RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 TRHP20396 242 aaPredicted RBP27.75■■■□□ 2.03
PREB-201ENST00000260643 CDC37L1Q7L3B6 337 aa27.75■■■□□ 2.03
PREB-201ENST00000260643 SLIT1O75093 1534 aa27.75■■■□□ 2.03
PREB-201ENST00000260643 LIG1P18858 919 aa27.75■■■□□ 2.03
PREB-201ENST00000260643 DMTNQ08495 405 aa27.75■■■□□ 2.03
PREB-201ENST00000260643 DDX19AQ9NUU7 478 aaKnown RBP27.75■■■□□ 2.03
PREB-201ENST00000260643 ARHGAP23Q9P227 1491 aa27.74■■■□□ 2.03
PREB-201ENST00000260643 RIOK3O14730 519 aaKnown RBP27.74■■■□□ 2.03
PREB-201ENST00000260643 SLC27A2O14975 620 aa27.74■■■□□ 2.03
PREB-201ENST00000260643 ZSCAN20P17040 1043 aaPredicted RBP27.74■■■□□ 2.03
PREB-201ENST00000260643 ARID3AQ99856 593 aa27.74■■■□□ 2.03
PREB-201ENST00000260643 DBF4Q9UBU7 674 aaPredicted RBP27.74■■■□□ 2.03
PREB-201ENST00000260643 EID1Q9Y6B2 187 aa27.74■■■□□ 2.03
PREB-201ENST00000260643 NPHP3Q7Z494 1330 aa27.74■■■□□ 2.03
PREB-201ENST00000260643 SPC24Q8NBT2 197 aa27.73■■■□□ 2.03
PREB-201ENST00000260643 JCADQ9P266 1359 aa27.73■■■□□ 2.03
PREB-201ENST00000260643 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.73■■■□□ 2.03
PREB-201ENST00000260643 LGR6Q9HBX8 967 aa27.73■■■□□ 2.03
PREB-201ENST00000260643 TSGA10IPQ3SY00 556 aa27.72■■■□□ 2.03
PREB-201ENST00000260643 PLPPR3Q6T4P5 718 aa27.72■■■□□ 2.03
PREB-201ENST00000260643 LTV1Q96GA3 475 aaPredicted RBP27.72■■■□□ 2.03
PREB-201ENST00000260643 NPHP4O75161 1426 aaPredicted RBP27.72■■■□□ 2.03
PREB-201ENST00000260643 NMIQ13287 307 aaPredicted RBP27.71■■■□□ 2.03
PREB-201ENST00000260643 RNF20Q5VTR2 975 aa27.71■■■□□ 2.03
PREB-201ENST00000260643 AACSQ86V21 672 aa27.71■■■□□ 2.03
PREB-201ENST00000260643 LMO7Q8WWI1 1683 aa27.71■■■□□ 2.03
PREB-201ENST00000260643 PPP4R3BQ5MIZ7 849 aa27.7■■■□□ 2.03
PREB-201ENST00000260643 TDRD7Q8NHU6 1098 aaKnown RBP27.7■■■□□ 2.03
PREB-201ENST00000260643 FAM227BQ96M60 508 aa27.7■■■□□ 2.03
PREB-201ENST00000260643 TNMDQ9H2S6 317 aa27.7■■■□□ 2.03
PREB-201ENST00000260643 CLSTN2Q9H4D0 955 aa27.7■■■□□ 2.03
PREB-201ENST00000260643 UTYO14607 1347 aa27.7■■■□□ 2.03
PREB-201ENST00000260643 MED23Q9ULK4 1368 aa27.7■■■□□ 2.02
PREB-201ENST00000260643 PTGS1P23219 599 aa27.7■■■□□ 2.02
PREB-201ENST00000260643 RPS6KB1P23443 525 aa27.7■■■□□ 2.02
PREB-201ENST00000260643 BLOC1S2Q6QNY1 142 aa27.7■■■□□ 2.02
PREB-201ENST00000260643 KSR2Q6VAB6 950 aa27.7■■■□□ 2.02
PREB-201ENST00000260643 PLA2G4DQ86XP0 818 aa27.7■■■□□ 2.02
PREB-201ENST00000260643 USHBP1Q8N6Y0 703 aa27.7■■■□□ 2.02
PREB-201ENST00000260643 IP6K1Q92551 441 aa27.7■■■□□ 2.02
PREB-201ENST00000260643 CBX8Q9HC52 389 aa27.7■■■□□ 2.02
PREB-201ENST00000260643 C9orf78Q9NZ63 289 aaPredicted RBP27.7■■■□□ 2.02
PREB-201ENST00000260643 KCNQ3O43525 872 aa27.69■■■□□ 2.02
PREB-201ENST00000260643 SYCP1Q15431 976 aa27.69■■■□□ 2.02
PREB-201ENST00000260643 LUZP1Q86V48 1076 aa27.69■■■□□ 2.02
PREB-201ENST00000260643 DACT1Q9NYF0 836 aa27.69■■■□□ 2.02
PREB-201ENST00000260643 GIGYF1O75420 1035 aaPredicted RBP27.69■■■□□ 2.02
PREB-201ENST00000260643 KCNJ4P48050 445 aa27.69■■■□□ 2.02
PREB-201ENST00000260643 PDCL2Q8N4E4 241 aa27.69■■■□□ 2.02
PREB-201ENST00000260643 ABTB2Q8N961 1025 aa27.69■■■□□ 2.02
PREB-201ENST00000260643 HMG20BQ9P0W2 317 aa27.69■■■□□ 2.02
PREB-201ENST00000260643 PA2G4Q9UQ80 394 aaKnown RBP27.69■■■□□ 2.02
PREB-201ENST00000260643 DTNBO60941 627 aa27.68■■■□□ 2.02
PREB-201ENST00000260643 LEO1Q8WVC0 666 aaPredicted RBP27.68■■■□□ 2.02
PREB-201ENST00000260643 MAP3K2Q9Y2U5 619 aa27.68■■■□□ 2.02
PREB-201ENST00000260643 HEG1Q9ULI3 1381 aa27.68■■■□□ 2.02
PREB-201ENST00000260643 SASH1O94885 1247 aa27.67■■■□□ 2.02
PREB-201ENST00000260643 AKAP4Q5JQC9 854 aa27.67■■■□□ 2.02
PREB-201ENST00000260643 NUTM2GQ5VZR2 741 aa27.67■■■□□ 2.02
PREB-201ENST00000260643 FERMT3Q86UX7 667 aa27.67■■■□□ 2.02
PREB-201ENST00000260643 SPATA32Q96LK8 384 aa27.67■■■□□ 2.02
PREB-201ENST00000260643 BTBD11A6QL63 1104 aa27.67■■■□□ 2.02
PREB-201ENST00000260643 CAVIN2O95810 425 aa27.67■■■□□ 2.02
PREB-201ENST00000260643 TOB2Q14106 344 aaPredicted RBP27.67■■■□□ 2.02
PREB-201ENST00000260643 CAMK4Q16566 473 aa27.67■■■□□ 2.02
PREB-201ENST00000260643 ATP2B3Q16720 1220 aa27.67■■■□□ 2.02
PREB-201ENST00000260643 ANO6Q4KMQ2 910 aa27.67■■■□□ 2.02
PREB-201ENST00000260643 ANXA1P04083 346 aa27.66■■■□□ 2.02
PREB-201ENST00000260643 ZNF75DP51815 510 aa27.66■■■□□ 2.02
PREB-201ENST00000260643 DDX54Q8TDD1 881 aaKnown RBP27.66■■■□□ 2.02
PREB-201ENST00000260643 EAF2Q96CJ1 260 aaPredicted RBP27.66■■■□□ 2.02
PREB-201ENST00000260643 GTPBP4Q9BZE4 634 aaKnown RBP27.66■■■□□ 2.02
PREB-201ENST00000260643 OVOS2A0A0G2JMS6 1433 aa27.66■■■□□ 2.02
PREB-201ENST00000260643 FAM177BA6PVY3 158 aa27.66■■■□□ 2.02
PREB-201ENST00000260643 FAM173BQ6P4H8 233 aa27.66■■■□□ 2.02
PREB-201ENST00000260643 TEFQ10587 303 aa27.65■■■□□ 2.02
PREB-201ENST00000260643 COL9A3Q14050 684 aaPredicted RBP27.65■■■□□ 2.02
PREB-201ENST00000260643 NBPF6Q5VWK0 638 aa27.65■■■□□ 2.02
PREB-201ENST00000260643 CCDC186Q7Z3E2 898 aa27.65■■■□□ 2.02
PREB-201ENST00000260643 NBPF4Q96M43 638 aa27.65■■■□□ 2.02
PREB-201ENST00000260643 NCAPD2Q15021 1401 aa27.65■■■□□ 2.02
PREB-201ENST00000260643 GOLGA6L4A6NEF3 574 aa27.65■■■□□ 2.02
PREB-201ENST00000260643 LARP1Q6PKG0 1096 aaKnown RBP27.65■■■□□ 2.02
PREB-201ENST00000260643 PRDM10Q9NQV6 1147 aa27.65■■■□□ 2.02
PREB-201ENST00000260643 A0A0D9SFI3 127 aa27.64■■■□□ 2.02
PREB-201ENST00000260643 NFAT5O94916 1531 aa27.64■■■□□ 2.01
PREB-201ENST00000260643 MRC1P22897 1456 aa27.64■■■□□ 2.01
PREB-201ENST00000260643 LTN1O94822 1766 aa27.64■■■□□ 2.01
PREB-201ENST00000260643 CDC25BP30305 580 aa27.63■■■□□ 2.01
PREB-201ENST00000260643 USPL1Q5W0Q7 1092 aa27.63■■■□□ 2.01
PREB-201ENST00000260643 CKAP2LQ8IYA6 745 aa27.63■■■□□ 2.01
PREB-201ENST00000260643 LINS1Q8NG48 757 aa27.63■■■□□ 2.01
PREB-201ENST00000260643 KAZALD1Q96I82 304 aa27.63■■■□□ 2.01
PREB-201ENST00000260643 G3BP1Q13283 466 aaKnown RBP eCLIP27.63■■■□□ 2.01
PREB-201ENST00000260643 CBX1P83916 185 aa27.62■■■□□ 2.01
PREB-201ENST00000260643 ZSCAN25Q6NSZ9 544 aa27.62■■■□□ 2.01
PREB-201ENST00000260643 SMTNL1A8MU46 457 aa27.62■■■□□ 2.01
PREB-201ENST00000260643 GRM8O00222 908 aa27.62■■■□□ 2.01
PREB-201ENST00000260643 CHMP3Q9Y3E7 222 aa27.62■■■□□ 2.01
PREB-201ENST00000260643 SUCLG2Q96I99 432 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms