RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 TM6SF1Q9BZW5 370 aa23.65■■□□□ 1.38
NEIL3-201ENST00000264596 NECAB1Q8N987 351 aa23.64■■□□□ 1.38
NEIL3-201ENST00000264596 RAPGEF4Q8WZA2 1011 aa23.64■■□□□ 1.38
NEIL3-201ENST00000264596 KCNB2Q92953 911 aa23.64■■□□□ 1.38
NEIL3-201ENST00000264596 FSD1Q9BTV5 496 aa23.64■■□□□ 1.38
NEIL3-201ENST00000264596 NLRP2Q9NX02 1062 aa23.64■■□□□ 1.38
NEIL3-201ENST00000264596 NEXNQ0ZGT2 675 aa23.64■■□□□ 1.37
NEIL3-201ENST00000264596 LARP1Q6PKG0 1096 aaKnown RBP23.64■■□□□ 1.37
NEIL3-201ENST00000264596 XAGE3Q8WTP9 111 aa23.64■■□□□ 1.37
NEIL3-201ENST00000264596 MYD88Q99836 296 aa23.64■■□□□ 1.37
NEIL3-201ENST00000264596 ME3Q16798 604 aa23.63■■□□□ 1.37
NEIL3-201ENST00000264596 CCDC183Q5T5S1 534 aa23.63■■□□□ 1.37
NEIL3-201ENST00000264596 NFATC2IPQ8NCF5 419 aa23.63■■□□□ 1.37
NEIL3-201ENST00000264596 ZSCAN31Q96LW9 406 aaPredicted RBP23.63■■□□□ 1.37
NEIL3-201ENST00000264596 CCDC39Q9UFE4 941 aa23.63■■□□□ 1.37
NEIL3-201ENST00000264596 ZKSCAN5Q9Y2L8 839 aa23.63■■□□□ 1.37
NEIL3-201ENST00000264596 A0A0D9SFI3 127 aa23.63■■□□□ 1.37
NEIL3-201ENST00000264596 NEURL1BA8MQ27 555 aa23.63■■□□□ 1.37
NEIL3-201ENST00000264596 ST3GAL1Q11201 340 aa23.63■■□□□ 1.37
NEIL3-201ENST00000264596 JARID2Q92833 1246 aaPredicted RBP23.63■■□□□ 1.37
NEIL3-201ENST00000264596 SH2B1Q9NRF2 756 aaPredicted RBP23.63■■□□□ 1.37
NEIL3-201ENST00000264596 ATP6V1DQ9Y5K8 247 aa23.63■■□□□ 1.37
NEIL3-201ENST00000264596 TRPM3Q9HCF6 1732 aaPredicted RBP23.63■■□□□ 1.37
NEIL3-201ENST00000264596 HIP1O00291 1037 aa23.62■■□□□ 1.37
NEIL3-201ENST00000264596 UBE2HP62256 183 aa23.62■■□□□ 1.37
NEIL3-201ENST00000264596 HSP90AA2PQ14568 343 aaPredicted RBP23.62■■□□□ 1.37
NEIL3-201ENST00000264596 EPHA10Q5JZY3 1008 aa23.62■■□□□ 1.37
NEIL3-201ENST00000264596 COPS6Q7L5N1 327 aa23.62■■□□□ 1.37
NEIL3-201ENST00000264596 SLC52A2Q9HAB3 445 aa23.62■■□□□ 1.37
NEIL3-201ENST00000264596 MTMR6Q9Y217 621 aa23.62■■□□□ 1.37
NEIL3-201ENST00000264596 C5P01031 1676 aa23.62■■□□□ 1.37
NEIL3-201ENST00000264596 PIP4K2AP48426 406 aaPredicted RBP23.62■■□□□ 1.37
NEIL3-201ENST00000264596 COL9A3Q14050 684 aaPredicted RBP23.62■■□□□ 1.37
NEIL3-201ENST00000264596 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.62■■□□□ 1.37
NEIL3-201ENST00000264596 MAP4K1Q92918 833 aa23.62■■□□□ 1.37
NEIL3-201ENST00000264596 VPS37CA5D8V6 355 aaPredicted RBP23.61■■□□□ 1.37
NEIL3-201ENST00000264596 DNM1Q05193 864 aaKnown RBP23.61■■□□□ 1.37
NEIL3-201ENST00000264596 PROSER2Q86WR7 435 aaPredicted RBP23.61■■□□□ 1.37
NEIL3-201ENST00000264596 NPHP3Q7Z494 1330 aa23.61■■□□□ 1.37
NEIL3-201ENST00000264596 KDM6AO15550 1401 aaPredicted RBP23.61■■□□□ 1.37
NEIL3-201ENST00000264596 SLC27A2O14975 620 aa23.61■■□□□ 1.37
NEIL3-201ENST00000264596 GCKRQ14397 625 aa23.61■■□□□ 1.37
NEIL3-201ENST00000264596 TPCN1Q9ULQ1 816 aa23.61■■□□□ 1.37
NEIL3-201ENST00000264596 ZNF500O60304 480 aaPredicted RBP23.6■■□□□ 1.37
NEIL3-201ENST00000264596 PTMAP06454 111 aaKnown RBP23.6■■□□□ 1.37
NEIL3-201ENST00000264596 TCEANC2Q96MN5 208 aa23.6■■□□□ 1.37
NEIL3-201ENST00000264596 ADAMTS7Q9UKP4 1686 aa23.6■■□□□ 1.37
NEIL3-201ENST00000264596 TPM2P07951 284 aa23.59■■□□□ 1.37
NEIL3-201ENST00000264596 ZNF496Q96IT1 587 aaPredicted RBP23.59■■□□□ 1.37
NEIL3-201ENST00000264596 PHKG2P15735 406 aa23.59■■□□□ 1.37
NEIL3-201ENST00000264596 EDC3Q96F86 508 aaKnown RBP23.59■■□□□ 1.37
NEIL3-201ENST00000264596 TATP17735 454 aaPredicted RBP23.58■■□□□ 1.37
NEIL3-201ENST00000264596 METTL22Q9BUU2 404 aaPredicted RBP23.58■■□□□ 1.37
NEIL3-201ENST00000264596 TAF6LQ9Y6J9 622 aa23.58■■□□□ 1.36
NEIL3-201ENST00000264596 HCLS1P14317 486 aaPredicted RBP23.57■■□□□ 1.36
NEIL3-201ENST00000264596 PSMA5P28066 241 aa23.57■■□□□ 1.36
NEIL3-201ENST00000264596 ZNF589Q86UQ0 364 aaPredicted RBP23.57■■□□□ 1.36
NEIL3-201ENST00000264596 USP16Q9Y5T5 823 aa23.57■■□□□ 1.36
NEIL3-201ENST00000264596 C1orf167Q5SNV9 1468 aa23.56■■□□□ 1.36
NEIL3-201ENST00000264596 DDX17Q92841 729 aaKnown RBP23.56■■□□□ 1.36
NEIL3-201ENST00000264596 R3HCC1Q9Y3T6 440 aaKnown RBP23.56■■□□□ 1.36
NEIL3-201ENST00000264596 SCN11AQ9UI33 1791 aa23.56■■□□□ 1.36
NEIL3-201ENST00000264596 CSB-PGBD3P0DP91 1061 aa23.55■■□□□ 1.36
NEIL3-201ENST00000264596 RNF20Q5VTR2 975 aa23.55■■□□□ 1.36
NEIL3-201ENST00000264596 BLOC1S2Q6QNY1 142 aa23.55■■□□□ 1.36
NEIL3-201ENST00000264596 ANKRD13DQ6ZTN6 518 aa23.55■■□□□ 1.36
NEIL3-201ENST00000264596 MPNDQ8N594 471 aa23.55■■□□□ 1.36
NEIL3-201ENST00000264596 FAM184AQ8NB25 1140 aa23.55■■□□□ 1.36
NEIL3-201ENST00000264596 USP25Q9UHP3 1055 aa23.55■■□□□ 1.36
NEIL3-201ENST00000264596 CSPP1Q1MSJ5 1256 aa23.55■■□□□ 1.36
NEIL3-201ENST00000264596 SNRKQ9NRH2 765 aa23.55■■□□□ 1.36
NEIL3-201ENST00000264596 MED23Q9ULK4 1368 aa23.55■■□□□ 1.36
NEIL3-201ENST00000264596 LMTK3Q96Q04 1460 aa23.55■■□□□ 1.36
NEIL3-201ENST00000264596 LETM1O95202 739 aaPredicted RBP23.54■■□□□ 1.36
NEIL3-201ENST00000264596 MCM5P33992 734 aa23.54■■□□□ 1.36
NEIL3-201ENST00000264596 LARP1BQ659C4 914 aaKnown RBP23.54■■□□□ 1.36
NEIL3-201ENST00000264596 TTC5Q8N0Z6 440 aa23.54■■□□□ 1.36
NEIL3-201ENST00000264596 MEGF6O75095 1541 aa23.54■■□□□ 1.36
NEIL3-201ENST00000264596 GIMAP6Q6P9H5 292 aa23.54■■□□□ 1.36
NEIL3-201ENST00000264596 VSIG10Q8N0Z9 540 aa23.54■■□□□ 1.36
NEIL3-201ENST00000264596 NDUFB9Q9Y6M9 179 aa23.54■■□□□ 1.36
NEIL3-201ENST00000264596 FERMT3Q86UX7 667 aa23.53■■□□□ 1.36
NEIL3-201ENST00000264596 ZMYND15Q9H091 742 aa23.53■■□□□ 1.36
NEIL3-201ENST00000264596 TFCP2Q12800 502 aa23.53■■□□□ 1.36
NEIL3-201ENST00000264596 UVSSAQ2YD98 709 aa23.53■■□□□ 1.36
NEIL3-201ENST00000264596 UBE3BQ7Z3V4 1068 aa23.53■■□□□ 1.36
NEIL3-201ENST00000264596 IFNL2Q8IZJ0 200 aa23.53■■□□□ 1.36
NEIL3-201ENST00000264596 DBNLQ9UJU6 430 aaKnown RBP23.53■■□□□ 1.36
NEIL3-201ENST00000264596 ATP5J2-PTCD1G3V325 749 aa23.52■■□□□ 1.36
NEIL3-201ENST00000264596 PTCD1O75127 700 aaKnown RBP23.52■■□□□ 1.36
NEIL3-201ENST00000264596 RPS6KB1P23443 525 aa23.52■■□□□ 1.36
NEIL3-201ENST00000264596 SNRPA1P09661 255 aaKnown RBP23.52■■□□□ 1.36
NEIL3-201ENST00000264596 CDC37L1Q7L3B6 337 aa23.52■■□□□ 1.36
NEIL3-201ENST00000264596 CABLES1Q8TDN4 633 aa23.52■■□□□ 1.36
NEIL3-201ENST00000264596 KIF1AQ12756 1690 aa23.52■■□□□ 1.36
NEIL3-201ENST00000264596 STK3Q13188 491 aa23.51■■□□□ 1.35
NEIL3-201ENST00000264596 TNNI3KQ59H18 835 aa23.51■■□□□ 1.35
NEIL3-201ENST00000264596 COPRSQ9NQ92 184 aa23.51■■□□□ 1.35
NEIL3-201ENST00000264596 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.51■■□□□ 1.35
NEIL3-201ENST00000264596 FPGT-TNNI3KV9GXZ4 949 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms