RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SSFA2P28290 1259 aa18■□□□□ 0.47
TIMP3-201ENST00000266085 ODF2Q5BJF6 829 aa18■□□□□ 0.47
TIMP3-201ENST00000266085 PPFIBP1Q86W92 1011 aa18■□□□□ 0.47
TIMP3-201ENST00000266085 TNNT3P45378 269 aaPredicted RBP18■□□□□ 0.47
TIMP3-201ENST00000266085 NEK1Q96PY6 1258 aa18■□□□□ 0.47
TIMP3-201ENST00000266085 HMG20BQ9P0W2 317 aa17.99■□□□□ 0.47
TIMP3-201ENST00000266085 SMC5Q8IY18 1101 aa17.99■□□□□ 0.47
TIMP3-201ENST00000266085 TNPO1Q92973 898 aaKnown RBP17.99■□□□□ 0.47
TIMP3-201ENST00000266085 UTP14AQ9BVJ6 771 aaKnown RBP17.99■□□□□ 0.47
TIMP3-201ENST00000266085 GOLGA8AA7E2F4 631 aa17.98■□□□□ 0.47
TIMP3-201ENST00000266085 SOS1Q07889 1333 aaPredicted RBP17.98■□□□□ 0.47
TIMP3-201ENST00000266085 ST5P78524 1137 aa17.98■□□□□ 0.47
TIMP3-201ENST00000266085 SEC63Q9UGP8 760 aaKnown RBP17.98■□□□□ 0.47
TIMP3-201ENST00000266085 BAG3O95817 575 aa17.98■□□□□ 0.47
TIMP3-201ENST00000266085 CBFA2T2O43439 604 aa17.97■□□□□ 0.47
TIMP3-201ENST00000266085 SAMD9LQ8IVG5 1584 aa17.97■□□□□ 0.47
TIMP3-201ENST00000266085 IRS4O14654 1257 aaPredicted RBP17.97■□□□□ 0.47
TIMP3-201ENST00000266085 ZNF76P36508 570 aa17.97■□□□□ 0.47
TIMP3-201ENST00000266085 CAGE1Q8TC20 777 aa17.97■□□□□ 0.47
TIMP3-201ENST00000266085 USP16Q9Y5T5 823 aa17.97■□□□□ 0.47
TIMP3-201ENST00000266085 ZFYP08048 801 aaPredicted RBP17.97■□□□□ 0.47
TIMP3-201ENST00000266085 FILIP1Q7Z7B0 1213 aa17.97■□□□□ 0.47
TIMP3-201ENST00000266085 HELBQ8NG08 1087 aaPredicted RBP17.97■□□□□ 0.47
TIMP3-201ENST00000266085 RTCBQ9Y3I0 505 aaKnown RBP17.97■□□□□ 0.47
TIMP3-201ENST00000266085 ZBTB7BO15156 539 aaPredicted RBP17.97■□□□□ 0.47
TIMP3-201ENST00000266085 PPFIA3O75145 1194 aa17.97■□□□□ 0.47
TIMP3-201ENST00000266085 TMEM132AQ24JP5 1023 aa17.97■□□□□ 0.47
TIMP3-201ENST00000266085 ZFYVE27Q5T4F4 411 aa17.97■□□□□ 0.47
TIMP3-201ENST00000266085 IL27Q8NEV9 243 aa17.97■□□□□ 0.47
TIMP3-201ENST00000266085 TCEANC2Q96MN5 208 aa17.97■□□□□ 0.47
TIMP3-201ENST00000266085 RUFY1Q96T51 708 aa17.97■□□□□ 0.47
TIMP3-201ENST00000266085 ESYT1Q9BSJ8 1104 aa17.97■□□□□ 0.47
TIMP3-201ENST00000266085 TMEM67Q5HYA8 995 aa17.96■□□□□ 0.47
TIMP3-201ENST00000266085 TPTE2Q6XPS3 522 aa17.96■□□□□ 0.47
TIMP3-201ENST00000266085 MICU3Q86XE3 530 aa17.96■□□□□ 0.47
TIMP3-201ENST00000266085 ACBD3Q9H3P7 528 aa17.96■□□□□ 0.47
TIMP3-201ENST00000266085 BABAM1Q9NWV8 329 aa17.96■□□□□ 0.47
TIMP3-201ENST00000266085 CAMK4Q16566 473 aa17.96■□□□□ 0.47
TIMP3-201ENST00000266085 SPTY2D1Q68D10 685 aaPredicted RBP17.96■□□□□ 0.47
TIMP3-201ENST00000266085 SBNO2Q9Y2G9 1366 aa17.96■□□□□ 0.47
TIMP3-201ENST00000266085 MFSD6Q6ZSS7 791 aa17.96■□□□□ 0.47
TIMP3-201ENST00000266085 METP08581 1390 aa17.96■□□□□ 0.46
TIMP3-201ENST00000266085 SMTNL1A8MU46 457 aa17.95■□□□□ 0.46
TIMP3-201ENST00000266085 TEX35Q5T0J7 233 aa17.95■□□□□ 0.46
TIMP3-201ENST00000266085 CATIPQ7Z7H3 387 aa17.95■□□□□ 0.46
TIMP3-201ENST00000266085 HSP90B2PQ58FF3 399 aa17.95■□□□□ 0.46
TIMP3-201ENST00000266085 RAB11FIP4Q86YS3 637 aa17.95■□□□□ 0.46
TIMP3-201ENST00000266085 NCOA7Q8NI08 942 aa17.95■□□□□ 0.46
TIMP3-201ENST00000266085 MLH3Q9UHC1 1453 aa17.95■□□□□ 0.46
TIMP3-201ENST00000266085 TSPY2A6NKD2 308 aa17.95■□□□□ 0.46
TIMP3-201ENST00000266085 CCDC96Q2M329 555 aa17.95■□□□□ 0.46
TIMP3-201ENST00000266085 STX6O43752 255 aa17.95■□□□□ 0.46
TIMP3-201ENST00000266085 SLC9C2Q5TAH2 1124 aa17.95■□□□□ 0.46
TIMP3-201ENST00000266085 BRF1Q92994 677 aa17.95■□□□□ 0.46
TIMP3-201ENST00000266085 RBM8AQ9Y5S9 174 aaKnown RBP17.95■□□□□ 0.46
TIMP3-201ENST00000266085 SPATA31E1Q6ZUB1 1445 aa17.94■□□□□ 0.46
TIMP3-201ENST00000266085 SLC4A8Q2Y0W8 1093 aa17.94■□□□□ 0.46
TIMP3-201ENST00000266085 CCDC144CPQ8IYA2 1237 aa17.94■□□□□ 0.46
TIMP3-201ENST00000266085 TANGO6Q9C0B7 1094 aa17.94■□□□□ 0.46
TIMP3-201ENST00000266085 GCC2Q8IWJ2 1684 aa17.94■□□□□ 0.46
TIMP3-201ENST00000266085 CYP7A1P22680 504 aa17.94■□□□□ 0.46
TIMP3-201ENST00000266085 CCDC183Q5T5S1 534 aa17.94■□□□□ 0.46
TIMP3-201ENST00000266085 HOXB7P09629 217 aa17.94■□□□□ 0.46
TIMP3-201ENST00000266085 BICC1Q9H694 974 aaKnown RBP17.94■□□□□ 0.46
TIMP3-201ENST00000266085 TFIP11Q9UBB9 837 aaKnown RBP17.94■□□□□ 0.46
TIMP3-201ENST00000266085 TTC37Q6PGP7 1564 aa17.94■□□□□ 0.46
TIMP3-201ENST00000266085 IARSP41252 1262 aaKnown RBP17.94■□□□□ 0.46
TIMP3-201ENST00000266085 FAM89AQ96GI7 184 aa17.94■□□□□ 0.46
TIMP3-201ENST00000266085 LUC7LQ9NQ29 371 aaKnown RBP17.94■□□□□ 0.46
TIMP3-201ENST00000266085 ORC3Q9UBD5 711 aaPredicted RBP17.94■□□□□ 0.46
TIMP3-201ENST00000266085 ADGBQ8N7X0 1667 aa17.93■□□□□ 0.46
TIMP3-201ENST00000266085 GJB2P29033 226 aa17.93■□□□□ 0.46
TIMP3-201ENST00000266085 SYCP1Q15431 976 aa17.93■□□□□ 0.46
TIMP3-201ENST00000266085 GDPD2Q9HCC8 539 aa17.93■□□□□ 0.46
TIMP3-201ENST00000266085 PDE4BQ07343 736 aa17.93■□□□□ 0.46
TIMP3-201ENST00000266085 A1BGP04217 495 aa17.93■□□□□ 0.46
TIMP3-201ENST00000266085 MCMDC2Q4G0Z9 681 aa17.93■□□□□ 0.46
TIMP3-201ENST00000266085 SSRP1Q08945 709 aaKnown RBP17.92■□□□□ 0.46
TIMP3-201ENST00000266085 CDCA7Q9BWT1 371 aaPredicted RBP17.92■□□□□ 0.46
TIMP3-201ENST00000266085 LRRC2Q9BYS8 371 aa17.92■□□□□ 0.46
TIMP3-201ENST00000266085 SLC52A2Q9HAB3 445 aa17.92■□□□□ 0.46
TIMP3-201ENST00000266085 ARHGEF10O15013 1369 aa17.92■□□□□ 0.46
TIMP3-201ENST00000266085 ESPNB1AK53 854 aa17.92■□□□□ 0.46
TIMP3-201ENST00000266085 ANAPC15P60006 121 aa17.92■□□□□ 0.46
TIMP3-201ENST00000266085 ZNF496Q96IT1 587 aaPredicted RBP17.92■□□□□ 0.46
TIMP3-201ENST00000266085 DEF6Q9H4E7 631 aa17.92■□□□□ 0.46
TIMP3-201ENST00000266085 CRNKL1Q9BZJ0 848 aaKnown RBP17.92■□□□□ 0.46
TIMP3-201ENST00000266085 TFCP2L1Q9NZI6 479 aa17.92■□□□□ 0.46
TIMP3-201ENST00000266085 MCM5P33992 734 aa17.92■□□□□ 0.46
TIMP3-201ENST00000266085 PLEKHM2Q8IWE5 1019 aa17.92■□□□□ 0.46
TIMP3-201ENST00000266085 ANO10Q9NW15 660 aa17.92■□□□□ 0.46
TIMP3-201ENST00000266085 TFCP2Q12800 502 aa17.91■□□□□ 0.46
TIMP3-201ENST00000266085 CFAP100Q494V2 611 aa17.91■□□□□ 0.46
TIMP3-201ENST00000266085 TMX3Q96JJ7 454 aa17.91■□□□□ 0.46
TIMP3-201ENST00000266085 PAG1Q9NWQ8 432 aa17.91■□□□□ 0.46
TIMP3-201ENST00000266085 TTC41PQ6P2S7 1318 aa17.91■□□□□ 0.46
TIMP3-201ENST00000266085 KDM6BO15054 1643 aa17.91■□□□□ 0.46
TIMP3-201ENST00000266085 PRIM1P49642 420 aaKnown RBP17.91■□□□□ 0.46
TIMP3-201ENST00000266085 NYXQ9GZU5 481 aa17.91■□□□□ 0.46
TIMP3-201ENST00000266085 STX8Q9UNK0 236 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms