RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 A0A0D9SFI3 127 aa16.35■□□□□ 0.21
BCCIP-202ENST00000299130 DDX58O95786 925 aaKnown RBP16.35■□□□□ 0.21
BCCIP-202ENST00000299130 CREB3L3Q68CJ9 461 aa16.35■□□□□ 0.21
BCCIP-202ENST00000299130 XAGE3Q8WTP9 111 aa16.35■□□□□ 0.21
BCCIP-202ENST00000299130 DDX17Q92841 729 aaKnown RBP16.35■□□□□ 0.21
BCCIP-202ENST00000299130 SYAP1Q96A49 352 aaPredicted RBP16.35■□□□□ 0.21
BCCIP-202ENST00000299130 NEURL1BA8MQ27 555 aa16.35■□□□□ 0.21
BCCIP-202ENST00000299130 FIBPO43427 364 aa16.35■□□□□ 0.21
BCCIP-202ENST00000299130 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
BCCIP-202ENST00000299130 EDC3Q96F86 508 aaKnown RBP16.35■□□□□ 0.21
BCCIP-202ENST00000299130 CYP46A1Q9Y6A2 500 aa16.35■□□□□ 0.21
BCCIP-202ENST00000299130 OFD1O75665 1012 aa16.34■□□□□ 0.21
BCCIP-202ENST00000299130 MAP4K1Q92918 833 aa16.34■□□□□ 0.21
BCCIP-202ENST00000299130 TCEANC2Q96MN5 208 aa16.34■□□□□ 0.21
BCCIP-202ENST00000299130 MYD88Q99836 296 aa16.34■□□□□ 0.21
BCCIP-202ENST00000299130 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
BCCIP-202ENST00000299130 TPCN1Q9ULQ1 816 aa16.34■□□□□ 0.21
BCCIP-202ENST00000299130 MTMR6Q9Y217 621 aa16.34■□□□□ 0.21
BCCIP-202ENST00000299130 TM6SF1Q9BZW5 370 aa16.34■□□□□ 0.21
BCCIP-202ENST00000299130 NLRP2Q9NX02 1062 aa16.34■□□□□ 0.21
BCCIP-202ENST00000299130 SLC27A2O14975 620 aa16.33■□□□□ 0.2
BCCIP-202ENST00000299130 DNM1Q05193 864 aaKnown RBP16.33■□□□□ 0.2
BCCIP-202ENST00000299130 GCKRQ14397 625 aa16.33■□□□□ 0.2
BCCIP-202ENST00000299130 ZNF496Q96IT1 587 aaPredicted RBP16.33■□□□□ 0.2
BCCIP-202ENST00000299130 HDAC5Q9UQL6 1122 aa16.33■□□□□ 0.2
BCCIP-202ENST00000299130 USP16Q9Y5T5 823 aa16.33■□□□□ 0.2
BCCIP-202ENST00000299130 NPHP3Q7Z494 1330 aa16.33■□□□□ 0.2
BCCIP-202ENST00000299130 PROSER2Q86WR7 435 aaPredicted RBP16.33■□□□□ 0.2
BCCIP-202ENST00000299130 ZKSCAN5Q9Y2L8 839 aa16.33■□□□□ 0.2
BCCIP-202ENST00000299130 PHKG2P15735 406 aa16.32■□□□□ 0.2
BCCIP-202ENST00000299130 KCNJ4P48050 445 aa16.32■□□□□ 0.2
BCCIP-202ENST00000299130 LARP1Q6PKG0 1096 aaKnown RBP16.32■□□□□ 0.2
BCCIP-202ENST00000299130 ZNF589Q86UQ0 364 aaPredicted RBP16.32■□□□□ 0.2
BCCIP-202ENST00000299130 FSD1Q9BTV5 496 aa16.32■□□□□ 0.2
BCCIP-202ENST00000299130 NDUFB9Q9Y6M9 179 aa16.32■□□□□ 0.2
BCCIP-202ENST00000299130 C1orf167Q5SNV9 1468 aa16.32■□□□□ 0.2
BCCIP-202ENST00000299130 ZNF500O60304 480 aaPredicted RBP16.31■□□□□ 0.2
BCCIP-202ENST00000299130 CHGBP05060 677 aa16.31■□□□□ 0.2
BCCIP-202ENST00000299130 CCDC183Q5T5S1 534 aa16.31■□□□□ 0.2
BCCIP-202ENST00000299130 LRP10Q7Z4F1 713 aa16.31■□□□□ 0.2
BCCIP-202ENST00000299130 MPNDQ8N594 471 aa16.31■□□□□ 0.2
BCCIP-202ENST00000299130 RAPGEF4Q8WZA2 1011 aa16.31■□□□□ 0.2
BCCIP-202ENST00000299130 ZKSCAN1P17029 563 aaPredicted RBP16.31■□□□□ 0.2
BCCIP-202ENST00000299130 UBE2HP62256 183 aa16.31■□□□□ 0.2
BCCIP-202ENST00000299130 ZSCAN31Q96LW9 406 aaPredicted RBP16.31■□□□□ 0.2
BCCIP-202ENST00000299130 METTL22Q9BUU2 404 aaPredicted RBP16.31■□□□□ 0.2
BCCIP-202ENST00000299130 MEGF6O75095 1541 aa16.31■□□□□ 0.2
BCCIP-202ENST00000299130 SCN11AQ9UI33 1791 aa16.3■□□□□ 0.2
BCCIP-202ENST00000299130 VPS37CA5D8V6 355 aaPredicted RBP16.3■□□□□ 0.2
BCCIP-202ENST00000299130 SNRKQ9NRH2 765 aa16.3■□□□□ 0.2
BCCIP-202ENST00000299130 PHF14O94880 888 aa16.3■□□□□ 0.2
BCCIP-202ENST00000299130 NEXNQ0ZGT2 675 aa16.3■□□□□ 0.2
BCCIP-202ENST00000299130 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
BCCIP-202ENST00000299130 SH2B1Q9NRF2 756 aaPredicted RBP16.3■□□□□ 0.2
BCCIP-202ENST00000299130 CCDC39Q9UFE4 941 aa16.3■□□□□ 0.2
BCCIP-202ENST00000299130 HCLS1P14317 486 aaPredicted RBP16.29■□□□□ 0.2
BCCIP-202ENST00000299130 COL15A1P39059 1388 aa16.29■□□□□ 0.2
BCCIP-202ENST00000299130 MED23Q9ULK4 1368 aa16.29■□□□□ 0.2
BCCIP-202ENST00000299130 RFX5P48382 616 aaPredicted RBP16.29■□□□□ 0.2
BCCIP-202ENST00000299130 ANKRD13DQ6ZTN6 518 aa16.29■□□□□ 0.2
BCCIP-202ENST00000299130 HIP1O00291 1037 aa16.28■□□□□ 0.2
BCCIP-202ENST00000299130 TATP17735 454 aaPredicted RBP16.28■□□□□ 0.2
BCCIP-202ENST00000299130 TFCP2Q12800 502 aa16.28■□□□□ 0.2
BCCIP-202ENST00000299130 FAM173BQ6P4H8 233 aa16.28■□□□□ 0.2
BCCIP-202ENST00000299130 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
BCCIP-202ENST00000299130 DBNLQ9UJU6 430 aaKnown RBP16.28■□□□□ 0.2
BCCIP-202ENST00000299130 LMTK3Q96Q04 1460 aa16.28■□□□□ 0.2
BCCIP-202ENST00000299130 ATP5J2-PTCD1G3V325 749 aa16.28■□□□□ 0.2
BCCIP-202ENST00000299130 PTCD1O75127 700 aaKnown RBP16.28■□□□□ 0.2
BCCIP-202ENST00000299130 PTPN12Q05209 780 aaKnown RBP16.28■□□□□ 0.2
BCCIP-202ENST00000299130 TOB2Q14106 344 aaPredicted RBP16.28■□□□□ 0.2
BCCIP-202ENST00000299130 CHRNA2Q15822 529 aa16.28■□□□□ 0.2
BCCIP-202ENST00000299130 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.28■□□□□ 0.2
BCCIP-202ENST00000299130 CDC37L1Q7L3B6 337 aa16.28■□□□□ 0.2
BCCIP-202ENST00000299130 USP25Q9UHP3 1055 aa16.28■□□□□ 0.2
BCCIP-202ENST00000299130 R3HCC1Q9Y3T6 440 aaKnown RBP16.28■□□□□ 0.2
BCCIP-202ENST00000299130 MRC1P22897 1456 aa16.27■□□□□ 0.2
BCCIP-202ENST00000299130 ALS2Q96Q42 1657 aa16.27■□□□□ 0.2
BCCIP-202ENST00000299130 CYP27B1O15528 508 aa16.27■□□□□ 0.2
BCCIP-202ENST00000299130 UBE3BQ7Z3V4 1068 aa16.27■□□□□ 0.2
BCCIP-202ENST00000299130 FERMT3Q86UX7 667 aa16.27■□□□□ 0.2
BCCIP-202ENST00000299130 UBE2Q2Q8WVN8 375 aa16.27■□□□□ 0.2
BCCIP-202ENST00000299130 ATP6V1DQ9Y5K8 247 aa16.27■□□□□ 0.2
BCCIP-202ENST00000299130 TAF5LO75529 589 aa16.26■□□□□ 0.19
BCCIP-202ENST00000299130 TPM2P07951 284 aa16.26■□□□□ 0.19
BCCIP-202ENST00000299130 RPS6KB1P23443 525 aa16.26■□□□□ 0.19
BCCIP-202ENST00000299130 LARP1BQ659C4 914 aaKnown RBP16.26■□□□□ 0.19
BCCIP-202ENST00000299130 BLOC1S2Q6QNY1 142 aa16.26■□□□□ 0.19
BCCIP-202ENST00000299130 CCDC129Q6ZRS4 1044 aa16.26■□□□□ 0.19
BCCIP-202ENST00000299130 FUCA2Q9BTY2 467 aa16.26■□□□□ 0.19
BCCIP-202ENST00000299130 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.26■□□□□ 0.19
BCCIP-202ENST00000299130 PTMAP06454 111 aaKnown RBP16.25■□□□□ 0.19
BCCIP-202ENST00000299130 CSB-PGBD3P0DP91 1061 aa16.25■□□□□ 0.19
BCCIP-202ENST00000299130 STK3Q13188 491 aa16.25■□□□□ 0.19
BCCIP-202ENST00000299130 TNNI3KQ59H18 835 aa16.25■□□□□ 0.19
BCCIP-202ENST00000299130 IFNL2Q8IZJ0 200 aa16.25■□□□□ 0.19
BCCIP-202ENST00000299130 ZNF830Q96NB3 372 aaPredicted RBP16.25■□□□□ 0.19
BCCIP-202ENST00000299130 SEC62Q99442 399 aaKnown RBP16.25■□□□□ 0.19
BCCIP-202ENST00000299130 COPRSQ9NQ92 184 aa16.25■□□□□ 0.19
BCCIP-202ENST00000299130 FPGT-TNNI3KV9GXZ4 949 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms