RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.09■□□□□ 0.33
AFF4-201ENST00000265343 ATP2A2P16615 1042 aaKnown RBP17.09■□□□□ 0.33
AFF4-201ENST00000265343 CALML4Q96GE6 196 aa17.09■□□□□ 0.33
AFF4-201ENST00000265343 TCP11L1Q9NUJ3 509 aa17.09■□□□□ 0.33
AFF4-201ENST00000265343 KDM4AO75164 1064 aa17.09■□□□□ 0.33
AFF4-201ENST00000265343 PRPF4BQ13523 1007 aaKnown RBP17.09■□□□□ 0.33
AFF4-201ENST00000265343 KIAA1107Q9UPP5 1409 aa17.09■□□□□ 0.33
AFF4-201ENST00000265343 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.33
AFF4-201ENST00000265343 RNF41Q9H4P4 317 aaPredicted RBP17.08■□□□□ 0.33
AFF4-201ENST00000265343 BUB1BO60566 1050 aaPredicted RBP17.08■□□□□ 0.33
AFF4-201ENST00000265343 SSFA2P28290 1259 aa17.08■□□□□ 0.33
AFF4-201ENST00000265343 USP37Q86T82 979 aa17.08■□□□□ 0.33
AFF4-201ENST00000265343 AIDAQ96BJ3 306 aa17.08■□□□□ 0.33
AFF4-201ENST00000265343 SYTL4Q96C24 671 aaPredicted RBP17.08■□□□□ 0.33
AFF4-201ENST00000265343 SUDS3Q9H7L9 328 aaPredicted RBP17.08■□□□□ 0.33
AFF4-201ENST00000265343 PABPN1LA6NDY0 278 aaKnown RBP17.08■□□□□ 0.32
AFF4-201ENST00000265343 CROCCP2Q86T23 111 aa17.08■□□□□ 0.32
AFF4-201ENST00000265343 FKBP4Q02790 459 aaKnown RBP eCLIP17.08■□□□□ 0.32
AFF4-201ENST00000265343 MPHOSPH8Q99549 860 aa17.08■□□□□ 0.32
AFF4-201ENST00000265343 ERCC6LQ2NKX8 1250 aa17.08■□□□□ 0.32
AFF4-201ENST00000265343 SPATS2Q86XZ4 545 aaKnown RBP17.08■□□□□ 0.32
AFF4-201ENST00000265343 CCDC174Q6PII3 467 aa17.08■□□□□ 0.32
AFF4-201ENST00000265343 KIAA1524Q8TCG1 905 aa17.08■□□□□ 0.32
AFF4-201ENST00000265343 MYCBPQ99417 103 aaPredicted RBP17.07■□□□□ 0.32
AFF4-201ENST00000265343 WHAMMP3Q1A5X7 153 aa17.07■□□□□ 0.32
AFF4-201ENST00000265343 ARHGAP24Q8N264 748 aa17.07■□□□□ 0.32
AFF4-201ENST00000265343 AFAP1L1Q8TED9 768 aa17.07■□□□□ 0.32
AFF4-201ENST00000265343 EHMT1Q9H9B1 1298 aa17.07■□□□□ 0.32
AFF4-201ENST00000265343 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
AFF4-201ENST00000265343 CASQ2O14958 399 aaPredicted RBP17.07■□□□□ 0.32
AFF4-201ENST00000265343 PIBF1Q8WXW3 757 aa17.07■□□□□ 0.32
AFF4-201ENST00000265343 CLNS1AP54105 237 aaKnown RBP17.07■□□□□ 0.32
AFF4-201ENST00000265343 SSRP1Q08945 709 aaKnown RBP17.07■□□□□ 0.32
AFF4-201ENST00000265343 FAM114A2Q9NRY5 505 aa17.07■□□□□ 0.32
AFF4-201ENST00000265343 NUTM2FA1L443 756 aa17.06■□□□□ 0.32
AFF4-201ENST00000265343 RABGAP1Q9Y3P9 1069 aa17.06■□□□□ 0.32
AFF4-201ENST00000265343 XRCC6P12956 609 aaKnown RBP eCLIP17.06■□□□□ 0.32
AFF4-201ENST00000265343 KRBA2Q6ZNG9 492 aa17.06■□□□□ 0.32
AFF4-201ENST00000265343 FAM135AQ9P2D6 1515 aa17.06■□□□□ 0.32
AFF4-201ENST00000265343 MAP2K2P36507 400 aa17.06■□□□□ 0.32
AFF4-201ENST00000265343 SEPT14Q6ZU15 432 aa17.06■□□□□ 0.32
AFF4-201ENST00000265343 PCK1P35558 622 aa17.06■□□□□ 0.32
AFF4-201ENST00000265343 MTRF1LQ9UGC7 380 aaKnown RBP17.06■□□□□ 0.32
AFF4-201ENST00000265343 PTPN23Q9H3S7 1636 aa17.06■□□□□ 0.32
AFF4-201ENST00000265343 SLC12A7Q9Y666 1083 aa17.06■□□□□ 0.32
AFF4-201ENST00000265343 CCDC14Q49A88 953 aa17.06■□□□□ 0.32
AFF4-201ENST00000265343 DNAI1Q9UI46 699 aa17.06■□□□□ 0.32
AFF4-201ENST00000265343 SSX2IPQ9Y2D8 614 aa17.06■□□□□ 0.32
AFF4-201ENST00000265343 HCLS1P14317 486 aaPredicted RBP17.05■□□□□ 0.32
AFF4-201ENST00000265343 KIF5AQ12840 1032 aa17.05■□□□□ 0.32
AFF4-201ENST00000265343 ZNF365Q70YC5 407 aa17.05■□□□□ 0.32
AFF4-201ENST00000265343 SYT1P21579 422 aa17.05■□□□□ 0.32
AFF4-201ENST00000265343 ATP2B2Q01814 1243 aa17.05■□□□□ 0.32
AFF4-201ENST00000265343 INPP5BP32019 993 aa17.05■□□□□ 0.32
AFF4-201ENST00000265343 FERMT2Q96AC1 680 aa17.05■□□□□ 0.32
AFF4-201ENST00000265343 STMN1P16949 149 aa17.05■□□□□ 0.32
AFF4-201ENST00000265343 AKR1B10O60218 316 aa17.05■□□□□ 0.32
AFF4-201ENST00000265343 GIGYF1O75420 1035 aaPredicted RBP17.05■□□□□ 0.32
AFF4-201ENST00000265343 ERO1AQ96HE7 468 aa17.05■□□□□ 0.32
AFF4-201ENST00000265343 ITSN2Q9NZM3 1697 aa17.04■□□□□ 0.32
AFF4-201ENST00000265343 GMNNO75496 209 aa17.04■□□□□ 0.32
AFF4-201ENST00000265343 LUC7L3O95232 432 aaKnown RBP17.04■□□□□ 0.32
AFF4-201ENST00000265343 SLFN5Q08AF3 891 aa17.04■□□□□ 0.32
AFF4-201ENST00000265343 SF3B2Q13435 895 aaKnown RBP17.04■□□□□ 0.32
AFF4-201ENST00000265343 RPUSD2Q8IZ73 545 aaKnown RBP17.04■□□□□ 0.32
AFF4-201ENST00000265343 COMMD10Q9Y6G5 202 aa17.04■□□□□ 0.32
AFF4-201ENST00000265343 N4BP3O15049 544 aa17.04■□□□□ 0.32
AFF4-201ENST00000265343 MAP7Q14244 749 aa17.04■□□□□ 0.32
AFF4-201ENST00000265343 CLUL1Q15846 466 aa17.04■□□□□ 0.32
AFF4-201ENST00000265343 FERMT3Q86UX7 667 aa17.04■□□□□ 0.32
AFF4-201ENST00000265343 IQCA1Q86XH1 822 aa17.04■□□□□ 0.32
AFF4-201ENST00000265343 INTS8Q75QN2 995 aaKnown RBP17.04■□□□□ 0.32
AFF4-201ENST00000265343 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.04■□□□□ 0.32
AFF4-201ENST00000265343 CEP126Q9P2H0 1117 aa17.04■□□□□ 0.32
AFF4-201ENST00000265343 FCHSD2O94868 740 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 RASSF2P50749 326 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 GBP7Q8N8V2 638 aaPredicted RBP17.03■□□□□ 0.32
AFF4-201ENST00000265343 TSR2Q969E8 191 aaKnown RBP17.03■□□□□ 0.32
AFF4-201ENST00000265343 ZEB2O60315 1214 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 CFAP58Q5T655 872 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 IRX4P78413 519 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 ANO6Q4KMQ2 910 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 PTPRCP08575 1304 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 DNA2P51530 1060 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 EXOC1Q9NV70 894 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 GOLGA8BA8MQT2 603 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 HDAC9Q9UKV0 1011 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 CCDC194A0A1B0GVG4 234 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 TNNC1P63316 161 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 CCDC40Q4G0X9 1142 aa17.03■□□□□ 0.32
AFF4-201ENST00000265343 PRC1O43663 620 aa17.02■□□□□ 0.32
AFF4-201ENST00000265343 SYKP43405 635 aa17.02■□□□□ 0.32
AFF4-201ENST00000265343 CATIPQ7Z7H3 387 aa17.02■□□□□ 0.32
AFF4-201ENST00000265343 FYB2Q5VWT5 728 aa17.02■□□□□ 0.32
AFF4-201ENST00000265343 SNX21Q969T3 373 aa17.02■□□□□ 0.32
AFF4-201ENST00000265343 ZSCAN22P10073 491 aaPredicted RBP17.02■□□□□ 0.32
AFF4-201ENST00000265343 GJB2P29033 226 aa17.02■□□□□ 0.31
AFF4-201ENST00000265343 EIF2AK4Q9P2K8 1649 aaKnown RBP17.02■□□□□ 0.31
AFF4-201ENST00000265343 TMEM57Q8N5G2 664 aa17.02■□□□□ 0.31
AFF4-201ENST00000265343 ATP2C2O75185 946 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms