RNA–Protein interactions for RNA: ENST00000306049.9

TEFM-201, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 2

Gene TEFM, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-201ENST00000306049 CC2D1BQ5T0F9 858 aaKnown RBP12.74□□□□□ -0.37
TEFM-201ENST00000306049 GPC2Q8N158 579 aa12.74□□□□□ -0.37
TEFM-201ENST00000306049 TLL2Q9Y6L7 1015 aa12.74□□□□□ -0.37
TEFM-201ENST00000306049 CEMIPQ8WUJ3 1361 aa12.73□□□□□ -0.37
TEFM-201ENST00000306049 NPR1P16066 1061 aa12.73□□□□□ -0.37
TEFM-201ENST00000306049 PIP4K2AP48426 406 aaPredicted RBP12.73□□□□□ -0.37
TEFM-201ENST00000306049 SOX10P56693 466 aa12.73□□□□□ -0.37
TEFM-201ENST00000306049 CST9Q5W186 159 aa12.73□□□□□ -0.37
TEFM-201ENST00000306049 POTEHQ6S545 545 aa12.73□□□□□ -0.37
TEFM-201ENST00000306049 NBPF5PQ86XG9 351 aaPredicted RBP12.73□□□□□ -0.37
TEFM-201ENST00000306049 LAMB4A4D0S4 1761 aa12.72□□□□□ -0.37
TEFM-201ENST00000306049 KIF7Q2M1P5 1343 aa12.72□□□□□ -0.37
TEFM-201ENST00000306049 BTBD11A6QL63 1104 aa12.72□□□□□ -0.37
TEFM-201ENST00000306049 FZD9O00144 591 aa12.72□□□□□ -0.37
TEFM-201ENST00000306049 PER1O15534 1290 aaPredicted RBP12.72□□□□□ -0.37
TEFM-201ENST00000306049 LMOD1P29536 600 aaPredicted RBP12.72□□□□□ -0.37
TEFM-201ENST00000306049 CLEC4GQ6UXB4 293 aa12.72□□□□□ -0.37
TEFM-201ENST00000306049 USP16Q9Y5T5 823 aa12.72□□□□□ -0.37
TEFM-201ENST00000306049 BRPF1P55201 1214 aaPredicted RBP12.71□□□□□ -0.37
TEFM-201ENST00000306049 OLFM4Q6UX06 510 aa12.71□□□□□ -0.37
TEFM-201ENST00000306049 RTKN2Q8IZC4 609 aa12.71□□□□□ -0.37
TEFM-201ENST00000306049 ZNF652Q9Y2D9 606 aa12.71□□□□□ -0.37
TEFM-201ENST00000306049 GJA3Q9Y6H8 435 aa12.71□□□□□ -0.37
TEFM-201ENST00000306049 PRAMEF22A3QJZ6 481 aa12.7□□□□□ -0.38
TEFM-201ENST00000306049 KLRG2A4D1S0 409 aaPredicted RBP12.7□□□□□ -0.38
TEFM-201ENST00000306049 TRAF5O00463 557 aa12.7□□□□□ -0.38
TEFM-201ENST00000306049 IARSP41252 1262 aaKnown RBP12.7□□□□□ -0.38
TEFM-201ENST00000306049 JDP2Q8WYK2 163 aa12.7□□□□□ -0.38
TEFM-201ENST00000306049 DLG5Q8TDM6 1919 aa12.7□□□□□ -0.38
TEFM-201ENST00000306049 EIF6P56537 245 aaKnown RBP12.69□□□□□ -0.38
TEFM-201ENST00000306049 TPTE2Q6XPS3 522 aa12.69□□□□□ -0.38
TEFM-201ENST00000306049 SAPCD2Q86UD0 394 aa12.69□□□□□ -0.38
TEFM-201ENST00000306049 SYNE4Q8N205 404 aa12.69□□□□□ -0.38
TEFM-201ENST00000306049 PHACTR3Q96KR7 559 aa12.69□□□□□ -0.38
TEFM-201ENST00000306049 NIP7Q9Y221 180 aaKnown RBP eCLIP12.69□□□□□ -0.38
TEFM-201ENST00000306049 FAM177BA6PVY3 158 aa12.68□□□□□ -0.38
TEFM-201ENST00000306049 SNRPA1P09661 255 aaKnown RBP12.68□□□□□ -0.38
TEFM-201ENST00000306049 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
TEFM-201ENST00000306049 CNGB1Q14028 1251 aaPredicted RBP12.68□□□□□ -0.38
TEFM-201ENST00000306049 CIAPIN1Q6FI81 312 aa12.68□□□□□ -0.38
TEFM-201ENST00000306049 USP50Q70EL3 339 aaPredicted RBP12.68□□□□□ -0.38
TEFM-201ENST00000306049 NPC1L1Q9UHC9 1359 aa12.68□□□□□ -0.38
TEFM-201ENST00000306049 COL4A5P29400 1685 aa12.67□□□□□ -0.38
TEFM-201ENST00000306049 NBPF26B4DH59 902 aa12.67□□□□□ -0.38
TEFM-201ENST00000306049 RGL2O15211 777 aa12.67□□□□□ -0.38
TEFM-201ENST00000306049 CELF2O95319 508 aaKnown RBP12.67□□□□□ -0.38
TEFM-201ENST00000306049 ALDH1B1P30837 517 aa12.67□□□□□ -0.38
TEFM-201ENST00000306049 EPS15P42566 896 aa12.67□□□□□ -0.38
TEFM-201ENST00000306049 NBPF10Q6P3W6 841 aaKnown RBP12.67□□□□□ -0.38
TEFM-201ENST00000306049 NBPF15Q8N660 670 aa12.67□□□□□ -0.38
TEFM-201ENST00000306049 HHIPL1Q96JK4 782 aa12.67□□□□□ -0.38
TEFM-201ENST00000306049 RSPH6AQ9H0K4 717 aa12.67□□□□□ -0.38
TEFM-201ENST00000306049 SNED1Q8TER0 1413 aa12.67□□□□□ -0.38
TEFM-201ENST00000306049 GCC1Q96CN9 775 aa12.66□□□□□ -0.38
TEFM-201ENST00000306049 KDM3BQ7LBC6 1761 aa12.66□□□□□ -0.38
TEFM-201ENST00000306049 GTF2E1P29083 439 aaPredicted RBP12.65□□□□□ -0.38
TEFM-201ENST00000306049 SCNN1DP51172 638 aa12.65□□□□□ -0.38
TEFM-201ENST00000306049 HLFQ16534 295 aa12.65□□□□□ -0.38
TEFM-201ENST00000306049 MCM10Q7L590 875 aa12.65□□□□□ -0.38
TEFM-201ENST00000306049 RTF1Q92541 710 aaKnown RBP12.65□□□□□ -0.38
TEFM-201ENST00000306049 PSMD1Q99460 953 aa12.65□□□□□ -0.38
TEFM-201ENST00000306049 NOGQ13253 232 aa12.64□□□□□ -0.39
TEFM-201ENST00000306049 ZNF408Q9H9D4 720 aa12.64□□□□□ -0.39
TEFM-201ENST00000306049 ABCC12Q96J65 1359 aa12.64□□□□□ -0.39
TEFM-201ENST00000306049 CRY2Q49AN0 593 aa12.63□□□□□ -0.39
TEFM-201ENST00000306049 POLR2AP24928 1970 aaKnown RBP12.63□□□□□ -0.39
TEFM-201ENST00000306049 LAMB2P55268 1798 aa12.62□□□□□ -0.39
TEFM-201ENST00000306049 DCTN1Q14203 1278 aa12.62□□□□□ -0.39
TEFM-201ENST00000306049 CC2D2BQ6DHV5 1058 aa12.62□□□□□ -0.39
TEFM-201ENST00000306049 NUTM1Q86Y26 1132 aa12.62□□□□□ -0.39
TEFM-201ENST00000306049 LARGE2Q8N3Y3 721 aa12.62□□□□□ -0.39
TEFM-201ENST00000306049 CFAP53Q96M91 514 aa12.62□□□□□ -0.39
TEFM-201ENST00000306049 NYXQ9GZU5 481 aa12.62□□□□□ -0.39
TEFM-201ENST00000306049 ADARB2Q9NS39 739 aaKnown RBP12.62□□□□□ -0.39
TEFM-201ENST00000306049 CCER1Q8TC90 406 aaPredicted RBP12.61□□□□□ -0.39
TEFM-201ENST00000306049 ZIC5Q96T25 663 aa12.61□□□□□ -0.39
TEFM-201ENST00000306049 NUDCQ9Y266 331 aa12.61□□□□□ -0.39
TEFM-201ENST00000306049 RIC1Q4ADV7 1423 aa12.61□□□□□ -0.39
TEFM-201ENST00000306049 U2AF1L5P0DN76 240 aaPredicted RBP12.6□□□□□ -0.39
TEFM-201ENST00000306049 U2AF1Q01081 240 aaKnown RBP eCLIP12.6□□□□□ -0.39
TEFM-201ENST00000306049 TAF7Q15545 349 aaPredicted RBP12.6□□□□□ -0.39
TEFM-201ENST00000306049 SLC51AQ86UW1 340 aa12.6□□□□□ -0.39
TEFM-201ENST00000306049 NGEFQ8N5V2 710 aa12.6□□□□□ -0.39
TEFM-201ENST00000306049 RPGRQ92834 1020 aaKnown RBP12.6□□□□□ -0.39
TEFM-201ENST00000306049 GLIS2Q9BZE0 524 aaPredicted RBP12.6□□□□□ -0.39
TEFM-201ENST00000306049 SAGE1Q9NXZ1 904 aa12.6□□□□□ -0.39
TEFM-201ENST00000306049 AKAP11Q9UKA4 1901 aa12.6□□□□□ -0.39
TEFM-201ENST00000306049 MAP3K15Q6ZN16 1313 aa12.6□□□□□ -0.39
TEFM-201ENST00000306049 TAF1P21675 1872 aa12.59□□□□□ -0.39
TEFM-201ENST00000306049 IBTKQ9P2D0 1353 aaPredicted RBP12.59□□□□□ -0.39
TEFM-201ENST00000306049 ANKRD36CQ5JPF3 1778 aa12.59□□□□□ -0.39
TEFM-201ENST00000306049 ERVV-1B6SEH8 477 aa12.59□□□□□ -0.39
TEFM-201ENST00000306049 HTATSF1O43719 755 aaKnown RBP12.59□□□□□ -0.39
TEFM-201ENST00000306049 HOXA10P31260 410 aaPredicted RBP12.59□□□□□ -0.39
TEFM-201ENST00000306049 HUNKP57058 714 aa12.59□□□□□ -0.39
TEFM-201ENST00000306049 GRIPAP1Q4V328 841 aa12.59□□□□□ -0.39
TEFM-201ENST00000306049 NIM1KQ8IY84 436 aa12.59□□□□□ -0.39
TEFM-201ENST00000306049 MIS18AQ9NYP9 233 aa12.59□□□□□ -0.39
TEFM-201ENST00000306049 GPRC5DQ9NZD1 345 aa12.59□□□□□ -0.39
TEFM-201ENST00000306049 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms