RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 FAM13BQ9NYF5 915 aa20.44■□□□□ 0.86
SLC52A1-201ENST00000254853 TPCN1Q9ULQ1 816 aa20.44■□□□□ 0.86
SLC52A1-201ENST00000254853 HEG1Q9ULI3 1381 aa20.43■□□□□ 0.86
SLC52A1-201ENST00000254853 COL9A3Q14050 684 aaPredicted RBP20.43■□□□□ 0.86
SLC52A1-201ENST00000254853 BICC1Q9H694 974 aaKnown RBP20.43■□□□□ 0.86
SLC52A1-201ENST00000254853 HDAC5Q9UQL6 1122 aa20.43■□□□□ 0.86
SLC52A1-201ENST00000254853 GRM8O00222 908 aa20.43■□□□□ 0.86
SLC52A1-201ENST00000254853 KCNJ4P48050 445 aa20.43■□□□□ 0.86
SLC52A1-201ENST00000254853 MAP4K1Q92918 833 aa20.43■□□□□ 0.86
SLC52A1-201ENST00000254853 G3BP1Q13283 466 aaKnown RBP eCLIP20.42■□□□□ 0.86
SLC52A1-201ENST00000254853 VSIG10Q8N0Z9 540 aa20.42■□□□□ 0.86
SLC52A1-201ENST00000254853 LINS1Q8NG48 757 aa20.42■□□□□ 0.86
SLC52A1-201ENST00000254853 TLR7Q9NYK1 1049 aaKnown RBP20.42■□□□□ 0.86
SLC52A1-201ENST00000254853 NCAPD2Q15021 1401 aa20.42■□□□□ 0.86
SLC52A1-201ENST00000254853 AIMP1Q12904 312 aaKnown RBP20.42■□□□□ 0.86
SLC52A1-201ENST00000254853 SLC27A2O14975 620 aa20.41■□□□□ 0.86
SLC52A1-201ENST00000254853 KDM4AO75164 1064 aa20.41■□□□□ 0.86
SLC52A1-201ENST00000254853 TTC12Q9H892 705 aaPredicted RBP20.41■□□□□ 0.86
SLC52A1-201ENST00000254853 UTYO14607 1347 aa20.41■□□□□ 0.86
SLC52A1-201ENST00000254853 A0A0D9SFI3 127 aa20.4■□□□□ 0.86
SLC52A1-201ENST00000254853 HIP1O00291 1037 aa20.4■□□□□ 0.86
SLC52A1-201ENST00000254853 SIL1Q9H173 461 aa20.39■□□□□ 0.86
SLC52A1-201ENST00000254853 BOLA2Q9H3K6 86 aa20.39■□□□□ 0.86
SLC52A1-201ENST00000254853 OVOS2A0A0G2JMS6 1433 aa20.39■□□□□ 0.85
SLC52A1-201ENST00000254853 GCP02774 474 aa20.39■□□□□ 0.85
SLC52A1-201ENST00000254853 LARP1BQ659C4 914 aaKnown RBP20.39■□□□□ 0.85
SLC52A1-201ENST00000254853 ARHGEF25Q86VW2 580 aa20.39■□□□□ 0.85
SLC52A1-201ENST00000254853 ANKRD24Q8TF21 1146 aa20.39■□□□□ 0.85
SLC52A1-201ENST00000254853 PIBF1Q8WXW3 757 aa20.39■□□□□ 0.85
SLC52A1-201ENST00000254853 SNRKQ9NRH2 765 aa20.39■□□□□ 0.85
SLC52A1-201ENST00000254853 PHRF1Q9P1Y6 1649 aaKnown RBP20.39■□□□□ 0.85
SLC52A1-201ENST00000254853 DYNC1I1O14576 645 aa20.38■□□□□ 0.85
SLC52A1-201ENST00000254853 TCEANC2Q96MN5 208 aa20.38■□□□□ 0.85
SLC52A1-201ENST00000254853 FSD1Q9BTV5 496 aa20.38■□□□□ 0.85
SLC52A1-201ENST00000254853 DDX21Q9NR30 783 aaKnown RBP eCLIP20.38■□□□□ 0.85
SLC52A1-201ENST00000254853 DDX58O95786 925 aaKnown RBP20.38■□□□□ 0.85
SLC52A1-201ENST00000254853 PSMA5P28066 241 aa20.38■□□□□ 0.85
SLC52A1-201ENST00000254853 PDIA6Q15084 440 aa20.38■□□□□ 0.85
SLC52A1-201ENST00000254853 CDC37L1Q7L3B6 337 aa20.38■□□□□ 0.85
SLC52A1-201ENST00000254853 KLHDC4Q8TBB5 520 aa20.38■□□□□ 0.85
SLC52A1-201ENST00000254853 TAF6LQ9Y6J9 622 aa20.38■□□□□ 0.85
SLC52A1-201ENST00000254853 AP5Z1O43299 807 aa20.37■□□□□ 0.85
SLC52A1-201ENST00000254853 PLCB2Q00722 1185 aa20.37■□□□□ 0.85
SLC52A1-201ENST00000254853 FERMT3Q86UX7 667 aa20.37■□□□□ 0.85
SLC52A1-201ENST00000254853 C17orf53Q8N3J3 647 aaPredicted RBP20.37■□□□□ 0.85
SLC52A1-201ENST00000254853 IGKV5-2P06315 115 aa20.37■□□□□ 0.85
SLC52A1-201ENST00000254853 NOLC1Q14978 699 aaKnown RBP eCLIP20.37■□□□□ 0.85
SLC52A1-201ENST00000254853 DNTTIP2Q5QJE6 756 aaKnown RBP20.37■□□□□ 0.85
SLC52A1-201ENST00000254853 TTC6Q86TZ1 520 aa20.37■□□□□ 0.85
SLC52A1-201ENST00000254853 FAM173BQ6P4H8 233 aa20.36■□□□□ 0.85
SLC52A1-201ENST00000254853 KLHL34Q8N239 644 aa20.36■□□□□ 0.85
SLC52A1-201ENST00000254853 BLOC1S2Q6QNY1 142 aa20.36■□□□□ 0.85
SLC52A1-201ENST00000254853 NPHP4O75161 1426 aaPredicted RBP20.36■□□□□ 0.85
SLC52A1-201ENST00000254853 KRT85P78386 507 aa20.35■□□□□ 0.85
SLC52A1-201ENST00000254853 RIC3Q7Z5B4 369 aa20.35■□□□□ 0.85
SLC52A1-201ENST00000254853 CHD2O14647 1828 aaKnown RBP20.35■□□□□ 0.85
SLC52A1-201ENST00000254853 MED23Q9ULK4 1368 aa20.35■□□□□ 0.85
SLC52A1-201ENST00000254853 RPS6KB1P23443 525 aa20.35■□□□□ 0.85
SLC52A1-201ENST00000254853 RNF20Q5VTR2 975 aa20.35■□□□□ 0.85
SLC52A1-201ENST00000254853 ZNF589Q86UQ0 364 aaPredicted RBP20.35■□□□□ 0.85
SLC52A1-201ENST00000254853 MAP7D2Q96T17 732 aa20.35■□□□□ 0.85
SLC52A1-201ENST00000254853 AXIN2Q9Y2T1 843 aa20.34■□□□□ 0.85
SLC52A1-201ENST00000254853 CHMP3Q9Y3E7 222 aa20.34■□□□□ 0.85
SLC52A1-201ENST00000254853 TOB2Q14106 344 aaPredicted RBP20.34■□□□□ 0.85
SLC52A1-201ENST00000254853 LMOD2Q6P5Q4 547 aa20.34■□□□□ 0.85
SLC52A1-201ENST00000254853 ORAI2Q96SN7 254 aa20.34■□□□□ 0.85
SLC52A1-201ENST00000254853 CCDC192P0DO97 292 aa20.33■□□□□ 0.85
SLC52A1-201ENST00000254853 LIG1P18858 919 aa20.33■□□□□ 0.85
SLC52A1-201ENST00000254853 SLC39A6Q13433 755 aa20.33■□□□□ 0.85
SLC52A1-201ENST00000254853 ANKRD1Q15327 319 aa20.33■□□□□ 0.85
SLC52A1-201ENST00000254853 EPHA10Q5JZY3 1008 aa20.33■□□□□ 0.85
SLC52A1-201ENST00000254853 EDC3Q96F86 508 aaKnown RBP20.33■□□□□ 0.85
SLC52A1-201ENST00000254853 PDCP20941 246 aa20.32■□□□□ 0.84
SLC52A1-201ENST00000254853 NEURL1BA8MQ27 555 aa20.32■□□□□ 0.84
SLC52A1-201ENST00000254853 MYL6BP14649 208 aa20.32■□□□□ 0.84
SLC52A1-201ENST00000254853 LARP1Q6PKG0 1096 aaKnown RBP20.32■□□□□ 0.84
SLC52A1-201ENST00000254853 MYRIPQ8NFW9 859 aa20.32■□□□□ 0.84
SLC52A1-201ENST00000254853 ALDH8A1Q9H2A2 487 aaPredicted RBP20.32■□□□□ 0.84
SLC52A1-201ENST00000254853 SIPA1L3O60292 1781 aaPredicted RBP20.32■□□□□ 0.84
SLC52A1-201ENST00000254853 ANKLE2Q86XL3 938 aa20.31■□□□□ 0.84
SLC52A1-201ENST00000254853 SPTLC3Q9NUV7 552 aa20.31■□□□□ 0.84
SLC52A1-201ENST00000254853 ELP1O95163 1332 aa20.31■□□□□ 0.84
SLC52A1-201ENST00000254853 SLIT3O75094 1523 aa20.31■□□□□ 0.84
SLC52A1-201ENST00000254853 PDIA4P13667 645 aaKnown RBP20.31■□□□□ 0.84
SLC52A1-201ENST00000254853 STK3Q13188 491 aa20.31■□□□□ 0.84
SLC52A1-201ENST00000254853 CAMK4Q16566 473 aa20.31■□□□□ 0.84
SLC52A1-201ENST00000254853 NUP62CLQ9H1M0 184 aa20.31■□□□□ 0.84
SLC52A1-201ENST00000254853 JCADQ9P266 1359 aa20.31■□□□□ 0.84
SLC52A1-201ENST00000254853 TAF5LO75529 589 aa20.3■□□□□ 0.84
SLC52A1-201ENST00000254853 GCKRQ14397 625 aa20.3■□□□□ 0.84
SLC52A1-201ENST00000254853 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
SLC52A1-201ENST00000254853 MYD88Q99836 296 aa20.3■□□□□ 0.84
SLC52A1-201ENST00000254853 NEXNQ0ZGT2 675 aa20.3■□□□□ 0.84
SLC52A1-201ENST00000254853 MAP3K11Q16584 847 aa20.3■□□□□ 0.84
SLC52A1-201ENST00000254853 ZNF790Q6PG37 636 aa20.3■□□□□ 0.84
SLC52A1-201ENST00000254853 ZMYND15Q9H091 742 aa20.3■□□□□ 0.84
SLC52A1-201ENST00000254853 TFIP11Q9UBB9 837 aaKnown RBP20.3■□□□□ 0.84
SLC52A1-201ENST00000254853 JARID2Q92833 1246 aaPredicted RBP20.29■□□□□ 0.84
SLC52A1-201ENST00000254853 KCNF1Q9H3M0 494 aa20.29■□□□□ 0.84
SLC52A1-201ENST00000254853 HMG20BQ9P0W2 317 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms