RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 HEG1Q9ULI3 1381 aa16.29■□□□□ 0.2
CDH8-201ENST00000299345 BLOC1S2Q6QNY1 142 aa16.29■□□□□ 0.2
CDH8-201ENST00000299345 LRSAM1Q6UWE0 723 aa16.29■□□□□ 0.2
CDH8-201ENST00000299345 RUFY3Q7L099 469 aa16.29■□□□□ 0.2
CDH8-201ENST00000299345 TLR7Q9NYK1 1049 aaKnown RBP16.29■□□□□ 0.2
CDH8-201ENST00000299345 CYP27B1O15528 508 aa16.29■□□□□ 0.2
CDH8-201ENST00000299345 ZSCAN22P10073 491 aaPredicted RBP16.29■□□□□ 0.2
CDH8-201ENST00000299345 CSPP1Q1MSJ5 1256 aa16.29■□□□□ 0.2
CDH8-201ENST00000299345 VPS53Q5VIR6 699 aa16.29■□□□□ 0.2
CDH8-201ENST00000299345 NEUROD6Q96NK8 337 aa16.29■□□□□ 0.2
CDH8-201ENST00000299345 RBSNQ9H1K0 784 aa16.29■□□□□ 0.2
CDH8-201ENST00000299345 USP54Q70EL1 1684 aa16.28■□□□□ 0.2
CDH8-201ENST00000299345 FIBPO43427 364 aa16.28■□□□□ 0.2
CDH8-201ENST00000299345 PTMAP06454 111 aaKnown RBP16.28■□□□□ 0.2
CDH8-201ENST00000299345 CREB3L3Q68CJ9 461 aa16.28■□□□□ 0.2
CDH8-201ENST00000299345 MED1Q15648 1581 aaPredicted RBP16.28■□□□□ 0.2
CDH8-201ENST00000299345 USP48Q86UV5 1035 aa16.28■□□□□ 0.2
CDH8-201ENST00000299345 SLIT3O75094 1523 aa16.28■□□□□ 0.2
CDH8-201ENST00000299345 SYT1P21579 422 aa16.28■□□□□ 0.2
CDH8-201ENST00000299345 GJB2P29033 226 aa16.27■□□□□ 0.2
CDH8-201ENST00000299345 ADCK5Q3MIX3 580 aa16.27■□□□□ 0.2
CDH8-201ENST00000299345 TTC14Q96N46 770 aa16.27■□□□□ 0.2
CDH8-201ENST00000299345 TSPY26PQ9H489 355 aa16.27■□□□□ 0.2
CDH8-201ENST00000299345 UTYO14607 1347 aa16.27■□□□□ 0.2
CDH8-201ENST00000299345 EPHA10Q5JZY3 1008 aa16.27■□□□□ 0.19
CDH8-201ENST00000299345 NSFL1CQ9UNZ2 370 aaKnown RBP16.27■□□□□ 0.19
CDH8-201ENST00000299345 EVA1CP58658 441 aa16.27■□□□□ 0.19
CDH8-201ENST00000299345 TM6SF1Q9BZW5 370 aa16.27■□□□□ 0.19
CDH8-201ENST00000299345 TFCP2Q12800 502 aa16.26■□□□□ 0.19
CDH8-201ENST00000299345 IL17RAQ96F46 866 aa16.26■□□□□ 0.19
CDH8-201ENST00000299345 LMBR1LQ6UX01 489 aa16.26■□□□□ 0.19
CDH8-201ENST00000299345 NECAB1Q8N987 351 aa16.26■□□□□ 0.19
CDH8-201ENST00000299345 ANKRD1Q15327 319 aa16.26■□□□□ 0.19
CDH8-201ENST00000299345 ZCRB1Q8TBF4 217 aaKnown RBP16.26■□□□□ 0.19
CDH8-201ENST00000299345 CNPY2Q9Y2B0 182 aa16.26■□□□□ 0.19
CDH8-201ENST00000299345 ZSWIM6Q9HCJ5 1215 aa16.25■□□□□ 0.19
CDH8-201ENST00000299345 COPRSQ9NQ92 184 aa16.25■□□□□ 0.19
CDH8-201ENST00000299345 STRN4Q9NRL3 753 aa16.25■□□□□ 0.19
CDH8-201ENST00000299345 A0A0D9SFI3 127 aa16.25■□□□□ 0.19
CDH8-201ENST00000299345 DTNBO60941 627 aa16.25■□□□□ 0.19
CDH8-201ENST00000299345 HSPA2P54652 639 aa16.25■□□□□ 0.19
CDH8-201ENST00000299345 PLBD2Q8NHP8 589 aa16.25■□□□□ 0.19
CDH8-201ENST00000299345 TCEANC2Q96MN5 208 aa16.25■□□□□ 0.19
CDH8-201ENST00000299345 RGPD2P0DJD1 1756 aa16.25■□□□□ 0.19
CDH8-201ENST00000299345 LARP1BQ659C4 914 aaKnown RBP16.24■□□□□ 0.19
CDH8-201ENST00000299345 EDC3Q96F86 508 aaKnown RBP16.24■□□□□ 0.19
CDH8-201ENST00000299345 HSP90B1P14625 803 aaKnown RBP16.24■□□□□ 0.19
CDH8-201ENST00000299345 TNNI3KQ59H18 835 aa16.24■□□□□ 0.19
CDH8-201ENST00000299345 MAP4K1Q92918 833 aa16.24■□□□□ 0.19
CDH8-201ENST00000299345 PPP1R9BQ96SB3 815 aa16.24■□□□□ 0.19
CDH8-201ENST00000299345 FPGT-TNNI3KV9GXZ4 949 aa16.24■□□□□ 0.19
CDH8-201ENST00000299345 KDM6AO15550 1401 aaPredicted RBP16.24■□□□□ 0.19
CDH8-201ENST00000299345 SLC27A2O14975 620 aa16.24■□□□□ 0.19
CDH8-201ENST00000299345 GADD45BO75293 160 aaPredicted RBP16.24■□□□□ 0.19
CDH8-201ENST00000299345 F13A1P00488 732 aa16.24■□□□□ 0.19
CDH8-201ENST00000299345 NECTIN1Q15223 517 aa16.24■□□□□ 0.19
CDH8-201ENST00000299345 ZSCAN30Q86W11 494 aa16.24■□□□□ 0.19
CDH8-201ENST00000299345 GOLGA6L4A6NEF3 574 aa16.23■□□□□ 0.19
CDH8-201ENST00000299345 ZBTB3Q9H5J0 574 aa16.23■□□□□ 0.19
CDH8-201ENST00000299345 LMO7Q8WWI1 1683 aa16.23■□□□□ 0.19
CDH8-201ENST00000299345 PDCP20941 246 aa16.23■□□□□ 0.19
CDH8-201ENST00000299345 GORABQ5T7V8 394 aa16.23■□□□□ 0.19
CDH8-201ENST00000299345 CWC25Q9NXE8 425 aaPredicted RBP16.23■□□□□ 0.19
CDH8-201ENST00000299345 KDM3BQ7LBC6 1761 aa16.23■□□□□ 0.19
CDH8-201ENST00000299345 SPATA31A3Q5VYP0 1347 aa16.22■□□□□ 0.19
CDH8-201ENST00000299345 LARGE1O95461 756 aa16.22■□□□□ 0.19
CDH8-201ENST00000299345 STK3Q13188 491 aa16.22■□□□□ 0.19
CDH8-201ENST00000299345 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.22■□□□□ 0.19
CDH8-201ENST00000299345 PTPN12Q05209 780 aaKnown RBP16.22■□□□□ 0.19
CDH8-201ENST00000299345 KRT32Q14532 448 aa16.22■□□□□ 0.19
CDH8-201ENST00000299345 DBNDD2Q9BQY9 259 aa16.22■□□□□ 0.19
CDH8-201ENST00000299345 DBNLQ9UJU6 430 aaKnown RBP16.22■□□□□ 0.19
CDH8-201ENST00000299345 MEGF6O75095 1541 aa16.22■□□□□ 0.19
CDH8-201ENST00000299345 ATP5JP18859 108 aa16.22■□□□□ 0.19
CDH8-201ENST00000299345 PLCB2Q00722 1185 aa16.22■□□□□ 0.19
CDH8-201ENST00000299345 DDX46Q7L014 1031 aaKnown RBP16.22■□□□□ 0.19
CDH8-201ENST00000299345 HMG20BQ9P0W2 317 aa16.22■□□□□ 0.19
CDH8-201ENST00000299345 NAP1L2Q9ULW6 460 aaPredicted RBP16.22■□□□□ 0.19
CDH8-201ENST00000299345 NDUFB9Q9Y6M9 179 aa16.22■□□□□ 0.19
CDH8-201ENST00000299345 ZNF142P52746 1687 aaPredicted RBP16.22■□□□□ 0.19
CDH8-201ENST00000299345 MST1RQ04912 1400 aa16.21■□□□□ 0.19
CDH8-201ENST00000299345 ME3Q16798 604 aa16.21■□□□□ 0.19
CDH8-201ENST00000299345 TAF7LQ5H9L4 462 aa16.21■□□□□ 0.19
CDH8-201ENST00000299345 PCDH11XQ9BZA7 1347 aa16.21■□□□□ 0.19
CDH8-201ENST00000299345 PCDH11YQ9BZA8 1340 aa16.21■□□□□ 0.19
CDH8-201ENST00000299345 UBE2HP62256 183 aa16.21■□□□□ 0.19
CDH8-201ENST00000299345 FERMT3Q86UX7 667 aa16.21■□□□□ 0.19
CDH8-201ENST00000299345 TNS3Q68CZ2 1445 aa16.2■□□□□ 0.18
CDH8-201ENST00000299345 CCDC183Q5T5S1 534 aa16.2■□□□□ 0.18
CDH8-201ENST00000299345 A1BGP04217 495 aa16.2■□□□□ 0.18
CDH8-201ENST00000299345 LETM1O95202 739 aaPredicted RBP16.2■□□□□ 0.18
CDH8-201ENST00000299345 DNM1Q05193 864 aaKnown RBP16.19■□□□□ 0.18
CDH8-201ENST00000299345 TTLL7Q6ZT98 887 aa16.19■□□□□ 0.18
CDH8-201ENST00000299345 U3KPZ7 1027 aaPredicted RBP16.19■□□□□ 0.18
CDH8-201ENST00000299345 ERBB4Q15303 1308 aa16.19■□□□□ 0.18
CDH8-201ENST00000299345 PDIA4P13667 645 aaKnown RBP16.19■□□□□ 0.18
CDH8-201ENST00000299345 ZNF589Q86UQ0 364 aaPredicted RBP16.19■□□□□ 0.18
CDH8-201ENST00000299345 TPCN1Q9ULQ1 816 aa16.19■□□□□ 0.18
CDH8-201ENST00000299345 RPS6KB1P23443 525 aa16.18■□□□□ 0.18
CDH8-201ENST00000299345 KRT85P78386 507 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms