RNA–Protein interactions for RNA: ENST00000308696.10

PSMD1-201, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMD1, Length 3,326 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-201ENST00000308696 NAP1L5Q96NT1 182 aaPredicted RBP14.03□□□□□ -0.16
PSMD1-201ENST00000308696 TMEM63CQ9P1W3 806 aa14.03□□□□□ -0.16
PSMD1-201ENST00000308696 LARGE1O95461 756 aa14.03□□□□□ -0.16
PSMD1-201ENST00000308696 SYTL4Q96C24 671 aaPredicted RBP14.03□□□□□ -0.16
PSMD1-201ENST00000308696 WDR33Q9C0J8 1336 aaKnown RBP14.03□□□□□ -0.16
PSMD1-201ENST00000308696 INTS4Q96HW7 963 aaKnown RBP14.02□□□□□ -0.16
PSMD1-201ENST00000308696 TAOK2Q9UL54 1235 aa14.02□□□□□ -0.16
PSMD1-201ENST00000308696 ISY1Q9ULR0 285 aaKnown RBP14.02□□□□□ -0.16
PSMD1-201ENST00000308696 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.02□□□□□ -0.16
PSMD1-201ENST00000308696 GADD45BO75293 160 aaPredicted RBP14.02□□□□□ -0.17
PSMD1-201ENST00000308696 PLCB2Q00722 1185 aa14.02□□□□□ -0.17
PSMD1-201ENST00000308696 CLEC17AQ6ZS10 378 aa14.02□□□□□ -0.17
PSMD1-201ENST00000308696 FERMT3Q86UX7 667 aa14.02□□□□□ -0.17
PSMD1-201ENST00000308696 DBNDD2Q9BQY9 259 aa14.02□□□□□ -0.17
PSMD1-201ENST00000308696 TIMM10P62072 90 aa14.02□□□□□ -0.17
PSMD1-201ENST00000308696 CCDC129Q6ZRS4 1044 aa14.02□□□□□ -0.17
PSMD1-201ENST00000308696 RBSNQ9H1K0 784 aa14.02□□□□□ -0.17
PSMD1-201ENST00000308696 KDM6AO15550 1401 aaPredicted RBP14.01□□□□□ -0.17
PSMD1-201ENST00000308696 NCAPD2Q15021 1401 aa14.01□□□□□ -0.17
PSMD1-201ENST00000308696 CREB3L3Q68CJ9 461 aa14.01□□□□□ -0.17
PSMD1-201ENST00000308696 USP48Q86UV5 1035 aa14.01□□□□□ -0.17
PSMD1-201ENST00000308696 CNPY2Q9Y2B0 182 aa14.01□□□□□ -0.17
PSMD1-201ENST00000308696 FAM208AQ9UK61 1670 aaKnown RBP14.01□□□□□ -0.17
PSMD1-201ENST00000308696 CCDC171Q6TFL3 1326 aa14.01□□□□□ -0.17
PSMD1-201ENST00000308696 MEGF6O75095 1541 aa14.01□□□□□ -0.17
PSMD1-201ENST00000308696 GJB2P29033 226 aa14.01□□□□□ -0.17
PSMD1-201ENST00000308696 MPNDQ8N594 471 aa14.01□□□□□ -0.17
PSMD1-201ENST00000308696 ZNF594Q96JF6 807 aaPredicted RBP14.01□□□□□ -0.17
PSMD1-201ENST00000308696 SYT1P21579 422 aa14□□□□□ -0.17
PSMD1-201ENST00000308696 BRINP3Q76B58 766 aa14□□□□□ -0.17
PSMD1-201ENST00000308696 SEC62Q99442 399 aaKnown RBP14□□□□□ -0.17
PSMD1-201ENST00000308696 SPATA31A3Q5VYP0 1347 aa14□□□□□ -0.17
PSMD1-201ENST00000308696 ESPNB1AK53 854 aa14□□□□□ -0.17
PSMD1-201ENST00000308696 STX6O43752 255 aa14□□□□□ -0.17
PSMD1-201ENST00000308696 SLFNL1Q499Z3 407 aa14□□□□□ -0.17
PSMD1-201ENST00000308696 DBNLQ9UJU6 430 aaKnown RBP14□□□□□ -0.17
PSMD1-201ENST00000308696 PPFIA3O75145 1194 aa14□□□□□ -0.17
PSMD1-201ENST00000308696 HSP90B1P14625 803 aaKnown RBP14□□□□□ -0.17
PSMD1-201ENST00000308696 FOSBP53539 338 aa14□□□□□ -0.17
PSMD1-201ENST00000308696 COL9A3Q14050 684 aaPredicted RBP14□□□□□ -0.17
PSMD1-201ENST00000308696 GORABQ5T7V8 394 aa14□□□□□ -0.17
PSMD1-201ENST00000308696 RNF20Q5VTR2 975 aa14□□□□□ -0.17
PSMD1-201ENST00000308696 BLOC1S2Q6QNY1 142 aa14□□□□□ -0.17
PSMD1-201ENST00000308696 ZNF589Q86UQ0 364 aaPredicted RBP14□□□□□ -0.17
PSMD1-201ENST00000308696 MARF1Q9Y4F3 1742 aaKnown RBP14□□□□□ -0.17
PSMD1-201ENST00000308696 KAT6BQ8WYB5 2073 aa13.99□□□□□ -0.17
PSMD1-201ENST00000308696 HIP1O00291 1037 aa13.99□□□□□ -0.17
PSMD1-201ENST00000308696 PTPN12Q05209 780 aaKnown RBP13.99□□□□□ -0.17
PSMD1-201ENST00000308696 TNNI3KQ59H18 835 aa13.99□□□□□ -0.17
PSMD1-201ENST00000308696 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.99□□□□□ -0.172e-7■■■□□ 17.3
PSMD1-201ENST00000308696 FPGT-TNNI3KV9GXZ4 949 aa13.99□□□□□ -0.17
PSMD1-201ENST00000308696 LRRC37A3O60309 1634 aa13.99□□□□□ -0.17
PSMD1-201ENST00000308696 MBD3O95983 291 aa13.99□□□□□ -0.17
PSMD1-201ENST00000308696 LRRC2Q9BYS8 371 aa13.99□□□□□ -0.17
PSMD1-201ENST00000308696 TAF6LQ9Y6J9 622 aa13.99□□□□□ -0.17
PSMD1-201ENST00000308696 HEG1Q9ULI3 1381 aa13.99□□□□□ -0.17
PSMD1-201ENST00000308696 NBPF26B4DH59 902 aa13.98□□□□□ -0.17
PSMD1-201ENST00000308696 TAF7LQ5H9L4 462 aa13.98□□□□□ -0.17
PSMD1-201ENST00000308696 NBPF14Q5TI25 921 aa13.98□□□□□ -0.17
PSMD1-201ENST00000308696 NBPF10Q6P3W6 841 aaKnown RBP13.98□□□□□ -0.17
PSMD1-201ENST00000308696 NBPF15Q8N660 670 aa13.98□□□□□ -0.17
PSMD1-201ENST00000308696 PLBD2Q8NHP8 589 aa13.98□□□□□ -0.17
PSMD1-201ENST00000308696 SLAIN2Q9P270 581 aa13.98□□□□□ -0.17
PSMD1-201ENST00000308696 GOLIM4O00461 696 aa13.98□□□□□ -0.17
PSMD1-201ENST00000308696 SLC27A2O14975 620 aa13.98□□□□□ -0.17
PSMD1-201ENST00000308696 ME3Q16798 604 aa13.98□□□□□ -0.17
PSMD1-201ENST00000308696 TTC14Q96N46 770 aa13.98□□□□□ -0.17
PSMD1-201ENST00000308696 MST1RQ04912 1400 aa13.97□□□□□ -0.17
PSMD1-201ENST00000308696 ZSCAN22P10073 491 aaPredicted RBP13.97□□□□□ -0.17
PSMD1-201ENST00000308696 PSMA5P28066 241 aa13.97□□□□□ -0.17
PSMD1-201ENST00000308696 FKBP4Q02790 459 aaKnown RBP eCLIP13.97□□□□□ -0.17
PSMD1-201ENST00000308696 LARP1BQ659C4 914 aaKnown RBP13.97□□□□□ -0.17
PSMD1-201ENST00000308696 FAM173BQ6P4H8 233 aa13.97□□□□□ -0.17
PSMD1-201ENST00000308696 CWC25Q9NXE8 425 aaPredicted RBP13.97□□□□□ -0.17
PSMD1-201ENST00000308696 PTMAP06454 111 aaKnown RBP13.97□□□□□ -0.17
PSMD1-201ENST00000308696 IL2RBP14784 551 aa13.97□□□□□ -0.17
PSMD1-201ENST00000308696 SYAP1Q96A49 352 aaPredicted RBP13.97□□□□□ -0.17
PSMD1-201ENST00000308696 SNRKQ9NRH2 765 aa13.97□□□□□ -0.17
PSMD1-201ENST00000308696 NECTIN1Q15223 517 aa13.97□□□□□ -0.17
PSMD1-201ENST00000308696 TPCN1Q9ULQ1 816 aa13.97□□□□□ -0.17
PSMD1-201ENST00000308696 GPTP24298 496 aa13.96□□□□□ -0.17
PSMD1-201ENST00000308696 ZNF445P59923 1031 aa13.96□□□□□ -0.17
PSMD1-201ENST00000308696 DNM1Q05193 864 aaKnown RBP13.96□□□□□ -0.17
PSMD1-201ENST00000308696 USP42Q9H9J4 1324 aaKnown RBP13.96□□□□□ -0.17
PSMD1-201ENST00000308696 CCDC173Q0VFZ6 552 aa13.96□□□□□ -0.18
PSMD1-201ENST00000308696 VPS53Q5VIR6 699 aa13.96□□□□□ -0.18
PSMD1-201ENST00000308696 COPRSQ9NQ92 184 aa13.96□□□□□ -0.18
PSMD1-201ENST00000308696 TMOD3Q9NYL9 352 aa13.96□□□□□ -0.18
PSMD1-201ENST00000308696 MSNP26038 577 aaKnown RBP13.95□□□□□ -0.18
PSMD1-201ENST00000308696 LRRC24Q50LG9 513 aa13.95□□□□□ -0.18
PSMD1-201ENST00000308696 MAP4K1Q92918 833 aa13.95□□□□□ -0.18
PSMD1-201ENST00000308696 ERBB4Q15303 1308 aa13.95□□□□□ -0.18
PSMD1-201ENST00000308696 ZNF335Q9H4Z2 1342 aaPredicted RBP13.95□□□□□ -0.18
PSMD1-201ENST00000308696 DDX11Q96FC9 970 aa13.95□□□□□ -0.18
PSMD1-201ENST00000308696 ZSWIM6Q9HCJ5 1215 aa13.95□□□□□ -0.18
PSMD1-201ENST00000308696 UTYO14607 1347 aa13.95□□□□□ -0.18
PSMD1-201ENST00000308696 PCDH11XQ9BZA7 1347 aa13.95□□□□□ -0.18
PSMD1-201ENST00000308696 PCDH11YQ9BZA8 1340 aa13.95□□□□□ -0.18
PSMD1-201ENST00000308696 FAM177BA6PVY3 158 aa13.95□□□□□ -0.18
PSMD1-201ENST00000308696 LRSAM1Q6UWE0 723 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms