RNA–Protein interactions for RNA: ENST00000272139.4

C1orf35-201, Transcript of chromosome 1 open reading frame 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf35, Length 1,427 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf35-201ENST00000272139 YBX3P16989 372 aaKnown RBP eCLIP29.02■■■□□ 2.24
C1orf35-201ENST00000272139 PPP1R42Q7Z4L9 355 aa29.02■■■□□ 2.24
C1orf35-201ENST00000272139 NLRP10Q86W26 655 aa29.02■■■□□ 2.24
C1orf35-201ENST00000272139 NBPF5PQ86XG9 351 aaPredicted RBP29.02■■■□□ 2.24
C1orf35-201ENST00000272139 LINS1Q8NG48 757 aa29.02■■■□□ 2.24
C1orf35-201ENST00000272139 TPTE2Q6XPS3 522 aa29.01■■■□□ 2.23
C1orf35-201ENST00000272139 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.01■■■□□ 2.23
C1orf35-201ENST00000272139 CCDC191Q8NCU4 936 aa29.01■■■□□ 2.23
C1orf35-201ENST00000272139 IGKV5-2P06315 115 aa29■■■□□ 2.23
C1orf35-201ENST00000272139 TRIM27P14373 513 aa29■■■□□ 2.23
C1orf35-201ENST00000272139 BEND3Q5T5X7 828 aa29■■■□□ 2.23
C1orf35-201ENST00000272139 SUSD4Q5VX71 490 aa29■■■□□ 2.23
C1orf35-201ENST00000272139 NYXQ9GZU5 481 aa29■■■□□ 2.23
C1orf35-201ENST00000272139 GTF2E1P29083 439 aaPredicted RBP28.99■■■□□ 2.23
C1orf35-201ENST00000272139 CWF19L2Q2TBE0 894 aaKnown RBP28.99■■■□□ 2.23
C1orf35-201ENST00000272139 CWC25Q9NXE8 425 aaPredicted RBP28.99■■■□□ 2.23
C1orf35-201ENST00000272139 NEURL1BA8MQ27 555 aa28.98■■■□□ 2.23
C1orf35-201ENST00000272139 CLUAP1Q96AJ1 413 aa28.98■■■□□ 2.23
C1orf35-201ENST00000272139 UTP14AQ9BVJ6 771 aaKnown RBP28.98■■■□□ 2.23
C1orf35-201ENST00000272139 SRCIN1Q9C0H9 1055 aa28.98■■■□□ 2.23
C1orf35-201ENST00000272139 PXDNLA1KZ92 1463 aa28.98■■■□□ 2.23
C1orf35-201ENST00000272139 CNBD1Q8NA66 436 aa28.97■■■□□ 2.23
C1orf35-201ENST00000272139 TRMT112Q9UI30 125 aaKnown RBP28.97■■■□□ 2.23
C1orf35-201ENST00000272139 NRXN2Q9P2S2 1712 aa28.96■■■□□ 2.23
C1orf35-201ENST00000272139 PLIN1O60240 522 aa28.95■■■□□ 2.23
C1orf35-201ENST00000272139 ALDH1L1O75891 902 aa28.95■■■□□ 2.23
C1orf35-201ENST00000272139 MS4A1P11836 297 aa28.95■■■□□ 2.23
C1orf35-201ENST00000272139 CCT4P50991 539 aaKnown RBP28.95■■■□□ 2.23
C1orf35-201ENST00000272139 FTSJ3Q8IY81 847 aaKnown RBP28.95■■■□□ 2.23
C1orf35-201ENST00000272139 NTSR2O95665 410 aa28.94■■■□□ 2.22
C1orf35-201ENST00000272139 PRR5LQ6MZQ0 368 aa28.94■■■□□ 2.22
C1orf35-201ENST00000272139 DZIP1LQ8IYY4 767 aaKnown RBP28.94■■■□□ 2.22
C1orf35-201ENST00000272139 TNNQ9UQP3 1299 aa28.94■■■□□ 2.22
C1orf35-201ENST00000272139 KIAA1551Q9HCM1 1747 aa28.94■■■□□ 2.22
C1orf35-201ENST00000272139 IBTKQ9P2D0 1353 aaPredicted RBP28.94■■■□□ 2.22
C1orf35-201ENST00000272139 ABCC4O15439 1325 aa28.94■■■□□ 2.22
C1orf35-201ENST00000272139 ST5P78524 1137 aa28.94■■■□□ 2.22
C1orf35-201ENST00000272139 GCKRQ14397 625 aa28.94■■■□□ 2.22
C1orf35-201ENST00000272139 RNF123Q5XPI4 1314 aa28.93■■■□□ 2.22
C1orf35-201ENST00000272139 NUTM1Q86Y26 1132 aa28.93■■■□□ 2.22
C1orf35-201ENST00000272139 N4BP2Q86UW6 1770 aaPredicted RBP28.92■■■□□ 2.22
C1orf35-201ENST00000272139 ZBTB38Q8NAP3 1195 aaPredicted RBP28.92■■■□□ 2.22
C1orf35-201ENST00000272139 SH3TC1Q8TE82 1336 aa28.91■■■□□ 2.22
C1orf35-201ENST00000272139 ERFEQ4G0M1 354 aa28.91■■■□□ 2.22
C1orf35-201ENST00000272139 RTL5Q5HYW3 569 aaPredicted RBP28.91■■■□□ 2.22
C1orf35-201ENST00000272139 INTS3Q68E01 1043 aaKnown RBP28.91■■■□□ 2.22
C1orf35-201ENST00000272139 CCDC24Q8N4L8 307 aa28.91■■■□□ 2.22
C1orf35-201ENST00000272139 FAM89AQ96GI7 184 aa28.91■■■□□ 2.22
C1orf35-201ENST00000272139 A0A0G2JLW4 131 aa28.9■■■□□ 2.22
C1orf35-201ENST00000272139 PCCAP05165 728 aaPredicted RBP28.9■■■□□ 2.22
C1orf35-201ENST00000272139 C9orf78Q9NZ63 289 aaPredicted RBP28.9■■■□□ 2.22
C1orf35-201ENST00000272139 CENPBP07199 599 aaPredicted RBP28.88■■■□□ 2.21
C1orf35-201ENST00000272139 DPEP1P16444 411 aa28.88■■■□□ 2.21
C1orf35-201ENST00000272139 WWC3Q9ULE0 1092 aa28.88■■■□□ 2.21
C1orf35-201ENST00000272139 H7C1W4 665 aa28.87■■■□□ 2.21
C1orf35-201ENST00000272139 RRP1P56182 461 aaKnown RBP28.87■■■□□ 2.21
C1orf35-201ENST00000272139 SYNE4Q8N205 404 aa28.87■■■□□ 2.21
C1orf35-201ENST00000272139 TMEM57Q8N5G2 664 aa28.87■■■□□ 2.21
C1orf35-201ENST00000272139 JARID2Q92833 1246 aaPredicted RBP28.87■■■□□ 2.21
C1orf35-201ENST00000272139 RLBP1P12271 317 aa28.86■■■□□ 2.21
C1orf35-201ENST00000272139 UBE3BQ7Z3V4 1068 aa28.86■■■□□ 2.21
C1orf35-201ENST00000272139 PANK1Q8TE04 598 aa28.86■■■□□ 2.21
C1orf35-201ENST00000272139 BRIP1Q9BX63 1249 aa28.86■■■□□ 2.21
C1orf35-201ENST00000272139 SUPT16HQ9Y5B9 1047 aaKnown RBP28.86■■■□□ 2.21
C1orf35-201ENST00000272139 GRM8O00222 908 aa28.86■■■□□ 2.21
C1orf35-201ENST00000272139 HSP90B1P14625 803 aaKnown RBP28.86■■■□□ 2.21
C1orf35-201ENST00000272139 PDE3AQ14432 1141 aa28.86■■■□□ 2.21
C1orf35-201ENST00000272139 SLC10A5Q5PT55 438 aa28.86■■■□□ 2.21
C1orf35-201ENST00000272139 IRS4O14654 1257 aaPredicted RBP28.85■■■□□ 2.21
C1orf35-201ENST00000272139 ZNF784Q8NCA9 323 aaPredicted RBP28.85■■■□□ 2.21
C1orf35-201ENST00000272139 ANKRD31Q8N7Z5 1873 aa28.85■■■□□ 2.21
C1orf35-201ENST00000272139 HCLS1P14317 486 aaPredicted RBP28.84■■■□□ 2.21
C1orf35-201ENST00000272139 PDE6BP35913 854 aa28.84■■■□□ 2.21
C1orf35-201ENST00000272139 PIM2Q9P1W9 311 aa28.84■■■□□ 2.21
C1orf35-201ENST00000272139 BCS1LQ9Y276 419 aa28.84■■■□□ 2.21
C1orf35-201ENST00000272139 CDHR2Q9BYE9 1310 aa28.83■■■□□ 2.21
C1orf35-201ENST00000272139 ABCC12Q96J65 1359 aa28.83■■■□□ 2.21
C1orf35-201ENST00000272139 ITPRIPQ8IWB1 547 aa28.83■■■□□ 2.21
C1orf35-201ENST00000272139 NLRP3Q96P20 1036 aa28.83■■■□□ 2.21
C1orf35-201ENST00000272139 USP44Q9H0E7 712 aa28.83■■■□□ 2.21
C1orf35-201ENST00000272139 BRCA1P38398 1863 aaKnown RBP28.83■■■□□ 2.21
C1orf35-201ENST00000272139 KCNA3P22001 575 aa28.82■■■□□ 2.2
C1orf35-201ENST00000272139 DDX60Q8IY21 1712 aaKnown RBP28.81■■■□□ 2.2
C1orf35-201ENST00000272139 MYH3P11055 1940 aa28.81■■■□□ 2.2
C1orf35-201ENST00000272139 NBPF7P0C2Y1 421 aaPredicted RBP28.8■■■□□ 2.2
C1orf35-201ENST00000272139 CASP7P55210 303 aa28.8■■■□□ 2.2
C1orf35-201ENST00000272139 C20orf194Q5TEA3 1177 aa28.8■■■□□ 2.2
C1orf35-201ENST00000272139 UTYO14607 1347 aa28.8■■■□□ 2.2
C1orf35-201ENST00000272139 LAMB2P55268 1798 aa28.79■■■□□ 2.2
C1orf35-201ENST00000272139 PDE8AO60658 829 aa28.79■■■□□ 2.2
C1orf35-201ENST00000272139 PDZRN3Q9UPQ7 1066 aa28.79■■■□□ 2.2
C1orf35-201ENST00000272139 RIC1Q4ADV7 1423 aa28.79■■■□□ 2.2
C1orf35-201ENST00000272139 H0YIN7 160 aa28.78■■■□□ 2.2
C1orf35-201ENST00000272139 DALRD3Q5D0E6 543 aaKnown RBP28.78■■■□□ 2.2
C1orf35-201ENST00000272139 COG6Q9Y2V7 657 aa28.78■■■□□ 2.2
C1orf35-201ENST00000272139 GNAI3P08754 354 aa28.77■■■□□ 2.2
C1orf35-201ENST00000272139 UBTFL1P0CB47 393 aaPredicted RBP28.77■■■□□ 2.2
C1orf35-201ENST00000272139 CHRNA5P30532 468 aa28.77■■■□□ 2.2
C1orf35-201ENST00000272139 MVPQ14764 893 aaKnown RBP28.77■■■□□ 2.2
C1orf35-201ENST00000272139 HDAC5Q9UQL6 1122 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms