RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 NSFL1CQ9UNZ2 370 aaKnown RBP24.35■■□□□ 1.49
RAB5A-201ENST00000273047 MCM2P49736 904 aa24.35■■□□□ 1.49
RAB5A-201ENST00000273047 AK2P54819 239 aa24.35■■□□□ 1.49
RAB5A-201ENST00000273047 TTLL7Q6ZT98 887 aa24.35■■□□□ 1.49
RAB5A-201ENST00000273047 ZCRB1Q8TBF4 217 aaKnown RBP24.35■■□□□ 1.49
RAB5A-201ENST00000273047 HDAC5Q9UQL6 1122 aa24.35■■□□□ 1.49
RAB5A-201ENST00000273047 CASTP20810 708 aaKnown RBP24.34■■□□□ 1.49
RAB5A-201ENST00000273047 HSP90AA2PQ14568 343 aaPredicted RBP24.34■■□□□ 1.49
RAB5A-201ENST00000273047 SLAIN2Q9P270 581 aa24.34■■□□□ 1.49
RAB5A-201ENST00000273047 ESPNB1AK53 854 aa24.34■■□□□ 1.49
RAB5A-201ENST00000273047 GPT2Q8TD30 523 aa24.34■■□□□ 1.49
RAB5A-201ENST00000273047 LMTK3Q96Q04 1460 aa24.33■■□□□ 1.49
RAB5A-201ENST00000273047 CPDO75976 1380 aa24.33■■□□□ 1.49
RAB5A-201ENST00000273047 NMIQ13287 307 aaPredicted RBP24.33■■□□□ 1.49
RAB5A-201ENST00000273047 ISY1Q9ULR0 285 aaKnown RBP24.33■■□□□ 1.49
RAB5A-201ENST00000273047 WDR17Q8IZU2 1322 aa24.33■■□□□ 1.49
RAB5A-201ENST00000273047 EVI5LQ96CN4 794 aa24.33■■□□□ 1.49
RAB5A-201ENST00000273047 CHMP3Q9Y3E7 222 aa24.33■■□□□ 1.49
RAB5A-201ENST00000273047 ERBB4Q15303 1308 aa24.32■■□□□ 1.48
RAB5A-201ENST00000273047 TFCP2Q12800 502 aa24.32■■□□□ 1.48
RAB5A-201ENST00000273047 AFDNP55196 1824 aaKnown RBP24.32■■□□□ 1.48
RAB5A-201ENST00000273047 RRP9O43818 475 aaKnown RBP24.32■■□□□ 1.48
RAB5A-201ENST00000273047 LARGE1O95461 756 aa24.32■■□□□ 1.48
RAB5A-201ENST00000273047 PTPN12Q05209 780 aaKnown RBP24.32■■□□□ 1.48
RAB5A-201ENST00000273047 RUFY3Q7L099 469 aa24.32■■□□□ 1.48
RAB5A-201ENST00000273047 GDPD2Q9HCC8 539 aa24.32■■□□□ 1.48
RAB5A-201ENST00000273047 PKD1L3Q7Z443 1732 aa24.32■■□□□ 1.48
RAB5A-201ENST00000273047 A0A0D9SFI3 127 aa24.31■■□□□ 1.48
RAB5A-201ENST00000273047 TPRNQ4KMQ1 711 aa24.31■■□□□ 1.48
RAB5A-201ENST00000273047 TTC14Q96N46 770 aa24.31■■□□□ 1.48
RAB5A-201ENST00000273047 ZBTB3Q9H5J0 574 aa24.31■■□□□ 1.48
RAB5A-201ENST00000273047 ZNF330Q9Y3S2 320 aaPredicted RBP24.31■■□□□ 1.48
RAB5A-201ENST00000273047 MRC1P22897 1456 aa24.31■■□□□ 1.48
RAB5A-201ENST00000273047 BRD1O95696 1058 aa24.3■■□□□ 1.48
RAB5A-201ENST00000273047 PTMSP20962 102 aa24.3■■□□□ 1.48
RAB5A-201ENST00000273047 RFX5P48382 616 aaPredicted RBP24.3■■□□□ 1.48
RAB5A-201ENST00000273047 IL17RAQ96F46 866 aa24.3■■□□□ 1.48
RAB5A-201ENST00000273047 JAKMIP1Q96N16 626 aaKnown RBP24.3■■□□□ 1.48
RAB5A-201ENST00000273047 FSD1Q9BTV5 496 aa24.3■■□□□ 1.48
RAB5A-201ENST00000273047 DNAJC5Q9H3Z4 198 aa24.3■■□□□ 1.48
RAB5A-201ENST00000273047 TAF6LQ9Y6J9 622 aa24.3■■□□□ 1.48
RAB5A-201ENST00000273047 DBNLQ9UJU6 430 aaKnown RBP24.29■■□□□ 1.48
RAB5A-201ENST00000273047 LMBR1LQ6UX01 489 aa24.29■■□□□ 1.48
RAB5A-201ENST00000273047 RUFY2Q8WXA3 655 aa24.29■■□□□ 1.48
RAB5A-201ENST00000273047 ARFGEF2Q9Y6D5 1785 aa24.28■■□□□ 1.48
RAB5A-201ENST00000273047 INTS4Q96HW7 963 aaKnown RBP24.28■■□□□ 1.48
RAB5A-201ENST00000273047 TCEANC2Q96MN5 208 aa24.28■■□□□ 1.48
RAB5A-201ENST00000273047 PCDH11XQ9BZA7 1347 aa24.28■■□□□ 1.48
RAB5A-201ENST00000273047 PCDH11YQ9BZA8 1340 aa24.28■■□□□ 1.48
RAB5A-201ENST00000273047 KCNJ4P48050 445 aa24.27■■□□□ 1.48
RAB5A-201ENST00000273047 ZSCAN23Q3MJ62 389 aa24.27■■□□□ 1.48
RAB5A-201ENST00000273047 PLBD2Q8NHP8 589 aa24.27■■□□□ 1.48
RAB5A-201ENST00000273047 RBM8AQ9Y5S9 174 aaKnown RBP24.27■■□□□ 1.48
RAB5A-201ENST00000273047 GLI3P10071 1580 aa24.27■■□□□ 1.48
RAB5A-201ENST00000273047 ZNF589Q86UQ0 364 aaPredicted RBP24.27■■□□□ 1.48
RAB5A-201ENST00000273047 PKNOX2Q96KN3 472 aa24.27■■□□□ 1.48
RAB5A-201ENST00000273047 CCDC171Q6TFL3 1326 aa24.27■■□□□ 1.48
RAB5A-201ENST00000273047 KAT6BQ8WYB5 2073 aa24.26■■□□□ 1.47
RAB5A-201ENST00000273047 EVA1CP58658 441 aa24.26■■□□□ 1.47
RAB5A-201ENST00000273047 COL5A2P05997 1499 aaPredicted RBP24.26■■□□□ 1.47
RAB5A-201ENST00000273047 CASP7P55210 303 aa24.26■■□□□ 1.47
RAB5A-201ENST00000273047 VSIG10Q8N0Z9 540 aa24.26■■□□□ 1.47
RAB5A-201ENST00000273047 TCHHQ07283 1943 aa24.26■■□□□ 1.47
RAB5A-201ENST00000273047 SOS2Q07890 1332 aaPredicted RBP24.26■■□□□ 1.47
RAB5A-201ENST00000273047 IL2RBP14784 551 aa24.25■■□□□ 1.47
RAB5A-201ENST00000273047 NECTIN1Q15223 517 aa24.25■■□□□ 1.47
RAB5A-201ENST00000273047 TNNI3KQ59H18 835 aa24.25■■□□□ 1.47
RAB5A-201ENST00000273047 DBNDD2Q9BQY9 259 aa24.25■■□□□ 1.47
RAB5A-201ENST00000273047 COPRSQ9NQ92 184 aa24.25■■□□□ 1.47
RAB5A-201ENST00000273047 FPGT-TNNI3KV9GXZ4 949 aa24.25■■□□□ 1.47
RAB5A-201ENST00000273047 EPB41L2O43491 1005 aaKnown RBP24.25■■□□□ 1.47
RAB5A-201ENST00000273047 DNAJC2Q99543 621 aaKnown RBP24.25■■□□□ 1.47
RAB5A-201ENST00000273047 SLFNL1Q499Z3 407 aa24.24■■□□□ 1.47
RAB5A-201ENST00000273047 CCDC83Q8IWF9 413 aa24.24■■□□□ 1.47
RAB5A-201ENST00000273047 TRIM44Q96DX7 344 aaPredicted RBP24.24■■□□□ 1.47
RAB5A-201ENST00000273047 ZNF594Q96JF6 807 aaPredicted RBP24.24■■□□□ 1.47
RAB5A-201ENST00000273047 TMEM63CQ9P1W3 806 aa24.24■■□□□ 1.47
RAB5A-201ENST00000273047 LIMCH1Q9UPQ0 1083 aa24.24■■□□□ 1.47
RAB5A-201ENST00000273047 CREB3L3Q68CJ9 461 aa24.23■■□□□ 1.47
RAB5A-201ENST00000273047 PDRG1Q9NUG6 133 aa24.23■■□□□ 1.47
RAB5A-201ENST00000273047 RABL6Q3YEC7 729 aaPredicted RBP24.23■■□□□ 1.47
RAB5A-201ENST00000273047 RPAP1Q9BWH6 1393 aaPredicted RBP24.23■■□□□ 1.47
RAB5A-201ENST00000273047 FOXO4P98177 505 aa24.22■■□□□ 1.47
RAB5A-201ENST00000273047 NECAB1Q8N987 351 aa24.22■■□□□ 1.47
RAB5A-201ENST00000273047 SEC62Q99442 399 aaKnown RBP24.22■■□□□ 1.47
RAB5A-201ENST00000273047 CCDC129Q6ZRS4 1044 aa24.22■■□□□ 1.47
RAB5A-201ENST00000273047 STRCQ7RTU9 1775 aa24.21■■□□□ 1.47
RAB5A-201ENST00000273047 GADD45BO75293 160 aaPredicted RBP24.21■■□□□ 1.47
RAB5A-201ENST00000273047 MAP4K1Q92918 833 aa24.21■■□□□ 1.47
RAB5A-201ENST00000273047 CCDC85AQ96PX6 553 aaPredicted RBP24.21■■□□□ 1.47
RAB5A-201ENST00000273047 PRIM1P49642 420 aaKnown RBP24.21■■□□□ 1.47
RAB5A-201ENST00000273047 DDX46Q7L014 1031 aaKnown RBP24.21■■□□□ 1.47
RAB5A-201ENST00000273047 SLC27A2O14975 620 aa24.2■■□□□ 1.46
RAB5A-201ENST00000273047 TIMM10P62072 90 aa24.2■■□□□ 1.46
RAB5A-201ENST00000273047 NEUROD6Q96NK8 337 aa24.2■■□□□ 1.46
RAB5A-201ENST00000273047 ZMYND15Q9H091 742 aa24.2■■□□□ 1.46
RAB5A-201ENST00000273047 ABCC6O95255 1503 aa24.2■■□□□ 1.46
RAB5A-201ENST00000273047 CARD10Q9BWT7 1032 aa24.2■■□□□ 1.46
RAB5A-201ENST00000273047 CYP46A1Q9Y6A2 500 aa24.2■■□□□ 1.46
RAB5A-201ENST00000273047 SYCE3A1L190 88 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms