RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 SNRKQ9NRH2 765 aa16.87■□□□□ 0.29
VAMP2-201ENST00000316509 PLCH1Q4KWH8 1693 aa16.87■□□□□ 0.29
VAMP2-201ENST00000316509 FOXO4P98177 505 aa16.87■□□□□ 0.29
VAMP2-201ENST00000316509 SKOR2Q2VWA4 1001 aaPredicted RBP16.87■□□□□ 0.29
VAMP2-201ENST00000316509 AFDNP55196 1824 aaKnown RBP16.86■□□□□ 0.29
VAMP2-201ENST00000316509 ATP5JP18859 108 aa16.86■□□□□ 0.29
VAMP2-201ENST00000316509 TCIRG1Q13488 830 aa16.86■□□□□ 0.29
VAMP2-201ENST00000316509 INTS4Q96HW7 963 aaKnown RBP16.86■□□□□ 0.29
VAMP2-201ENST00000316509 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
VAMP2-201ENST00000316509 AK9Q5TCS8 1911 aa16.85■□□□□ 0.29
VAMP2-201ENST00000316509 MAP4K4O95819 1239 aaPredicted RBP16.85■□□□□ 0.29
VAMP2-201ENST00000316509 RFX7Q2KHR2 1363 aa16.85■□□□□ 0.29
VAMP2-201ENST00000316509 NUP188Q5SRE5 1749 aa16.85■□□□□ 0.29
VAMP2-201ENST00000316509 CUL4AQ13619 759 aa16.85■□□□□ 0.29
VAMP2-201ENST00000316509 KIF6Q6ZMV9 814 aa16.85■□□□□ 0.29
VAMP2-201ENST00000316509 KCNB2Q92953 911 aa16.85■□□□□ 0.29
VAMP2-201ENST00000316509 CCDC8Q9H0W5 538 aaPredicted RBP16.85■□□□□ 0.29
VAMP2-201ENST00000316509 TOGARAM1Q9Y4F4 1720 aa16.85■□□□□ 0.29
VAMP2-201ENST00000316509 BCL9O00512 1426 aa16.84■□□□□ 0.29
VAMP2-201ENST00000316509 HSP90AB3PQ58FF7 597 aa16.84■□□□□ 0.29
VAMP2-201ENST00000316509 TNNI3KQ59H18 835 aa16.84■□□□□ 0.29
VAMP2-201ENST00000316509 LMBR1LQ6UX01 489 aa16.84■□□□□ 0.29
VAMP2-201ENST00000316509 SIL1Q9H173 461 aa16.84■□□□□ 0.29
VAMP2-201ENST00000316509 FPGT-TNNI3KV9GXZ4 949 aa16.84■□□□□ 0.29
VAMP2-201ENST00000316509 GOLGA6L22H0YM25 854 aa16.84■□□□□ 0.29
VAMP2-201ENST00000316509 CIAO1O76071 339 aa16.84■□□□□ 0.29
VAMP2-201ENST00000316509 CWC27Q6UX04 472 aaKnown RBP16.84■□□□□ 0.29
VAMP2-201ENST00000316509 IL15P40933 162 aaPredicted RBP16.83■□□□□ 0.28
VAMP2-201ENST00000316509 PLA2G12BQ9BX93 195 aa16.83■□□□□ 0.28
VAMP2-201ENST00000316509 PALD1Q9ULE6 856 aa16.83■□□□□ 0.28
VAMP2-201ENST00000316509 TRAK2O60296 914 aa16.82■□□□□ 0.28
VAMP2-201ENST00000316509 TMX3Q96JJ7 454 aa16.82■□□□□ 0.28
VAMP2-201ENST00000316509 TM6SF1Q9BZW5 370 aa16.82■□□□□ 0.28
VAMP2-201ENST00000316509 ASAP1Q9ULH1 1129 aa16.82■□□□□ 0.28
VAMP2-201ENST00000316509 COL16A1Q07092 1604 aaPredicted RBP16.82■□□□□ 0.28
VAMP2-201ENST00000316509 CYP2E1P05181 493 aaPredicted RBP16.82■□□□□ 0.28
VAMP2-201ENST00000316509 DNAJC10Q8IXB1 793 aa16.82■□□□□ 0.28
VAMP2-201ENST00000316509 PCCAP05165 728 aaPredicted RBP16.81■□□□□ 0.28
VAMP2-201ENST00000316509 TFCP2Q12800 502 aa16.81■□□□□ 0.28
VAMP2-201ENST00000316509 ZBTB3Q9H5J0 574 aa16.81■□□□□ 0.28
VAMP2-201ENST00000316509 KLHDC4Q8TBB5 520 aa16.81■□□□□ 0.28
VAMP2-201ENST00000316509 IL25Q9H293 177 aa16.81■□□□□ 0.28
VAMP2-201ENST00000316509 FOXD4L1Q9NU39 408 aa16.81■□□□□ 0.28
VAMP2-201ENST00000316509 SNX14Q9Y5W7 946 aa16.81■□□□□ 0.28
VAMP2-201ENST00000316509 MAP3K15Q6ZN16 1313 aa16.8■□□□□ 0.28
VAMP2-201ENST00000316509 EYA2O00167 538 aa16.79■□□□□ 0.28
VAMP2-201ENST00000316509 TOM1O60784 492 aa16.79■□□□□ 0.28
VAMP2-201ENST00000316509 GIGYF2Q6Y7W6 1299 aaKnown RBP16.79■□□□□ 0.28
VAMP2-201ENST00000316509 JARID2Q92833 1246 aaPredicted RBP16.79■□□□□ 0.28
VAMP2-201ENST00000316509 BOLA2Q9H3K6 86 aa16.79■□□□□ 0.28
VAMP2-201ENST00000316509 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
VAMP2-201ENST00000316509 CYP19A1P11511 503 aaPredicted RBP16.79■□□□□ 0.28
VAMP2-201ENST00000316509 ZBTB38Q8NAP3 1195 aaPredicted RBP16.79■□□□□ 0.28
VAMP2-201ENST00000316509 FSD1Q9BTV5 496 aa16.79■□□□□ 0.28
VAMP2-201ENST00000316509 DBNLQ9UJU6 430 aaKnown RBP16.79■□□□□ 0.28
VAMP2-201ENST00000316509 ISY1Q9ULR0 285 aaKnown RBP16.79■□□□□ 0.28
VAMP2-201ENST00000316509 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.79■□□□□ 0.28
VAMP2-201ENST00000316509 SPATA31A1Q5TZJ5 1347 aa16.79■□□□□ 0.28
VAMP2-201ENST00000316509 CDHR2Q9BYE9 1310 aa16.79■□□□□ 0.28
VAMP2-201ENST00000316509 ERVV-1B6SEH8 477 aa16.78■□□□□ 0.28
VAMP2-201ENST00000316509 ZKSCAN1P17029 563 aaPredicted RBP16.78■□□□□ 0.28
VAMP2-201ENST00000316509 L1TD1Q5T7N2 865 aaKnown RBP16.78■□□□□ 0.28
VAMP2-201ENST00000316509 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.78■□□□□ 0.28
VAMP2-201ENST00000316509 MAP4K1Q92918 833 aa16.78■□□□□ 0.28
VAMP2-201ENST00000316509 HAUS7Q99871 368 aa16.78■□□□□ 0.28
VAMP2-201ENST00000316509 TLR7Q9NYK1 1049 aaKnown RBP16.78■□□□□ 0.28
VAMP2-201ENST00000316509 CCDC171Q6TFL3 1326 aa16.78■□□□□ 0.28
VAMP2-201ENST00000316509 NECTIN1Q15223 517 aa16.78■□□□□ 0.28
VAMP2-201ENST00000316509 ATG9AQ7Z3C6 839 aa16.78■□□□□ 0.28
VAMP2-201ENST00000316509 ITGB4P16144 1822 aa16.77■□□□□ 0.28
VAMP2-201ENST00000316509 TJP1Q07157 1748 aa16.77■□□□□ 0.28
VAMP2-201ENST00000316509 CSF1RP07333 972 aa16.77■□□□□ 0.28
VAMP2-201ENST00000316509 SSFA2P28290 1259 aa16.77■□□□□ 0.28
VAMP2-201ENST00000316509 IL6STP40189 918 aaPredicted RBP16.77■□□□□ 0.28
VAMP2-201ENST00000316509 RNF20Q5VTR2 975 aa16.77■□□□□ 0.28
VAMP2-201ENST00000316509 CHMP3Q9Y3E7 222 aa16.77■□□□□ 0.28
VAMP2-201ENST00000316509 WNK3Q9BYP7 1800 aa16.77■□□□□ 0.27
VAMP2-201ENST00000316509 BAG4O95429 457 aaKnown RBP16.77■□□□□ 0.27
VAMP2-201ENST00000316509 PSMA5P28066 241 aa16.77■□□□□ 0.27
VAMP2-201ENST00000316509 NMIQ13287 307 aaPredicted RBP16.77■□□□□ 0.27
VAMP2-201ENST00000316509 BARGINQ6ZT62 677 aa16.77■□□□□ 0.27
VAMP2-201ENST00000316509 TTC14Q96N46 770 aa16.77■□□□□ 0.27
VAMP2-201ENST00000316509 CCDC57Q2TAC2 916 aa16.76■□□□□ 0.27
VAMP2-201ENST00000316509 VPS53Q5VIR6 699 aa16.76■□□□□ 0.27
VAMP2-201ENST00000316509 ZSCAN31Q96LW9 406 aaPredicted RBP16.76■□□□□ 0.27
VAMP2-201ENST00000316509 HMG20BQ9P0W2 317 aa16.76■□□□□ 0.27
VAMP2-201ENST00000316509 AKAP2Q9Y2D5 859 aa16.76■□□□□ 0.27
VAMP2-201ENST00000316509 DDB1Q16531 1140 aa16.75■□□□□ 0.27
VAMP2-201ENST00000316509 TSGA10IPQ3SY00 556 aa16.75■□□□□ 0.27
VAMP2-201ENST00000316509 ZSWIM6Q9HCJ5 1215 aa16.75■□□□□ 0.27
VAMP2-201ENST00000316509 LIMCH1Q9UPQ0 1083 aa16.75■□□□□ 0.27
VAMP2-201ENST00000316509 PTH1RQ03431 593 aa16.75■□□□□ 0.27
VAMP2-201ENST00000316509 DBNDD2Q9BQY9 259 aa16.75■□□□□ 0.27
VAMP2-201ENST00000316509 ALDH8A1Q9H2A2 487 aaPredicted RBP16.75■□□□□ 0.27
VAMP2-201ENST00000316509 JCADQ9P266 1359 aa16.75■□□□□ 0.27
VAMP2-201ENST00000316509 MED23Q9ULK4 1368 aa16.75■□□□□ 0.27
VAMP2-201ENST00000316509 PDIA4P13667 645 aaKnown RBP16.74■□□□□ 0.27
VAMP2-201ENST00000316509 RASEFQ8IZ41 740 aa16.74■□□□□ 0.27
VAMP2-201ENST00000316509 ZGPATQ8N5A5 531 aaKnown RBP16.74■□□□□ 0.27
VAMP2-201ENST00000316509 AK7Q96M32 723 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms