RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 IFT57Q9NWB7 429 aa12.22□□□□□ -0.45
KARS-202ENST00000319410 KDM3BQ7LBC6 1761 aa12.22□□□□□ -0.45
KARS-202ENST00000319410 ATP10DQ9P241 1426 aa12.22□□□□□ -0.45
KARS-202ENST00000319410 SERPINB2P05120 415 aa12.21□□□□□ -0.45
KARS-202ENST00000319410 ZNF853P0CG23 659 aa12.21□□□□□ -0.45
KARS-202ENST00000319410 TBC1D9BQ66K14 1250 aa12.21□□□□□ -0.45
KARS-202ENST00000319410 ARHGAP27Q6ZUM4 889 aa12.21□□□□□ -0.45
KARS-202ENST00000319410 AFDNP55196 1824 aaKnown RBP12.21□□□□□ -0.45
KARS-202ENST00000319410 GNAI1P63096 354 aa12.21□□□□□ -0.46
KARS-202ENST00000319410 SLC20A2Q08357 652 aa12.21□□□□□ -0.46
KARS-202ENST00000319410 FAM13BQ9NYF5 915 aa12.21□□□□□ -0.46
KARS-202ENST00000319410 CARMIL3Q8ND23 1372 aa12.21□□□□□ -0.46
KARS-202ENST00000319410 ZNF622Q969S3 477 aaKnown RBP eCLIP12.2□□□□□ -0.46
KARS-202ENST00000319410 KCNG1Q9UIX4 513 aa12.2□□□□□ -0.46
KARS-202ENST00000319410 HDAC5Q9UQL6 1122 aa12.2□□□□□ -0.46
KARS-202ENST00000319410 BRCA1P38398 1863 aaKnown RBP12.2□□□□□ -0.46
KARS-202ENST00000319410 SNRPA1P09661 255 aaKnown RBP12.2□□□□□ -0.46
KARS-202ENST00000319410 IL6STP40189 918 aaPredicted RBP12.2□□□□□ -0.46
KARS-202ENST00000319410 PIM2Q9P1W9 311 aa12.2□□□□□ -0.46
KARS-202ENST00000319410 GIGYF1O75420 1035 aaPredicted RBP12.19□□□□□ -0.46
KARS-202ENST00000319410 EIF4A1P60842 406 aaKnown RBP12.19□□□□□ -0.46
KARS-202ENST00000319410 TSPYL4Q9UJ04 414 aa12.19□□□□□ -0.46
KARS-202ENST00000319410 A0A087WZG4 1122 aa12.19□□□□□ -0.46
KARS-202ENST00000319410 NBPF26B4DH59 902 aa12.19□□□□□ -0.46
KARS-202ENST00000319410 NBPF10Q6P3W6 841 aaKnown RBP12.19□□□□□ -0.46
KARS-202ENST00000319410 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.19□□□□□ -0.46
KARS-202ENST00000319410 DZIP3Q86Y13 1208 aaKnown RBP12.19□□□□□ -0.46
KARS-202ENST00000319410 NBPF15Q8N660 670 aa12.19□□□□□ -0.46
KARS-202ENST00000319410 ZNF521Q96K83 1311 aa12.18□□□□□ -0.46
KARS-202ENST00000319410 SCN7AQ01118 1682 aa12.18□□□□□ -0.46
KARS-202ENST00000319410 FSD2A1L4K1 749 aa12.18□□□□□ -0.46
KARS-202ENST00000319410 CAMTA2O94983 1202 aa12.18□□□□□ -0.46
KARS-202ENST00000319410 APPP05067 770 aa12.18□□□□□ -0.46
KARS-202ENST00000319410 FAM193AP78312 1265 aa12.18□□□□□ -0.46
KARS-202ENST00000319410 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
KARS-202ENST00000319410 ADCY9O60503 1353 aa12.18□□□□□ -0.46
KARS-202ENST00000319410 CEP350Q5VT06 3117 aa12.18□□□□□ -0.46
KARS-202ENST00000319410 ZBED9Q6R2W3 1325 aa12.18□□□□□ -0.46
KARS-202ENST00000319410 C1QTNF8P60827 252 aa12.18□□□□□ -0.46
KARS-202ENST00000319410 DNAJC2Q99543 621 aaKnown RBP12.18□□□□□ -0.46
KARS-202ENST00000319410 CCDC94Q9BW85 323 aaPredicted RBP12.18□□□□□ -0.46
KARS-202ENST00000319410 MYH16Q9H6N6 1097 aa12.18□□□□□ -0.46
KARS-202ENST00000319410 PRDM10Q9NQV6 1147 aa12.18□□□□□ -0.46
KARS-202ENST00000319410 HOXB7P09629 217 aa12.17□□□□□ -0.46
KARS-202ENST00000319410 MRE11P49959 708 aa12.17□□□□□ -0.46
KARS-202ENST00000319410 GPBP1L1Q9HC44 474 aaPredicted RBP12.17□□□□□ -0.46
KARS-202ENST00000319410 NRXN2Q9P2S2 1712 aa12.17□□□□□ -0.46
KARS-202ENST00000319410 OFD1O75665 1012 aa12.17□□□□□ -0.46
KARS-202ENST00000319410 RNF123Q5XPI4 1314 aa12.16□□□□□ -0.46
KARS-202ENST00000319410 C2CD5Q86YS7 1000 aa12.16□□□□□ -0.46
KARS-202ENST00000319410 FAM177BA6PVY3 158 aa12.16□□□□□ -0.46
KARS-202ENST00000319410 NPHP1O15259 732 aa12.16□□□□□ -0.46
KARS-202ENST00000319410 PRR5LQ6MZQ0 368 aa12.16□□□□□ -0.46
KARS-202ENST00000319410 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
KARS-202ENST00000319410 SETDB2Q96T68 719 aa12.15□□□□□ -0.46
KARS-202ENST00000319410 MBIPQ9NS73 344 aa12.15□□□□□ -0.46
KARS-202ENST00000319410 ZNF219Q9P2Y4 722 aaPredicted RBP12.15□□□□□ -0.46
KARS-202ENST00000319410 TAOK2Q9UL54 1235 aa12.15□□□□□ -0.46
KARS-202ENST00000319410 ISY1Q9ULR0 285 aaKnown RBP12.15□□□□□ -0.46
KARS-202ENST00000319410 GRIPAP1Q4V328 841 aa12.15□□□□□ -0.47
KARS-202ENST00000319410 ARFGEF1Q9Y6D6 1849 aa12.14□□□□□ -0.47
KARS-202ENST00000319410 BCORQ6W2J9 1755 aa12.14□□□□□ -0.47
KARS-202ENST00000319410 ANKRD31Q8N7Z5 1873 aa12.14□□□□□ -0.47
KARS-202ENST00000319410 SENP3-EIF4A1A0A087X0R7 540 aa12.14□□□□□ -0.47
KARS-202ENST00000319410 MYL6BP14649 208 aa12.14□□□□□ -0.47
KARS-202ENST00000319410 RASSF7Q02833 373 aa12.14□□□□□ -0.47
KARS-202ENST00000319410 C9orf131Q5VYM1 1079 aa12.14□□□□□ -0.47
KARS-202ENST00000319410 LAMB4A4D0S4 1761 aa12.14□□□□□ -0.47
KARS-202ENST00000319410 H0YIN7 160 aa12.13□□□□□ -0.47
KARS-202ENST00000319410 DYNC1I1O14576 645 aa12.13□□□□□ -0.47
KARS-202ENST00000319410 HLFQ16534 295 aa12.13□□□□□ -0.47
KARS-202ENST00000319410 CNBD1Q8NA66 436 aa12.13□□□□□ -0.47
KARS-202ENST00000319410 ARID3AQ99856 593 aa12.13□□□□□ -0.47
KARS-202ENST00000319410 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
KARS-202ENST00000319410 RNF181Q9P0P0 153 aa12.12□□□□□ -0.47
KARS-202ENST00000319410 COL11A2P13942 1736 aaPredicted RBP12.12□□□□□ -0.47
KARS-202ENST00000319410 E9PSI1 815 aa12.12□□□□□ -0.47
KARS-202ENST00000319410 RGL2O15211 777 aa12.12□□□□□ -0.47
KARS-202ENST00000319410 TTLL7Q6ZT98 887 aa12.12□□□□□ -0.47
KARS-202ENST00000319410 NBPF5PQ86XG9 351 aaPredicted RBP12.12□□□□□ -0.47
KARS-202ENST00000319410 TTLL6Q8N841 843 aa12.12□□□□□ -0.47
KARS-202ENST00000319410 NECTIN2Q92692 538 aa12.12□□□□□ -0.47
KARS-202ENST00000319410 NIP7Q9Y221 180 aaKnown RBP eCLIP12.12□□□□□ -0.47
KARS-202ENST00000319410 PATL2C9JE40 543 aaKnown RBP12.11□□□□□ -0.47
KARS-202ENST00000319410 ANXA1P04083 346 aa12.11□□□□□ -0.47
KARS-202ENST00000319410 EIF2S2P20042 333 aaKnown RBP12.11□□□□□ -0.47
KARS-202ENST00000319410 SLC4A3P48751 1232 aa12.11□□□□□ -0.47
KARS-202ENST00000319410 KRT24Q2M2I5 525 aa12.11□□□□□ -0.47
KARS-202ENST00000319410 TICAM2Q86XR7 235 aa12.11□□□□□ -0.47
KARS-202ENST00000319410 BRIP1Q9BX63 1249 aa12.11□□□□□ -0.47
KARS-202ENST00000319410 DLEC1Q9Y238 1755 aa12.11□□□□□ -0.47
KARS-202ENST00000319410 PSEN1P49768 467 aa12.11□□□□□ -0.47
KARS-202ENST00000319410 PRELPP51888 382 aa12.11□□□□□ -0.47
KARS-202ENST00000319410 ZBTB3Q9H5J0 574 aa12.11□□□□□ -0.47
KARS-202ENST00000319410 PDE6BP35913 854 aa12.1□□□□□ -0.47
KARS-202ENST00000319410 YY1AP1Q9H869 796 aa12.1□□□□□ -0.47
KARS-202ENST00000319410 NMRK2Q9NPI5 230 aa12.1□□□□□ -0.47
KARS-202ENST00000319410 ZNF652Q9Y2D9 606 aa12.1□□□□□ -0.47
KARS-202ENST00000319410 C21orf2O43822 256 aa12.1□□□□□ -0.47
KARS-202ENST00000319410 ST5P78524 1137 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms