RNA–Protein interactions for RNA: ENST00000305978.6

SCAND1-201, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-201ENST00000305978 TAF1P21675 1872 aa20.24■□□□□ 0.83
SCAND1-201ENST00000305978 PPP1R42Q7Z4L9 355 aa20.24■□□□□ 0.83
SCAND1-201ENST00000305978 CACNA1FO60840 1977 aa20.24■□□□□ 0.83
SCAND1-201ENST00000305978 ALDH1B1P30837 517 aa20.23■□□□□ 0.83
SCAND1-201ENST00000305978 CCDC93Q567U6 631 aa20.23■□□□□ 0.83
SCAND1-201ENST00000305978 HSP90AB3PQ58FF7 597 aa20.23■□□□□ 0.83
SCAND1-201ENST00000305978 MRS2Q9HD23 443 aa20.23■□□□□ 0.83
SCAND1-201ENST00000305978 DBF4Q9UBU7 674 aaPredicted RBP20.23■□□□□ 0.83
SCAND1-201ENST00000305978 TOMM70O94826 608 aa20.22■□□□□ 0.83
SCAND1-201ENST00000305978 RNF123Q5XPI4 1314 aa20.22■□□□□ 0.83
SCAND1-201ENST00000305978 SNED1Q8TER0 1413 aa20.2■□□□□ 0.82
SCAND1-201ENST00000305978 GLTPD2A6NH11 291 aa20.2■□□□□ 0.82
SCAND1-201ENST00000305978 HOXA10P31260 410 aaPredicted RBP20.2■□□□□ 0.82
SCAND1-201ENST00000305978 TCIRG1Q13488 830 aa20.2■□□□□ 0.82
SCAND1-201ENST00000305978 CCDC27Q2M243 656 aa20.2■□□□□ 0.82
SCAND1-201ENST00000305978 OLFM4Q6UX06 510 aa20.2■□□□□ 0.82
SCAND1-201ENST00000305978 NLRP10Q86W26 655 aa20.2■□□□□ 0.82
SCAND1-201ENST00000305978 RPGRQ92834 1020 aaKnown RBP20.2■□□□□ 0.82
SCAND1-201ENST00000305978 UTP14AQ9BVJ6 771 aaKnown RBP20.2■□□□□ 0.82
SCAND1-201ENST00000305978 RRAGCQ9HB90 399 aa20.2■□□□□ 0.82
SCAND1-201ENST00000305978 HYPKQ9NX55 129 aa20.2■□□□□ 0.82
SCAND1-201ENST00000305978 SCN4AP35499 1836 aa20.19■□□□□ 0.82
SCAND1-201ENST00000305978 HSPA6P17066 643 aa20.19■□□□□ 0.82
SCAND1-201ENST00000305978 C3orf67Q6ZVT6 689 aa20.19■□□□□ 0.82
SCAND1-201ENST00000305978 PLBD2Q8NHP8 589 aa20.19■□□□□ 0.82
SCAND1-201ENST00000305978 FKBP4Q02790 459 aaKnown RBP eCLIP20.18■□□□□ 0.82
SCAND1-201ENST00000305978 SLC10A5Q5PT55 438 aa20.18■□□□□ 0.82
SCAND1-201ENST00000305978 C8orf58Q8NAV2 365 aa20.18■□□□□ 0.82
SCAND1-201ENST00000305978 ELL2O00472 640 aaPredicted RBP20.17■□□□□ 0.82
SCAND1-201ENST00000305978 ANKRD13DQ6ZTN6 518 aa20.17■□□□□ 0.82
SCAND1-201ENST00000305978 C16orf71Q8IYS4 520 aaPredicted RBP20.17■□□□□ 0.82
SCAND1-201ENST00000305978 RTKN2Q8IZC4 609 aa20.17■□□□□ 0.82
SCAND1-201ENST00000305978 RBM46Q8TBY0 533 aaKnown RBP20.17■□□□□ 0.82
SCAND1-201ENST00000305978 CRAMP1Q96RY5 1269 aa20.17■□□□□ 0.82
SCAND1-201ENST00000305978 NCBP3Q53F19 620 aaKnown RBP20.16■□□□□ 0.82
SCAND1-201ENST00000305978 WWC1Q8IX03 1113 aa20.16■□□□□ 0.82
SCAND1-201ENST00000305978 RBM17Q96I25 401 aaKnown RBP20.16■□□□□ 0.82
SCAND1-201ENST00000305978 NLRP3Q96P20 1036 aa20.16■□□□□ 0.82
SCAND1-201ENST00000305978 LRRC37AA6NMS7 1700 aa20.16■□□□□ 0.82
SCAND1-201ENST00000305978 DPY19L2Q6NUT2 758 aa20.15■□□□□ 0.82
SCAND1-201ENST00000305978 MYH3P11055 1940 aa20.14■□□□□ 0.81
SCAND1-201ENST00000305978 SH3TC1Q8TE82 1336 aa20.14■□□□□ 0.81
SCAND1-201ENST00000305978 VEGFAP15692 232 aaPredicted RBP20.14■□□□□ 0.81
SCAND1-201ENST00000305978 CC2D2BQ6DHV5 1058 aa20.14■□□□□ 0.81
SCAND1-201ENST00000305978 SYNE4Q8N205 404 aa20.14■□□□□ 0.81
SCAND1-201ENST00000305978 TSR2Q969E8 191 aaKnown RBP20.14■□□□□ 0.81
SCAND1-201ENST00000305978 ISCA1Q9BUE6 129 aa20.14■□□□□ 0.81
SCAND1-201ENST00000305978 ZNF277Q9NRM2 450 aaPredicted RBP20.14■□□□□ 0.81
SCAND1-201ENST00000305978 TRMT112Q9UI30 125 aaKnown RBP20.14■□□□□ 0.81
SCAND1-201ENST00000305978 IL16Q14005 1332 aa20.13■□□□□ 0.81
SCAND1-201ENST00000305978 PSMD1Q99460 953 aa20.13■□□□□ 0.81
SCAND1-201ENST00000305978 PHAXQ9H814 394 aaKnown RBP20.13■□□□□ 0.81
SCAND1-201ENST00000305978 PPEF1O14829 653 aaPredicted RBP20.12■□□□□ 0.81
SCAND1-201ENST00000305978 HCLS1P14317 486 aaPredicted RBP20.12■□□□□ 0.81
SCAND1-201ENST00000305978 GOLGA2Q08379 1002 aa20.12■□□□□ 0.81
SCAND1-201ENST00000305978 TSPYL6Q8N831 410 aa20.12■□□□□ 0.81
SCAND1-201ENST00000305978 CHMP4AQ9BY43 222 aa20.12■□□□□ 0.81
SCAND1-201ENST00000305978 COL4A5P29400 1685 aa20.12■□□□□ 0.81
SCAND1-201ENST00000305978 ABCC4O15439 1325 aa20.11■□□□□ 0.81
SCAND1-201ENST00000305978 POTECB2RU33 542 aa20.11■□□□□ 0.81
SCAND1-201ENST00000305978 ATP5J2-PTCD1G3V325 749 aa20.11■□□□□ 0.81
SCAND1-201ENST00000305978 FSTL1Q12841 308 aa20.11■□□□□ 0.81
SCAND1-201ENST00000305978 CCDC30Q5VVM6 783 aa20.11■□□□□ 0.81
SCAND1-201ENST00000305978 SLC51AQ86UW1 340 aa20.11■□□□□ 0.81
SCAND1-201ENST00000305978 IARSP41252 1262 aaKnown RBP20.1■□□□□ 0.81
SCAND1-201ENST00000305978 TRIM28Q13263 835 aaKnown RBP20.1■□□□□ 0.81
SCAND1-201ENST00000305978 GRIPAP1Q4V328 841 aa20.1■□□□□ 0.81
SCAND1-201ENST00000305978 RIC3Q7Z5B4 369 aa20.1■□□□□ 0.81
SCAND1-201ENST00000305978 ZNF428Q96B54 188 aa20.1■□□□□ 0.81
SCAND1-201ENST00000305978 DDNO94850 711 aaPredicted RBP20.09■□□□□ 0.81
SCAND1-201ENST00000305978 COL4A1P02462 1669 aa20.08■□□□□ 0.81
SCAND1-201ENST00000305978 TCERG1O14776 1098 aaKnown RBP20.08■□□□□ 0.81
SCAND1-201ENST00000305978 APLP1P51693 650 aa20.08■□□□□ 0.81
SCAND1-201ENST00000305978 SMC1BQ8NDV3 1235 aa20.08■□□□□ 0.81
SCAND1-201ENST00000305978 ATP6V0A2Q9Y487 856 aa20.08■□□□□ 0.81
SCAND1-201ENST00000305978 ZNF541Q9H0D2 1346 aa20.07■□□□□ 0.8
SCAND1-201ENST00000305978 FAM89AQ96GI7 184 aa20.07■□□□□ 0.8
SCAND1-201ENST00000305978 SPEF2Q9C093 1822 aa20.06■□□□□ 0.8
SCAND1-201ENST00000305978 LTBP1Q14766 1721 aa20.06■□□□□ 0.8
SCAND1-201ENST00000305978 TWISTNBQ3B726 338 aaPredicted RBP20.06■□□□□ 0.8
SCAND1-201ENST00000305978 DDX46Q7L014 1031 aaKnown RBP20.06■□□□□ 0.8
SCAND1-201ENST00000305978 WDR63Q8IWG1 891 aa20.06■□□□□ 0.8
SCAND1-201ENST00000305978 SALL2Q9Y467 1007 aaPredicted RBP20.06■□□□□ 0.8
SCAND1-201ENST00000305978 ADAMTSL1Q8N6G6 1762 aa20.06■□□□□ 0.8
SCAND1-201ENST00000305978 FANCIQ9NVI1 1328 aa20.05■□□□□ 0.8
SCAND1-201ENST00000305978 DUOX1Q9NRD9 1551 aa20.05■□□□□ 0.8
SCAND1-201ENST00000305978 FZD9O00144 591 aa20.05■□□□□ 0.8
SCAND1-201ENST00000305978 BBOX1O75936 387 aa20.05■□□□□ 0.8
SCAND1-201ENST00000305978 DDX58O95786 925 aaKnown RBP20.05■□□□□ 0.8
SCAND1-201ENST00000305978 GRAPQ13588 217 aa20.05■□□□□ 0.8
SCAND1-201ENST00000305978 FAM9BQ8IZU0 186 aa20.05■□□□□ 0.8
SCAND1-201ENST00000305978 GRAPLQ8TC17 118 aaPredicted RBP20.05■□□□□ 0.8
SCAND1-201ENST00000305978 L3MBTL3Q96JM7 780 aaPredicted RBP20.05■□□□□ 0.8
SCAND1-201ENST00000305978 MYD88Q99836 296 aa20.05■□□□□ 0.8
SCAND1-201ENST00000305978 TMX4Q9H1E5 349 aaPredicted RBP20.05■□□□□ 0.8
SCAND1-201ENST00000305978 SF3B3Q15393 1217 aaKnown RBP20.04■□□□□ 0.8
SCAND1-201ENST00000305978 SP8Q8IXZ3 490 aa20.04■□□□□ 0.8
SCAND1-201ENST00000305978 JDP2Q8WYK2 163 aa20.04■□□□□ 0.8
SCAND1-201ENST00000305978 STK31Q9BXU1 1019 aa20.04■□□□□ 0.8
SCAND1-201ENST00000305978 PCNTO95613 3336 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms