RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ZNF594Q96JF6 807 aaPredicted RBP15.06■□□□□ 0
RNF4-201ENST00000314289 FAM227BQ96M60 508 aa15.06■□□□□ 0
RNF4-201ENST00000314289 TTC41PQ6P2S7 1318 aa15.06■□□□□ 0
RNF4-201ENST00000314289 RAB3GAP1Q15042 981 aa15.06■□□□□ 0
RNF4-201ENST00000314289 AFDNP55196 1824 aaKnown RBP15.05■□□□□ 0
RNF4-201ENST00000314289 RFX5P48382 616 aaPredicted RBP15.05■□□□□ 0
RNF4-201ENST00000314289 RASEFQ8IZ41 740 aa15.05■□□□□ 0
RNF4-201ENST00000314289 GPATCH3Q96I76 525 aa15.05■□□□□ 0
RNF4-201ENST00000314289 ATG3Q9NT62 314 aa15.05■□□□□ 0
RNF4-201ENST00000314289 PTH1RQ03431 593 aa15.05■□□□□ -0
RNF4-201ENST00000314289 KCPQ6ZWJ8 1503 aa15.05■□□□□ -0
RNF4-201ENST00000314289 TRAK2O60296 914 aa15.04■□□□□ -0
RNF4-201ENST00000314289 CASP7P55210 303 aa15.04■□□□□ -0
RNF4-201ENST00000314289 SYNE4Q8N205 404 aa15.04■□□□□ -0
RNF4-201ENST00000314289 CWC25Q9NXE8 425 aaPredicted RBP15.04■□□□□ -0
RNF4-201ENST00000314289 ARFGEF2Q9Y6D5 1785 aa15.04■□□□□ -0
RNF4-201ENST00000314289 NHSL1Q5SYE7 1610 aa15.04■□□□□ -0
RNF4-201ENST00000314289 KIAA1211Q6ZU35 1233 aa15.04■□□□□ -0
RNF4-201ENST00000314289 TMX3Q96JJ7 454 aa15.04■□□□□ -0
RNF4-201ENST00000314289 DBNLQ9UJU6 430 aaKnown RBP15.04■□□□□ -0
RNF4-201ENST00000314289 SHANK3Q9BYB0 1731 aa15.04■□□□□ -0
RNF4-201ENST00000314289 GPTP24298 496 aa15.03■□□□□ -0
RNF4-201ENST00000314289 LSG1Q9H089 658 aaKnown RBP15.03■□□□□ -0
RNF4-201ENST00000314289 FOXO4P98177 505 aa15.03■□□□□ -0
RNF4-201ENST00000314289 FAM89AQ96GI7 184 aa15.03■□□□□ -0
RNF4-201ENST00000314289 ACSBG1Q96GR2 724 aa15.03■□□□□ -0
RNF4-201ENST00000314289 SLC4A9Q96Q91 983 aa15.03■□□□□ -0
RNF4-201ENST00000314289 DBNDD2Q9BQY9 259 aa15.03■□□□□ -0
RNF4-201ENST00000314289 FSD1Q9BTV5 496 aa15.03■□□□□ -0
RNF4-201ENST00000314289 USP42Q9H9J4 1324 aaKnown RBP15.03■□□□□ -0
RNF4-201ENST00000314289 EXOC5O00471 708 aa15.02■□□□□ -0
RNF4-201ENST00000314289 HSPA4P34932 840 aa15.02■□□□□ -0
RNF4-201ENST00000314289 PRIM1P49642 420 aaKnown RBP15.02■□□□□ -0
RNF4-201ENST00000314289 NEUROD6Q96NK8 337 aa15.02■□□□□ -0
RNF4-201ENST00000314289 DNAJC2Q99543 621 aaKnown RBP15.02■□□□□ -0
RNF4-201ENST00000314289 ROBO1Q9Y6N7 1651 aa15.02■□□□□ -0
RNF4-201ENST00000314289 TOGARAM1Q9Y4F4 1720 aa15.02■□□□□ -0
RNF4-201ENST00000314289 NMIQ13287 307 aaPredicted RBP15.02□□□□□ -0.01
RNF4-201ENST00000314289 TNNI3KQ59H18 835 aa15.02□□□□□ -0.01
RNF4-201ENST00000314289 COPRSQ9NQ92 184 aa15.02□□□□□ -0.01
RNF4-201ENST00000314289 FPGT-TNNI3KV9GXZ4 949 aa15.02□□□□□ -0.01
RNF4-201ENST00000314289 FSD2A1L4K1 749 aa15.01□□□□□ -0.01
RNF4-201ENST00000314289 H7C1W4 665 aa15.01□□□□□ -0.01
RNF4-201ENST00000314289 TIMM10P62072 90 aa15.01□□□□□ -0.01
RNF4-201ENST00000314289 RABL6Q3YEC7 729 aaPredicted RBP15.01□□□□□ -0.01
RNF4-201ENST00000314289 LRRC24Q50LG9 513 aa15.01□□□□□ -0.01
RNF4-201ENST00000314289 PRPF40BQ6NWY9 871 aaKnown RBP15.01□□□□□ -0.01
RNF4-201ENST00000314289 RAD50Q92878 1312 aa15.01□□□□□ -0.01
RNF4-201ENST00000314289 CIZ1Q9ULV3 898 aaPredicted RBP15.01□□□□□ -0.01
RNF4-201ENST00000314289 SNX14Q9Y5W7 946 aa15.01□□□□□ -0.01
RNF4-201ENST00000314289 COL9A3Q14050 684 aaPredicted RBP15.01□□□□□ -0.01
RNF4-201ENST00000314289 FOXD4L6Q3SYB3 417 aaPredicted RBP15.01□□□□□ -0.01
RNF4-201ENST00000314289 FOXD4L3Q6VB84 417 aaPredicted RBP15.01□□□□□ -0.01
RNF4-201ENST00000314289 EVI5LQ96CN4 794 aa15.01□□□□□ -0.01
RNF4-201ENST00000314289 PUS3Q9BZE2 481 aaKnown RBP15.01□□□□□ -0.01
RNF4-201ENST00000314289 A0A0D9SFI3 127 aa15.01□□□□□ -0.01
RNF4-201ENST00000314289 HLFQ16534 295 aa15.01□□□□□ -0.01
RNF4-201ENST00000314289 SLFNL1Q499Z3 407 aa15.01□□□□□ -0.01
RNF4-201ENST00000314289 ADCK5Q3MIX3 580 aa15□□□□□ -0.01
RNF4-201ENST00000314289 KCNJ4P48050 445 aa14.99□□□□□ -0.01
RNF4-201ENST00000314289 GBP4Q96PP9 640 aa14.99□□□□□ -0.01
RNF4-201ENST00000314289 LAMB4A4D0S4 1761 aa14.99□□□□□ -0.01
RNF4-201ENST00000314289 ERBB4Q15303 1308 aa14.99□□□□□ -0.01
RNF4-201ENST00000314289 DDX46Q7L014 1031 aaKnown RBP14.99□□□□□ -0.01
RNF4-201ENST00000314289 TBC1D2BQ9UPU7 963 aa14.99□□□□□ -0.01
RNF4-201ENST00000314289 ZBTB1Q9Y2K1 713 aa14.99□□□□□ -0.01
RNF4-201ENST00000314289 PLEKHG2Q9H7P9 1386 aa14.99□□□□□ -0.01
RNF4-201ENST00000314289 UBR2Q8IWV8 1755 aa14.98□□□□□ -0.01
RNF4-201ENST00000314289 CASTP20810 708 aaKnown RBP14.98□□□□□ -0.01
RNF4-201ENST00000314289 MCTP1Q6DN14 999 aa14.98□□□□□ -0.01
RNF4-201ENST00000314289 ZNF589Q86UQ0 364 aaPredicted RBP14.98□□□□□ -0.01
RNF4-201ENST00000314289 TNS2Q63HR2 1409 aa14.98□□□□□ -0.01
RNF4-201ENST00000314289 FAM177BA6PVY3 158 aa14.98□□□□□ -0.01
RNF4-201ENST00000314289 STARD3NLO95772 234 aa14.98□□□□□ -0.01
RNF4-201ENST00000314289 ANAPC15P60006 121 aa14.98□□□□□ -0.01
RNF4-201ENST00000314289 ATG9AQ7Z3C6 839 aa14.98□□□□□ -0.01
RNF4-201ENST00000314289 CCDC191Q8NCU4 936 aa14.98□□□□□ -0.01
RNF4-201ENST00000314289 TCEANC2Q96MN5 208 aa14.98□□□□□ -0.01
RNF4-201ENST00000314289 SEC62Q99442 399 aaKnown RBP14.98□□□□□ -0.01
RNF4-201ENST00000314289 ZDHHC9Q9Y397 364 aa14.98□□□□□ -0.01
RNF4-201ENST00000314289 TAF6LQ9Y6J9 622 aa14.98□□□□□ -0.01
RNF4-201ENST00000314289 DDX11L8A8MPP1 907 aa14.97□□□□□ -0.01
RNF4-201ENST00000314289 BAG4O95429 457 aaKnown RBP14.97□□□□□ -0.01
RNF4-201ENST00000314289 TCIRG1Q13488 830 aa14.97□□□□□ -0.01
RNF4-201ENST00000314289 KIF6Q6ZMV9 814 aa14.97□□□□□ -0.01
RNF4-201ENST00000314289 RUFY2Q8WXA3 655 aa14.97□□□□□ -0.01
RNF4-201ENST00000314289 CCDC129Q6ZRS4 1044 aa14.97□□□□□ -0.01
RNF4-201ENST00000314289 JAKMIP1Q96N16 626 aaKnown RBP14.96□□□□□ -0.01
RNF4-201ENST00000314289 CLCN1P35523 988 aa14.96□□□□□ -0.01
RNF4-201ENST00000314289 MRE11P49959 708 aa14.96□□□□□ -0.01
RNF4-201ENST00000314289 AK2P54819 239 aa14.96□□□□□ -0.01
RNF4-201ENST00000314289 GRPEL1Q9HAV7 217 aa14.96□□□□□ -0.01
RNF4-201ENST00000314289 RBM8AQ9Y5S9 174 aaKnown RBP14.96□□□□□ -0.02
RNF4-201ENST00000314289 CCDC171Q6TFL3 1326 aa14.95□□□□□ -0.02
RNF4-201ENST00000314289 CYP19A1P11511 503 aaPredicted RBP14.95□□□□□ -0.02
RNF4-201ENST00000314289 DDB1Q16531 1140 aa14.95□□□□□ -0.02
RNF4-201ENST00000314289 ISCA1Q9BUE6 129 aa14.95□□□□□ -0.02
RNF4-201ENST00000314289 ITGB4P16144 1822 aa14.94□□□□□ -0.02
RNF4-201ENST00000314289 TPRNQ4KMQ1 711 aa14.94□□□□□ -0.02
RNF4-201ENST00000314289 BCL9O00512 1426 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms