201ENST00000319420 ISCA1Q9BUE6 129 aa19.21■□□□□ 0.67
SHISA2-201ENST00000319420 TAF6LQ9Y6J9 622 aa19.21■□□□□ 0.67
SHISA2-201ENST00000319420 BCL9O00512 1426 aa19.2■□□□□ 0.66
SHISA2-201ENST00000319420 MAP3K15Q6ZN16 1313 aa19.2■□□□□ 0.66
SHISA2-201ENST00000319420 FKBP4Q02790 459 aaKnown RBP eCLIP19.2■□□□□ 0.66
SHISA2-201ENST00000319420 MCTP1Q6DN14 999 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms