RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 AMHR2Q16671 573 aa7.76□□□□□ -1.17
SSX3-201ENST00000298396 DMRTA1Q5VZB9 504 aa7.76□□□□□ -1.17
SSX3-201ENST00000298396 SLC4A9Q96Q91 983 aa7.76□□□□□ -1.17
SSX3-201ENST00000298396 ATG3Q9NT62 314 aa7.76□□□□□ -1.17
SSX3-201ENST00000298396 TRIM66O15016 1216 aa7.75□□□□□ -1.17
SSX3-201ENST00000298396 ZNF853P0CG23 659 aa7.75□□□□□ -1.17
SSX3-201ENST00000298396 CCDC27Q2M243 656 aa7.75□□□□□ -1.17
SSX3-201ENST00000298396 DEFB132Q7Z7B7 95 aa7.75□□□□□ -1.17
SSX3-201ENST00000298396 WWC1Q8IX03 1113 aa7.75□□□□□ -1.17
SSX3-201ENST00000298396 SYTL4Q96C24 671 aaPredicted RBP7.75□□□□□ -1.17
SSX3-201ENST00000298396 CAMKK2Q96RR4 588 aa7.75□□□□□ -1.17
SSX3-201ENST00000298396 TMOD3Q9NYL9 352 aa7.75□□□□□ -1.17
SSX3-201ENST00000298396 MIS18AQ9NYP9 233 aa7.75□□□□□ -1.17
SSX3-201ENST00000298396 SALL2Q9Y467 1007 aaPredicted RBP7.75□□□□□ -1.17
SSX3-201ENST00000298396 CASZ1Q86V15 1759 aa7.74□□□□□ -1.17
SSX3-201ENST00000298396 PALLDQ8WX93 1383 aa7.74□□□□□ -1.17
SSX3-201ENST00000298396 NEFMP07197 916 aa7.74□□□□□ -1.17
SSX3-201ENST00000298396 KCNQ4P56696 695 aa7.74□□□□□ -1.17
SSX3-201ENST00000298396 CABP4P57796 275 aa7.74□□□□□ -1.17
SSX3-201ENST00000298396 PROX2Q3B8N5 592 aa7.74□□□□□ -1.17
SSX3-201ENST00000298396 CDAN1Q8IWY9 1227 aa7.74□□□□□ -1.17
SSX3-201ENST00000298396 TMUB1Q9BVT8 246 aa7.74□□□□□ -1.17
SSX3-201ENST00000298396 KRTAP3-3Q9BYR6 98 aa7.74□□□□□ -1.17
SSX3-201ENST00000298396 KRTAP3-2Q9BYR7 98 aa7.74□□□□□ -1.17
SSX3-201ENST00000298396 LRRC4BQ9NT99 713 aa7.74□□□□□ -1.17
SSX3-201ENST00000298396 VPS9D1Q9Y2B5 631 aa7.74□□□□□ -1.17
SSX3-201ENST00000298396 BCORQ6W2J9 1755 aa7.74□□□□□ -1.17
SSX3-201ENST00000298396 HEG1Q9ULI3 1381 aa7.73□□□□□ -1.17
SSX3-201ENST00000298396 COL24A1Q17RW2 1714 aa7.73□□□□□ -1.17
SSX3-201ENST00000298396 C3orf80F5H4A9 247 aa7.73□□□□□ -1.17
SSX3-201ENST00000298396 CHL1O00533 1208 aa7.73□□□□□ -1.17
SSX3-201ENST00000298396 PLSCR1O15162 318 aa7.73□□□□□ -1.17
SSX3-201ENST00000298396 APBA3O96018 575 aa7.73□□□□□ -1.17
SSX3-201ENST00000298396 OATP04181 439 aa7.73□□□□□ -1.17
SSX3-201ENST00000298396 LSM11P83369 360 aaKnown RBP eCLIP7.73□□□□□ -1.17
SSX3-201ENST00000298396 TEFQ10587 303 aa7.73□□□□□ -1.17
SSX3-201ENST00000298396 TAF7Q15545 349 aaPredicted RBP7.73□□□□□ -1.17
SSX3-201ENST00000298396 EZH2Q15910 746 aaKnown RBP7.73□□□□□ -1.17
SSX3-201ENST00000298396 METTL3Q86U44 580 aaKnown RBP7.73□□□□□ -1.17
SSX3-201ENST00000298396 PXYLP1Q8TE99 480 aa7.73□□□□□ -1.17
SSX3-201ENST00000298396 RTF1Q92541 710 aaKnown RBP7.73□□□□□ -1.17
SSX3-201ENST00000298396 RABGEF1Q9UJ41 708 aa7.73□□□□□ -1.17
SSX3-201ENST00000298396 NUP98P52948 1817 aa7.73□□□□□ -1.17
SSX3-201ENST00000298396 PRAMEF22A3QJZ6 481 aa7.72□□□□□ -1.17
SSX3-201ENST00000298396 BTBD11A6QL63 1104 aa7.72□□□□□ -1.17
SSX3-201ENST00000298396 BHMG1C9JSJ3 638 aaPredicted RBP7.72□□□□□ -1.17
SSX3-201ENST00000298396 LMOD3Q0VAK6 560 aa7.72□□□□□ -1.17
SSX3-201ENST00000298396 ITPK1Q13572 414 aa7.72□□□□□ -1.17
SSX3-201ENST00000298396 KRT24Q2M2I5 525 aa7.72□□□□□ -1.17
SSX3-201ENST00000298396 ZNF790Q6PG37 636 aa7.72□□□□□ -1.17
SSX3-201ENST00000298396 ZNF496Q96IT1 587 aaPredicted RBP7.72□□□□□ -1.17
SSX3-201ENST00000298396 MBIPQ9NS73 344 aa7.72□□□□□ -1.17
SSX3-201ENST00000298396 LOC102724428A0A0B4J2F2 783 aa7.71□□□□□ -1.18
SSX3-201ENST00000298396 NBPF26B4DH59 902 aa7.71□□□□□ -1.18
SSX3-201ENST00000298396 SOCS7O14512 581 aa7.71□□□□□ -1.18
SSX3-201ENST00000298396 HRO43593 1189 aa7.71□□□□□ -1.18
SSX3-201ENST00000298396 SIK1P57059 783 aa7.71□□□□□ -1.18
SSX3-201ENST00000298396 EIF4A1P60842 406 aaKnown RBP7.71□□□□□ -1.18
SSX3-201ENST00000298396 HNRNPUQ00839 825 aaKnown RBP eCLIP7.71□□□□□ -1.18
SSX3-201ENST00000298396 TXNRD1Q16881 649 aa7.71□□□□□ -1.18
SSX3-201ENST00000298396 AMIGO3Q86WK7 504 aa7.71□□□□□ -1.18
SSX3-201ENST00000298396 CCDC125Q86Z20 511 aa7.71□□□□□ -1.18
SSX3-201ENST00000298396 WDR63Q8IWG1 891 aa7.71□□□□□ -1.18
SSX3-201ENST00000298396 KRI1Q8N9T8 703 aaKnown RBP7.71□□□□□ -1.18
SSX3-201ENST00000298396 LINC00116Q8NCU8 138 aa7.71□□□□□ -1.18
SSX3-201ENST00000298396 TSR2Q969E8 191 aaKnown RBP7.71□□□□□ -1.18
SSX3-201ENST00000298396 PHOX2BQ99453 314 aa7.71□□□□□ -1.18
SSX3-201ENST00000298396 IFT57Q9NWB7 429 aa7.71□□□□□ -1.18
SSX3-201ENST00000298396 IL16Q14005 1332 aa7.71□□□□□ -1.18
SSX3-201ENST00000298396 SCN7AQ01118 1682 aa7.7□□□□□ -1.18
SSX3-201ENST00000298396 ANKRD36CQ5JPF3 1778 aa7.7□□□□□ -1.18
SSX3-201ENST00000298396 ARFGEF2Q9Y6D5 1785 aa7.7□□□□□ -1.18
SSX3-201ENST00000298396 PTCD1O75127 700 aaKnown RBP7.7□□□□□ -1.18
SSX3-201ENST00000298396 BAG6P46379 1132 aa7.7□□□□□ -1.18
SSX3-201ENST00000298396 BRPF1P55201 1214 aaPredicted RBP7.7□□□□□ -1.18
SSX3-201ENST00000298396 PACS2Q86VP3 889 aa7.7□□□□□ -1.18
SSX3-201ENST00000298396 TRMT2AQ8IZ69 625 aaKnown RBP7.7□□□□□ -1.18
SSX3-201ENST00000298396 NGEFQ8N5V2 710 aa7.7□□□□□ -1.18
SSX3-201ENST00000298396 SMARCC1Q92922 1105 aaPredicted RBP7.7□□□□□ -1.18
SSX3-201ENST00000298396 TATDN2Q93075 761 aa7.7□□□□□ -1.18
SSX3-201ENST00000298396 BABAM1Q9NWV8 329 aa7.7□□□□□ -1.18
SSX3-201ENST00000298396 TSPYL4Q9UJ04 414 aa7.7□□□□□ -1.18
SSX3-201ENST00000298396 LAS1LQ9Y4W2 734 aaKnown RBP7.7□□□□□ -1.18
SSX3-201ENST00000298396 ZBED9Q6R2W3 1325 aa7.7□□□□□ -1.18
SSX3-201ENST00000298396 FANCIQ9NVI1 1328 aa7.7□□□□□ -1.18
SSX3-201ENST00000298396 GNAI1P63096 354 aa7.69□□□□□ -1.18
SSX3-201ENST00000298396 PDE4DQ08499 809 aa7.69□□□□□ -1.18
SSX3-201ENST00000298396 SLFN5Q08AF3 891 aa7.69□□□□□ -1.18
SSX3-201ENST00000298396 ZNF827Q17R98 1081 aa7.69□□□□□ -1.18
SSX3-201ENST00000298396 ADGRD1Q6QNK2 874 aa7.69□□□□□ -1.18
SSX3-201ENST00000298396 DNAJC10Q8IXB1 793 aa7.69□□□□□ -1.18
SSX3-201ENST00000298396 TSPYL6Q8N831 410 aa7.69□□□□□ -1.18
SSX3-201ENST00000298396 RBM46Q8TBY0 533 aaKnown RBP7.69□□□□□ -1.18
SSX3-201ENST00000298396 KIAA1468Q9P260 1216 aa7.69□□□□□ -1.18
SSX3-201ENST00000298396 CCNL1Q9UK58 526 aaPredicted RBP7.69□□□□□ -1.18
SSX3-201ENST00000298396 N4BP2Q86UW6 1770 aaPredicted RBP7.69□□□□□ -1.18
SSX3-201ENST00000298396 AFDNP55196 1824 aaKnown RBP7.68□□□□□ -1.18
SSX3-201ENST00000298396 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.68□□□□□ -1.18
SSX3-201ENST00000298396 GIGYF1O75420 1035 aaPredicted RBP7.68□□□□□ -1.18
SSX3-201ENST00000298396 ATP6V1AP38606 617 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms