RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 CWC25Q9NXE8 425 aaPredicted RBP27.51■■□□□ 1.99
PDLIM3-203ENST00000284771 IBTKQ9P2D0 1353 aaPredicted RBP27.51■■□□□ 1.99
PDLIM3-203ENST00000284771 NFIXQ14938 502 aa27.49■■□□□ 1.99
PDLIM3-203ENST00000284771 SUSD4Q5VX71 490 aa27.49■■□□□ 1.99
PDLIM3-203ENST00000284771 GRM8O00222 908 aa27.49■■□□□ 1.99
PDLIM3-203ENST00000284771 UTYO14607 1347 aa27.48■■□□□ 1.99
PDLIM3-203ENST00000284771 TM4SF1P30408 202 aa27.48■■□□□ 1.99
PDLIM3-203ENST00000284771 SYNE4Q8N205 404 aa27.48■■□□□ 1.99
PDLIM3-203ENST00000284771 C9orf78Q9NZ63 289 aaPredicted RBP27.48■■□□□ 1.99
PDLIM3-203ENST00000284771 H7C1W4 665 aa27.47■■□□□ 1.99
PDLIM3-203ENST00000284771 CASP7P55210 303 aa27.47■■□□□ 1.99
PDLIM3-203ENST00000284771 R3HDM1Q15032 1099 aaKnown RBP27.47■■□□□ 1.99
PDLIM3-203ENST00000284771 RTL5Q5HYW3 569 aaPredicted RBP27.46■■□□□ 1.99
PDLIM3-203ENST00000284771 SETDB2Q96T68 719 aa27.46■■□□□ 1.99
PDLIM3-203ENST00000284771 FAM177BA6PVY3 158 aa27.46■■□□□ 1.99
PDLIM3-203ENST00000284771 PARP10Q53GL7 1025 aa27.46■■□□□ 1.99
PDLIM3-203ENST00000284771 FAM89AQ96GI7 184 aa27.46■■□□□ 1.99
PDLIM3-203ENST00000284771 C1orf115Q9H7X2 142 aa27.46■■□□□ 1.99
PDLIM3-203ENST00000284771 UBE3BQ7Z3V4 1068 aa27.45■■□□□ 1.98
PDLIM3-203ENST00000284771 NLGN1Q8N2Q7 840 aa27.45■■□□□ 1.98
PDLIM3-203ENST00000284771 MSL1Q68DK7 614 aa27.44■■□□□ 1.98
PDLIM3-203ENST00000284771 ZBTB38Q8NAP3 1195 aaPredicted RBP27.44■■□□□ 1.98
PDLIM3-203ENST00000284771 KAZALD1Q96I82 304 aa27.44■■□□□ 1.98
PDLIM3-203ENST00000284771 NTSR2O95665 410 aa27.43■■□□□ 1.98
PDLIM3-203ENST00000284771 COL24A1Q17RW2 1714 aa27.43■■□□□ 1.98
PDLIM3-203ENST00000284771 TRMT112Q9UI30 125 aaKnown RBP27.43■■□□□ 1.98
PDLIM3-203ENST00000284771 PCCAP05165 728 aaPredicted RBP27.43■■□□□ 1.98
PDLIM3-203ENST00000284771 GNAI3P08754 354 aa27.43■■□□□ 1.98
PDLIM3-203ENST00000284771 DDR1Q08345 913 aa27.43■■□□□ 1.98
PDLIM3-203ENST00000284771 UBTFL1P0CB47 393 aaPredicted RBP27.42■■□□□ 1.98
PDLIM3-203ENST00000284771 UTP14AQ9BVJ6 771 aaKnown RBP27.42■■□□□ 1.98
PDLIM3-203ENST00000284771 PSDA5PKW4 1024 aaPredicted RBP27.41■■□□□ 1.98
PDLIM3-203ENST00000284771 NUTM1Q86Y26 1132 aa27.41■■□□□ 1.98
PDLIM3-203ENST00000284771 SUCLG2Q96I99 432 aa27.41■■□□□ 1.98
PDLIM3-203ENST00000284771 PPP1R42Q7Z4L9 355 aa27.4■■□□□ 1.98
PDLIM3-203ENST00000284771 PCDHB15Q9Y5E8 787 aa27.4■■□□□ 1.98
PDLIM3-203ENST00000284771 LRRFIP2Q9Y608 721 aaKnown RBP27.4■■□□□ 1.98
PDLIM3-203ENST00000284771 CASZ1Q86V15 1759 aa27.4■■□□□ 1.98
PDLIM3-203ENST00000284771 POLRMTO00411 1230 aaKnown RBP27.4■■□□□ 1.98
PDLIM3-203ENST00000284771 EPHA10Q5JZY3 1008 aa27.4■■□□□ 1.98
PDLIM3-203ENST00000284771 CHMP4BQ9H444 224 aaKnown RBP27.4■■□□□ 1.98
PDLIM3-203ENST00000284771 GTF3C3Q9Y5Q9 886 aa27.4■■□□□ 1.98
PDLIM3-203ENST00000284771 CARMIL3Q8ND23 1372 aa27.39■■□□□ 1.98
PDLIM3-203ENST00000284771 GNAI2P04899 355 aa27.39■■□□□ 1.97
PDLIM3-203ENST00000284771 NBPF5PQ86XG9 351 aaPredicted RBP27.38■■□□□ 1.97
PDLIM3-203ENST00000284771 SLC16A10Q8TF71 515 aa27.38■■□□□ 1.97
PDLIM3-203ENST00000284771 MMP10P09238 476 aa27.37■■□□□ 1.97
PDLIM3-203ENST00000284771 SH3TC1Q8TE82 1336 aa27.37■■□□□ 1.97
PDLIM3-203ENST00000284771 CDHR2Q9BYE9 1310 aa27.37■■□□□ 1.97
PDLIM3-203ENST00000284771 SERPINB2P05120 415 aa27.36■■□□□ 1.97
PDLIM3-203ENST00000284771 AAMPQ13685 434 aa27.36■■□□□ 1.97
PDLIM3-203ENST00000284771 ERFEQ4G0M1 354 aa27.36■■□□□ 1.97
PDLIM3-203ENST00000284771 ERICH6BQ5W0A0 696 aa27.36■■□□□ 1.97
PDLIM3-203ENST00000284771 CCDC24Q8N4L8 307 aa27.36■■□□□ 1.97
PDLIM3-203ENST00000284771 TPTE2Q6XPS3 522 aa27.36■■□□□ 1.97
PDLIM3-203ENST00000284771 IRS4O14654 1257 aaPredicted RBP27.35■■□□□ 1.97
PDLIM3-203ENST00000284771 FOXO4P98177 505 aa27.35■■□□□ 1.97
PDLIM3-203ENST00000284771 SIRT2Q8IXJ6 389 aa27.35■■□□□ 1.97
PDLIM3-203ENST00000284771 BICC1Q9H694 974 aaKnown RBP27.35■■□□□ 1.97
PDLIM3-203ENST00000284771 ZBTB7AO95365 584 aa27.34■■□□□ 1.97
PDLIM3-203ENST00000284771 HCLS1P14317 486 aaPredicted RBP27.34■■□□□ 1.97
PDLIM3-203ENST00000284771 PRR5LQ6MZQ0 368 aa27.33■■□□□ 1.97
PDLIM3-203ENST00000284771 CEP85Q6P2H3 762 aa27.33■■□□□ 1.97
PDLIM3-203ENST00000284771 ANKRD44Q8N8A2 993 aa27.33■■□□□ 1.97
PDLIM3-203ENST00000284771 PLA2G12BQ9BX93 195 aa27.33■■□□□ 1.97
PDLIM3-203ENST00000284771 NYXQ9GZU5 481 aa27.33■■□□□ 1.97
PDLIM3-203ENST00000284771 ABCC12Q96J65 1359 aa27.33■■□□□ 1.97
PDLIM3-203ENST00000284771 SOCS7O14512 581 aa27.33■■□□□ 1.97
PDLIM3-203ENST00000284771 DDX60Q8IY21 1712 aaKnown RBP27.33■■□□□ 1.97
PDLIM3-203ENST00000284771 SLC10A5Q5PT55 438 aa27.32■■□□□ 1.96
PDLIM3-203ENST00000284771 NRXN2Q9P2S2 1712 aa27.32■■□□□ 1.96
PDLIM3-203ENST00000284771 CNBD1Q8NA66 436 aa27.31■■□□□ 1.96
PDLIM3-203ENST00000284771 GTF2E1P29083 439 aaPredicted RBP27.3■■□□□ 1.96
PDLIM3-203ENST00000284771 RABL6Q3YEC7 729 aaPredicted RBP27.3■■□□□ 1.96
PDLIM3-203ENST00000284771 PNMA6EA0A0J9YXQ4 647 aa27.3■■□□□ 1.96
PDLIM3-203ENST00000284771 C3orf67Q6ZVT6 689 aa27.3■■□□□ 1.96
PDLIM3-203ENST00000284771 MTFR1LQ9H019 292 aa27.3■■□□□ 1.96
PDLIM3-203ENST00000284771 ATF5Q9Y2D1 282 aaPredicted RBP27.3■■□□□ 1.96
PDLIM3-203ENST00000284771 PARP3Q9Y6F1 533 aa27.3■■□□□ 1.96
PDLIM3-203ENST00000284771 PDE8AO60658 829 aa27.29■■□□□ 1.96
PDLIM3-203ENST00000284771 ATP8B2P98198 1209 aa27.29■■□□□ 1.96
PDLIM3-203ENST00000284771 RPAP2Q8IXW5 612 aaPredicted RBP27.29■■□□□ 1.96
PDLIM3-203ENST00000284771 HDAC5Q9UQL6 1122 aa27.29■■□□□ 1.96
PDLIM3-203ENST00000284771 MTX1Q13505 466 aa27.28■■□□□ 1.96
PDLIM3-203ENST00000284771 LMBR1LQ6UX01 489 aa27.28■■□□□ 1.96
PDLIM3-203ENST00000284771 CSF1RP07333 972 aa27.27■■□□□ 1.96
PDLIM3-203ENST00000284771 TTLL11Q8NHH1 800 aa27.27■■□□□ 1.96
PDLIM3-203ENST00000284771 MYH3P11055 1940 aa27.27■■□□□ 1.96
PDLIM3-203ENST00000284771 LAMB2P55268 1798 aa27.27■■□□□ 1.96
PDLIM3-203ENST00000284771 IGHDP01880 384 aa27.27■■□□□ 1.96
PDLIM3-203ENST00000284771 NPHP1O15259 732 aa27.26■■□□□ 1.95
PDLIM3-203ENST00000284771 CTSWP56202 376 aa27.26■■□□□ 1.95
PDLIM3-203ENST00000284771 PPP4R2Q9NY27 417 aa27.26■■□□□ 1.95
PDLIM3-203ENST00000284771 CCDC85AQ96PX6 553 aaPredicted RBP27.25■■□□□ 1.95
PDLIM3-203ENST00000284771 SGIP1Q9BQI5 828 aa27.25■■□□□ 1.95
PDLIM3-203ENST00000284771 TNRC6CQ9HCJ0 1690 aaKnown RBP27.24■■□□□ 1.95
PDLIM3-203ENST00000284771 SRGAP3O43295 1099 aa27.24■■□□□ 1.95
PDLIM3-203ENST00000284771 B4GALNT3Q6L9W6 998 aa27.24■■□□□ 1.95
PDLIM3-203ENST00000284771 SSH3Q8TE77 659 aa27.24■■□□□ 1.95
PDLIM3-203ENST00000284771 ST5P78524 1137 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms