RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 IFFO1Q0D2I5 559 aa16.38■□□□□ 0.21
COL1A2-201ENST00000297268 RBM8AQ9Y5S9 174 aaKnown RBP16.38■□□□□ 0.21
COL1A2-201ENST00000297268 URB2Q14146 1524 aaKnown RBP16.38■□□□□ 0.21
COL1A2-201ENST00000297268 POLR3AO14802 1390 aaPredicted RBP16.38■□□□□ 0.21
COL1A2-201ENST00000297268 BCCIPQ9P287 314 aaKnown RBP eCLIP16.38■□□□□ 0.21
COL1A2-201ENST00000297268 IGHMBP2P38935 993 aaKnown RBP16.37■□□□□ 0.21
COL1A2-201ENST00000297268 C8orf58Q8NAV2 365 aa16.37■□□□□ 0.21
COL1A2-201ENST00000297268 KCNH5Q8NCM2 988 aa16.37■□□□□ 0.21
COL1A2-201ENST00000297268 TSG101Q99816 390 aa16.37■□□□□ 0.21
COL1A2-201ENST00000297268 SYKP43405 635 aa16.37■□□□□ 0.21
COL1A2-201ENST00000297268 CCDC144CPQ8IYA2 1237 aa16.37■□□□□ 0.21
COL1A2-201ENST00000297268 FBLN1P23142 703 aa16.37■□□□□ 0.21
COL1A2-201ENST00000297268 HAND2P61296 217 aa16.37■□□□□ 0.21
COL1A2-201ENST00000297268 TMEM132AQ24JP5 1023 aa16.37■□□□□ 0.21
COL1A2-201ENST00000297268 TDRD12Q587J7 1177 aaKnown RBP16.37■□□□□ 0.21
COL1A2-201ENST00000297268 DCTPP1Q9H773 170 aa16.37■□□□□ 0.21
COL1A2-201ENST00000297268 GPATCH11Q8N954 259 aa16.37■□□□□ 0.21
COL1A2-201ENST00000297268 CTCFLQ8NI51 663 aaPredicted RBP16.37■□□□□ 0.21
COL1A2-201ENST00000297268 PRAG1Q86YV5 1406 aa16.37■□□□□ 0.21
COL1A2-201ENST00000297268 USP5P45974 858 aa16.36■□□□□ 0.21
COL1A2-201ENST00000297268 AMOTQ4VCS5 1084 aa16.36■□□□□ 0.21
COL1A2-201ENST00000297268 A0A087WZG4 1122 aa16.36■□□□□ 0.21
COL1A2-201ENST00000297268 IGSF3O75054 1194 aa16.36■□□□□ 0.21
COL1A2-201ENST00000297268 PLEKHM2Q8IWE5 1019 aa16.36■□□□□ 0.21
COL1A2-201ENST00000297268 MRPS27Q92552 414 aaKnown RBP16.36■□□□□ 0.21
COL1A2-201ENST00000297268 ALS2CR12Q96Q35 445 aa16.36■□□□□ 0.21
COL1A2-201ENST00000297268 USP26Q9BXU7 913 aa16.36■□□□□ 0.21
COL1A2-201ENST00000297268 TTC21BQ7Z4L5 1316 aa16.36■□□□□ 0.21
COL1A2-201ENST00000297268 GBP2P32456 591 aaPredicted RBP16.36■□□□□ 0.21
COL1A2-201ENST00000297268 LRRC2Q9BYS8 371 aa16.36■□□□□ 0.21
COL1A2-201ENST00000297268 ZC3H6P61129 1189 aaKnown RBP16.36■□□□□ 0.21
COL1A2-201ENST00000297268 MTIF2P46199 727 aaKnown RBP16.35■□□□□ 0.21
COL1A2-201ENST00000297268 MAP3K12Q12852 859 aa16.35■□□□□ 0.21
COL1A2-201ENST00000297268 KANK3Q6NY19 840 aa16.35■□□□□ 0.21
COL1A2-201ENST00000297268 INTS4Q96HW7 963 aaKnown RBP16.35■□□□□ 0.21
COL1A2-201ENST00000297268 METAP2P50579 478 aaKnown RBP eCLIP16.35■□□□□ 0.21
COL1A2-201ENST00000297268 AK2P54819 239 aa16.35■□□□□ 0.21
COL1A2-201ENST00000297268 MICU3Q86XE3 530 aa16.35■□□□□ 0.21
COL1A2-201ENST00000297268 SYT1P21579 422 aa16.35■□□□□ 0.21
COL1A2-201ENST00000297268 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
COL1A2-201ENST00000297268 JADE2Q9NQC1 790 aa16.35■□□□□ 0.21
COL1A2-201ENST00000297268 IFIT5Q13325 482 aaKnown RBP16.35■□□□□ 0.21
COL1A2-201ENST00000297268 HLTFQ14527 1009 aaKnown RBP eCLIP16.35■□□□□ 0.21
COL1A2-201ENST00000297268 MCM6Q14566 821 aa16.35■□□□□ 0.21
COL1A2-201ENST00000297268 KCNG4Q8TDN1 519 aa16.35■□□□□ 0.21
COL1A2-201ENST00000297268 GOPCQ9HD26 462 aa16.35■□□□□ 0.21
COL1A2-201ENST00000297268 RANBP6O60518 1105 aaKnown RBP16.34■□□□□ 0.21
COL1A2-201ENST00000297268 FGFR1OPO95684 399 aaKnown RBP16.34■□□□□ 0.21
COL1A2-201ENST00000297268 HSP90AA4PQ58FG1 418 aa16.34■□□□□ 0.21
COL1A2-201ENST00000297268 NAA15Q9BXJ9 866 aaKnown RBP16.34■□□□□ 0.21
COL1A2-201ENST00000297268 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
COL1A2-201ENST00000297268 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
COL1A2-201ENST00000297268 NLRP5P59047 1200 aa16.34■□□□□ 0.21
COL1A2-201ENST00000297268 NCOA7Q8NI08 942 aa16.34■□□□□ 0.21
COL1A2-201ENST00000297268 IPO4Q8TEX9 1081 aaKnown RBP16.34■□□□□ 0.21
COL1A2-201ENST00000297268 SRRTQ9BXP5 876 aaKnown RBP16.34■□□□□ 0.21
COL1A2-201ENST00000297268 PTCD1O75127 700 aaKnown RBP16.34■□□□□ 0.21
COL1A2-201ENST00000297268 TMEM67Q5HYA8 995 aa16.34■□□□□ 0.21
COL1A2-201ENST00000297268 VPS36Q86VN1 386 aa16.34■□□□□ 0.21
COL1A2-201ENST00000297268 SMAP1Q8IYB5 467 aaPredicted RBP16.34■□□□□ 0.21
COL1A2-201ENST00000297268 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL1A2-201ENST00000297268 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
COL1A2-201ENST00000297268 OGFRQ9NZT2 677 aa16.34■□□□□ 0.21
COL1A2-201ENST00000297268 N4BP3O15049 544 aa16.33■□□□□ 0.21
COL1A2-201ENST00000297268 MATR3P43243 847 aaKnown RBP eCLIP16.33■□□□□ 0.21
COL1A2-201ENST00000297268 CEP85Q6P2H3 762 aa16.33■□□□□ 0.21
COL1A2-201ENST00000297268 IQCA1Q86XH1 822 aa16.33■□□□□ 0.21
COL1A2-201ENST00000297268 CTAGE15A4D2H0 777 aa16.33■□□□□ 0.21
COL1A2-201ENST00000297268 PPP1R12BO60237 982 aaPredicted RBP16.33■□□□□ 0.21
COL1A2-201ENST00000297268 TUBB4AP04350 444 aa16.33■□□□□ 0.21
COL1A2-201ENST00000297268 CTAGE8P0CG41 777 aa16.33■□□□□ 0.21
COL1A2-201ENST00000297268 CTAGE6Q86UF2 777 aa16.33■□□□□ 0.21
COL1A2-201ENST00000297268 CTAGE4Q8IX94 777 aa16.33■□□□□ 0.21
COL1A2-201ENST00000297268 RNF41Q9H4P4 317 aaPredicted RBP16.33■□□□□ 0.21
COL1A2-201ENST00000297268 SEC63Q9UGP8 760 aaKnown RBP16.33■□□□□ 0.21
COL1A2-201ENST00000297268 UGGT2Q9NYU1 1516 aa16.33■□□□□ 0.2
COL1A2-201ENST00000297268 PIK3C2GO75747 1445 aa16.33■□□□□ 0.2
COL1A2-201ENST00000297268 KLHL34Q8N239 644 aa16.33■□□□□ 0.2
COL1A2-201ENST00000297268 SNRKQ9NRH2 765 aa16.33■□□□□ 0.2
COL1A2-201ENST00000297268 IVLP07476 585 aa16.33■□□□□ 0.2
COL1A2-201ENST00000297268 TESK2Q96S53 571 aa16.33■□□□□ 0.2
COL1A2-201ENST00000297268 SLC26A6Q9BXS9 759 aa16.33■□□□□ 0.2
COL1A2-201ENST00000297268 RSPH14Q9UHP6 348 aa16.33■□□□□ 0.2
COL1A2-201ENST00000297268 Q6ZUG5 572 aa16.32■□□□□ 0.2
COL1A2-201ENST00000297268 KLF18A0A0U1RQI7 1052 aa16.32■□□□□ 0.2
COL1A2-201ENST00000297268 CCDC194A0A1B0GVG4 234 aa16.32■□□□□ 0.2
COL1A2-201ENST00000297268 ZNF76P36508 570 aa16.32■□□□□ 0.2
COL1A2-201ENST00000297268 SPECC1Q5M775 1068 aa16.32■□□□□ 0.2
COL1A2-201ENST00000297268 FEZ1Q99689 392 aa16.32■□□□□ 0.2
COL1A2-201ENST00000297268 NUP160Q12769 1436 aa16.32■□□□□ 0.2
COL1A2-201ENST00000297268 RNF123Q5XPI4 1314 aa16.32■□□□□ 0.2
COL1A2-201ENST00000297268 DDX46Q7L014 1031 aaKnown RBP16.32■□□□□ 0.2
COL1A2-201ENST00000297268 MAATS1Q7Z4T9 603 aa16.32■□□□□ 0.2
COL1A2-201ENST00000297268 SSR1P43307 286 aaKnown RBP16.32■□□□□ 0.2
COL1A2-201ENST00000297268 VAMP4O75379 141 aa16.32■□□□□ 0.2
COL1A2-201ENST00000297268 STARD3NLO95772 234 aa16.32■□□□□ 0.2
COL1A2-201ENST00000297268 ANXA1P04083 346 aa16.32■□□□□ 0.2
COL1A2-201ENST00000297268 EZRP15311 586 aaKnown RBP16.31■□□□□ 0.2
COL1A2-201ENST00000297268 IDI1Q13907 227 aa16.31■□□□□ 0.2
COL1A2-201ENST00000297268 TICAM2Q86XR7 235 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms