RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ZNF692Q9BU19 519 aaPredicted RBP19.28■□□□□ 0.68
TSPAN3-201ENST00000267970 METAP2P50579 478 aaKnown RBP eCLIP19.28■□□□□ 0.68
TSPAN3-201ENST00000267970 TTLL12Q14166 644 aaPredicted RBP19.28■□□□□ 0.68
TSPAN3-201ENST00000267970 NOLC1Q14978 699 aaKnown RBP eCLIP19.28■□□□□ 0.684e-6■□□□□ 8.2
TSPAN3-201ENST00000267970 DPH6Q7L8W6 267 aa19.28■□□□□ 0.68
TSPAN3-201ENST00000267970 CEP57Q86XR8 500 aa19.28■□□□□ 0.68
TSPAN3-201ENST00000267970 RABEP2Q9H5N1 569 aa19.28■□□□□ 0.68
TSPAN3-201ENST00000267970 A0A087WZG4 1122 aa19.28■□□□□ 0.68
TSPAN3-201ENST00000267970 DTNBO60941 627 aa19.28■□□□□ 0.68
TSPAN3-201ENST00000267970 SKILP12757 684 aa19.28■□□□□ 0.68
TSPAN3-201ENST00000267970 DDX23Q9BUQ8 820 aaKnown RBP19.28■□□□□ 0.68
TSPAN3-201ENST00000267970 TRIM21P19474 475 aaKnown RBP19.28■□□□□ 0.68
TSPAN3-201ENST00000267970 NUDT16Q96DE0 195 aaKnown RBP19.28■□□□□ 0.68
TSPAN3-201ENST00000267970 SCAPERQ9BY12 1400 aa19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 IARSP41252 1262 aaKnown RBP19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 SF3A3Q12874 501 aaKnown RBP eCLIP19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 SF3B2Q13435 895 aaKnown RBP19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 DDX46Q7L014 1031 aaKnown RBP19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 UBE2Q2Q8WVN8 375 aa19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 PPM1EQ8WY54 764 aa19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 CUL5Q93034 780 aa19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 STARD3NLO95772 234 aa19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 TMCO4Q5TGY1 634 aa19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 C16orf71Q8IYS4 520 aaPredicted RBP19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 NAA15Q9BXJ9 866 aaKnown RBP19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 TMOD2Q9NZR1 351 aa19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 CTAGE5O15320 804 aa19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 GSDMDP57764 484 aa19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 CCDC150Q8NCX0 1101 aa19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 CALML4Q96GE6 196 aa19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 SBNO2Q9Y2G9 1366 aa19.27■□□□□ 0.68
TSPAN3-201ENST00000267970 RHOXF2BP0C7M4 288 aa19.27■□□□□ 0.67
TSPAN3-201ENST00000267970 RHOXF2Q9BQY4 288 aa19.27■□□□□ 0.67
TSPAN3-201ENST00000267970 TMX3Q96JJ7 454 aa19.26■□□□□ 0.67
TSPAN3-201ENST00000267970 TMOD3Q9NYL9 352 aa19.26■□□□□ 0.67
TSPAN3-201ENST00000267970 VPS18Q9P253 973 aa19.26■□□□□ 0.67
TSPAN3-201ENST00000267970 AQRO60306 1485 aaKnown RBP eCLIP19.26■□□□□ 0.67
TSPAN3-201ENST00000267970 KRT13P13646 458 aa19.26■□□□□ 0.67
TSPAN3-201ENST00000267970 ZNF354CQ86Y25 554 aa19.26■□□□□ 0.67
TSPAN3-201ENST00000267970 XRCC6P12956 609 aaKnown RBP eCLIP19.26■□□□□ 0.67
TSPAN3-201ENST00000267970 IGF1RP08069 1367 aa19.26■□□□□ 0.67
TSPAN3-201ENST00000267970 CCDC6Q16204 474 aa19.26■□□□□ 0.67
TSPAN3-201ENST00000267970 NEK1Q96PY6 1258 aa19.26■□□□□ 0.67
TSPAN3-201ENST00000267970 PLIN2Q99541 437 aa19.26■□□□□ 0.67
TSPAN3-201ENST00000267970 TAOK3Q9H2K8 898 aa19.26■□□□□ 0.67
TSPAN3-201ENST00000267970 CCDC196A0A1B0GTZ2 297 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 FGFR1OPO95684 399 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 BICD1Q96G01 975 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 WWC3Q9ULE0 1092 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 TSPY2A6NKD2 308 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 ZEB2O60315 1214 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 LRSAM1Q6UWE0 723 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 GIGYF2Q6Y7W6 1299 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 SPATA24Q86W54 205 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 GAPVD1Q14C86 1478 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 ZPR1O75312 459 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 SPECC1LQ69YQ0 1117 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 GPIHBP1Q8IV16 184 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 STX17P56962 302 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 UBE2HP62256 183 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 FGD5Q6ZNL6 1462 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 AKR1B10O60218 316 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 OSCARQ8IYS5 282 aa19.25■□□□□ 0.67
TSPAN3-201ENST00000267970 DYNC1I1O14576 645 aa19.24■□□□□ 0.67
TSPAN3-201ENST00000267970 SLC5A1P13866 664 aa19.24■□□□□ 0.67
TSPAN3-201ENST00000267970 SYKP43405 635 aa19.24■□□□□ 0.67
TSPAN3-201ENST00000267970 DNM1Q05193 864 aaKnown RBP19.24■□□□□ 0.67
TSPAN3-201ENST00000267970 NKTRP30414 1462 aaKnown RBP19.24■□□□□ 0.67
TSPAN3-201ENST00000267970 KRT222Q8N1A0 295 aa19.24■□□□□ 0.67
TSPAN3-201ENST00000267970 BRF1Q92994 677 aa19.24■□□□□ 0.67
TSPAN3-201ENST00000267970 LZTFL1Q9NQ48 299 aa19.24■□□□□ 0.67
TSPAN3-201ENST00000267970 TCP11L1Q9NUJ3 509 aa19.24■□□□□ 0.67
TSPAN3-201ENST00000267970 KIAA0753Q2KHM9 967 aa19.24■□□□□ 0.67
TSPAN3-201ENST00000267970 KIF20AO95235 890 aa19.23■□□□□ 0.67
TSPAN3-201ENST00000267970 EXOC1Q9NV70 894 aa19.23■□□□□ 0.67
TSPAN3-201ENST00000267970 WDR70Q9NW82 654 aa19.23■□□□□ 0.67
TSPAN3-201ENST00000267970 ADAMTS2O95450 1211 aa19.23■□□□□ 0.67
TSPAN3-201ENST00000267970 UBA7P41226 1012 aa19.23■□□□□ 0.67
TSPAN3-201ENST00000267970 CA8P35219 290 aa19.23■□□□□ 0.67
TSPAN3-201ENST00000267970 PRIM1P49642 420 aaKnown RBP19.23■□□□□ 0.67
TSPAN3-201ENST00000267970 PAXIP1Q6ZW49 1069 aaPredicted RBP19.23■□□□□ 0.67
TSPAN3-201ENST00000267970 CCDC102BQ68D86 513 aa19.23■□□□□ 0.67
TSPAN3-201ENST00000267970 IFT81Q8WYA0 676 aa19.23■□□□□ 0.67
TSPAN3-201ENST00000267970 GTF3C6Q969F1 213 aa19.23■□□□□ 0.67
TSPAN3-201ENST00000267970 LMOD1P29536 600 aaPredicted RBP19.23■□□□□ 0.67
TSPAN3-201ENST00000267970 KIAA1107Q9UPP5 1409 aa19.23■□□□□ 0.67
TSPAN3-201ENST00000267970 KLF18A0A0U1RQI7 1052 aa19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 CCDC63Q8NA47 563 aa19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 F8W031 263 aaPredicted RBP19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 PPP1R42Q7Z4L9 355 aa19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 RAB34Q9BZG1 259 aa19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 PHAXQ9H814 394 aaKnown RBP19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 IKBKGQ9Y6K9 419 aa19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 HGSO14964 777 aaPredicted RBP19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 RAPGEF3O95398 923 aa19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 HSPA4P34932 840 aa19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 IRX3P78415 501 aaPredicted RBP19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 C10orf67Q8IYJ2 551 aa19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 MSL1Q68DK7 614 aa19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 EVI5LQ96CN4 794 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms