RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 RIC3Q7Z5B4 369 aa15.74■□□□□ 0.11
PGBD1-201ENST00000259883 SPATA32Q96LK8 384 aa15.74■□□□□ 0.11
PGBD1-201ENST00000259883 KRT85P78386 507 aa15.74■□□□□ 0.11
PGBD1-201ENST00000259883 NAA30Q147X3 362 aaPredicted RBP15.74■□□□□ 0.11
PGBD1-201ENST00000259883 C1orf141Q5JVX7 400 aa15.74■□□□□ 0.11
PGBD1-201ENST00000259883 CCDC171Q6TFL3 1326 aa15.74■□□□□ 0.11
PGBD1-201ENST00000259883 ITSN1Q15811 1721 aa15.74■□□□□ 0.11
PGBD1-201ENST00000259883 PTPRUQ92729 1446 aa15.74■□□□□ 0.11
PGBD1-201ENST00000259883 DNAJC25Q9H1X3 360 aa15.74■□□□□ 0.11
PGBD1-201ENST00000259883 NPHP1O15259 732 aa15.73■□□□□ 0.11
PGBD1-201ENST00000259883 CHST3Q7LGC8 479 aa15.73■□□□□ 0.11
PGBD1-201ENST00000259883 ZNF710Q8N1W2 664 aa15.73■□□□□ 0.11
PGBD1-201ENST00000259883 MYRIPQ8NFW9 859 aa15.73■□□□□ 0.11
PGBD1-201ENST00000259883 KIF3AQ9Y496 699 aa15.73■□□□□ 0.11
PGBD1-201ENST00000259883 C3P01024 1663 aa15.73■□□□□ 0.11
PGBD1-201ENST00000259883 RIOK3O14730 519 aaKnown RBP15.73■□□□□ 0.11
PGBD1-201ENST00000259883 SLC27A2O14975 620 aa15.73■□□□□ 0.11
PGBD1-201ENST00000259883 MAP3K11Q16584 847 aa15.73■□□□□ 0.11
PGBD1-201ENST00000259883 TTC21AQ8NDW8 1320 aa15.73■□□□□ 0.11
PGBD1-201ENST00000259883 NRXN3Q9Y4C0 1643 aa15.72■□□□□ 0.11
PGBD1-201ENST00000259883 H3BQV1 296 aa15.72■□□□□ 0.11
PGBD1-201ENST00000259883 TYRO3Q06418 890 aa15.72■□□□□ 0.11
PGBD1-201ENST00000259883 IFFO2Q5TF58 517 aa15.72■□□□□ 0.11
PGBD1-201ENST00000259883 RAB11FIP4Q86YS3 637 aa15.72■□□□□ 0.11
PGBD1-201ENST00000259883 ADAMTS13Q76LX8 1427 aa15.72■□□□□ 0.11
PGBD1-201ENST00000259883 ATP5J2-PTCD1G3V325 749 aa15.72■□□□□ 0.11
PGBD1-201ENST00000259883 PTCD1O75127 700 aaKnown RBP15.72■□□□□ 0.11
PGBD1-201ENST00000259883 CHAF1AQ13111 956 aaPredicted RBP15.72■□□□□ 0.11
PGBD1-201ENST00000259883 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.72■□□□□ 0.11
PGBD1-201ENST00000259883 V9GYY5 206 aaPredicted RBP15.72■□□□□ 0.11
PGBD1-201ENST00000259883 USP31Q70CQ4 1352 aa15.72■□□□□ 0.11
PGBD1-201ENST00000259883 SASH1O94885 1247 aa15.72■□□□□ 0.11
PGBD1-201ENST00000259883 HSP90AB4PQ58FF6 505 aa15.72■□□□□ 0.11
PGBD1-201ENST00000259883 BCL2L12Q9HB09 334 aa15.72■□□□□ 0.11
PGBD1-201ENST00000259883 CCT2P78371 535 aaKnown RBP15.71■□□□□ 0.11
PGBD1-201ENST00000259883 DDX46Q7L014 1031 aaKnown RBP15.71■□□□□ 0.11
PGBD1-201ENST00000259883 KDRP35968 1356 aa15.71■□□□□ 0.11
PGBD1-201ENST00000259883 SSH2Q76I76 1423 aa15.71■□□□□ 0.11
PGBD1-201ENST00000259883 ADCY9O60503 1353 aa15.71■□□□□ 0.11
PGBD1-201ENST00000259883 NR1I2O75469 434 aa15.71■□□□□ 0.11
PGBD1-201ENST00000259883 VPS53Q5VIR6 699 aa15.71■□□□□ 0.11
PGBD1-201ENST00000259883 SYTL4Q96C24 671 aaPredicted RBP15.71■□□□□ 0.11
PGBD1-201ENST00000259883 MON2Q7Z3U7 1717 aa15.71■□□□□ 0.1
PGBD1-201ENST00000259883 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.71■□□□□ 0.1
PGBD1-201ENST00000259883 ZC3H6P61129 1189 aaKnown RBP15.7■□□□□ 0.1
PGBD1-201ENST00000259883 ARID5BQ14865 1188 aa15.7■□□□□ 0.1
PGBD1-201ENST00000259883 DBF4Q9UBU7 674 aaPredicted RBP15.7■□□□□ 0.1
PGBD1-201ENST00000259883 U2AF2P26368 475 aaKnown RBP eCLIP15.7■□□□□ 0.1
PGBD1-201ENST00000259883 EVI5LQ96CN4 794 aa15.7■□□□□ 0.1
PGBD1-201ENST00000259883 MYD88Q99836 296 aa15.7■□□□□ 0.1
PGBD1-201ENST00000259883 ZSWIM6Q9HCJ5 1215 aa15.7■□□□□ 0.1
PGBD1-201ENST00000259883 UVSSAQ2YD98 709 aa15.7■□□□□ 0.1
PGBD1-201ENST00000259883 CBX8Q9HC52 389 aa15.7■□□□□ 0.1
PGBD1-201ENST00000259883 ATP2B3Q16720 1220 aa15.69■□□□□ 0.1
PGBD1-201ENST00000259883 FILIP1Q7Z7B0 1213 aa15.69■□□□□ 0.1
PGBD1-201ENST00000259883 NEUROD6Q96NK8 337 aa15.69■□□□□ 0.1
PGBD1-201ENST00000259883 ZNF330Q9Y3S2 320 aaPredicted RBP15.69■□□□□ 0.1
PGBD1-201ENST00000259883 MRVI1Q9Y6F6 885 aa15.69■□□□□ 0.1
PGBD1-201ENST00000259883 TERF1P54274 439 aa15.69■□□□□ 0.1
PGBD1-201ENST00000259883 NECTIN1Q15223 517 aa15.69■□□□□ 0.1
PGBD1-201ENST00000259883 BRF1Q92994 677 aa15.69■□□□□ 0.1
PGBD1-201ENST00000259883 MAP7D2Q96T17 732 aa15.69■□□□□ 0.1
PGBD1-201ENST00000259883 HTATSF1O43719 755 aaKnown RBP15.68■□□□□ 0.1
PGBD1-201ENST00000259883 LETM1O95202 739 aaPredicted RBP15.68■□□□□ 0.1
PGBD1-201ENST00000259883 EPHA10Q5JZY3 1008 aa15.68■□□□□ 0.1
PGBD1-201ENST00000259883 PHF8Q9UPP1 1060 aa15.68■□□□□ 0.1
PGBD1-201ENST00000259883 AOX1Q06278 1338 aa15.68■□□□□ 0.1
PGBD1-201ENST00000259883 GRM8O00222 908 aa15.68■□□□□ 0.1
PGBD1-201ENST00000259883 SIRT1Q96EB6 747 aa15.68■□□□□ 0.1
PGBD1-201ENST00000259883 TRMT1Q9NXH9 659 aaKnown RBP15.68■□□□□ 0.1
PGBD1-201ENST00000259883 CCDC85AQ96PX6 553 aaPredicted RBP15.68■□□□□ 0.1
PGBD1-201ENST00000259883 FMNL2Q96PY5 1086 aa15.68■□□□□ 0.1
PGBD1-201ENST00000259883 NCOA5Q9HCD5 579 aaKnown RBP15.68■□□□□ 0.1
PGBD1-201ENST00000259883 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
PGBD1-201ENST00000259883 TMEM87AQ8NBN3 555 aa15.67■□□□□ 0.1
PGBD1-201ENST00000259883 FAM200AQ8TCP9 573 aa15.67■□□□□ 0.1
PGBD1-201ENST00000259883 ZSCAN31Q96LW9 406 aaPredicted RBP15.67■□□□□ 0.1
PGBD1-201ENST00000259883 SH2B1Q9NRF2 756 aaPredicted RBP15.67■□□□□ 0.1
PGBD1-201ENST00000259883 A0A0G2JLW4 131 aa15.67■□□□□ 0.1
PGBD1-201ENST00000259883 GOLGA6L6A8MZA4 724 aa15.67■□□□□ 0.1
PGBD1-201ENST00000259883 ZNF165P49910 485 aa15.67■□□□□ 0.1
PGBD1-201ENST00000259883 KSR2Q6VAB6 950 aa15.67■□□□□ 0.1
PGBD1-201ENST00000259883 PDCL2Q8N4E4 241 aa15.67■□□□□ 0.1
PGBD1-201ENST00000259883 KIAA1524Q8TCG1 905 aa15.67■□□□□ 0.1
PGBD1-201ENST00000259883 FUCA2Q9BTY2 467 aa15.67■□□□□ 0.1
PGBD1-201ENST00000259883 SETD1AO15047 1707 aaKnown RBP15.67■□□□□ 0.1
PGBD1-201ENST00000259883 NRKQ7Z2Y5 1582 aa15.67■□□□□ 0.1
PGBD1-201ENST00000259883 TTC41PQ6P2S7 1318 aa15.66■□□□□ 0.1
PGBD1-201ENST00000259883 Q6ZUG5 572 aa15.66■□□□□ 0.1
PGBD1-201ENST00000259883 UBE3BQ7Z3V4 1068 aa15.66■□□□□ 0.1
PGBD1-201ENST00000259883 KAZALD1Q96I82 304 aa15.66■□□□□ 0.1
PGBD1-201ENST00000259883 PLEKHO1Q53GL0 409 aaPredicted RBP15.66■□□□□ 0.1
PGBD1-201ENST00000259883 SPATA31D1Q6ZQQ2 1576 aa15.66■□□□□ 0.1
PGBD1-201ENST00000259883 GIGYF1O75420 1035 aaPredicted RBP15.66■□□□□ 0.1
PGBD1-201ENST00000259883 HMGN5P82970 282 aaKnown RBP15.66■□□□□ 0.1
PGBD1-201ENST00000259883 TPD52L1Q16890 204 aaPredicted RBP15.66■□□□□ 0.1
PGBD1-201ENST00000259883 RNF20Q5VTR2 975 aa15.66■□□□□ 0.1
PGBD1-201ENST00000259883 COPS6Q7L5N1 327 aa15.66■□□□□ 0.1
PGBD1-201ENST00000259883 XAGE3Q8WTP9 111 aa15.66■□□□□ 0.1
PGBD1-201ENST00000259883 LEO1Q8WVC0 666 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms