RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 SYNE4Q8N205 404 aa17.13■□□□□ 0.33
MRPL35-201ENST00000254644 ZNF277Q9NRM2 450 aaPredicted RBP17.13■□□□□ 0.33
MRPL35-201ENST00000254644 CHL1O00533 1208 aa17.12■□□□□ 0.33
MRPL35-201ENST00000254644 IARSP41252 1262 aaKnown RBP17.12■□□□□ 0.33
MRPL35-201ENST00000254644 PROSER3Q2NL68 480 aa17.12■□□□□ 0.33
MRPL35-201ENST00000254644 SLC10A5Q5PT55 438 aa17.12■□□□□ 0.33
MRPL35-201ENST00000254644 CRAMP1Q96RY5 1269 aa17.12■□□□□ 0.33
MRPL35-201ENST00000254644 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
MRPL35-201ENST00000254644 COL4A5P29400 1685 aa17.11■□□□□ 0.33
MRPL35-201ENST00000254644 IQCA1LA6NCM1 817 aa17.11■□□□□ 0.33
MRPL35-201ENST00000254644 EIF2S2P20042 333 aaKnown RBP17.11■□□□□ 0.33
MRPL35-201ENST00000254644 PARP10Q53GL7 1025 aa17.11■□□□□ 0.33
MRPL35-201ENST00000254644 TAF1DQ9H5J8 278 aaPredicted RBP17.11■□□□□ 0.33
MRPL35-201ENST00000254644 ZNF541Q9H0D2 1346 aa17.11■□□□□ 0.33
MRPL35-201ENST00000254644 TAF1P21675 1872 aa17.1■□□□□ 0.33
MRPL35-201ENST00000254644 GRIPAP1Q4V328 841 aa17.1■□□□□ 0.33
MRPL35-201ENST00000254644 C3orf67Q6ZVT6 689 aa17.1■□□□□ 0.33
MRPL35-201ENST00000254644 PPP1R42Q7Z4L9 355 aa17.1■□□□□ 0.33
MRPL35-201ENST00000254644 ANXA1P04083 346 aa17.09■□□□□ 0.33
MRPL35-201ENST00000254644 RPGRQ92834 1020 aaKnown RBP17.09■□□□□ 0.33
MRPL35-201ENST00000254644 RUNDC1Q96C34 613 aa17.09■□□□□ 0.33
MRPL35-201ENST00000254644 PASKQ96RG2 1323 aa17.09■□□□□ 0.33
MRPL35-201ENST00000254644 RNF123Q5XPI4 1314 aa17.08■□□□□ 0.32
MRPL35-201ENST00000254644 LDHDQ86WU2 507 aa17.08■□□□□ 0.32
MRPL35-201ENST00000254644 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
MRPL35-201ENST00000254644 CREBZFQ9NS37 354 aa17.08■□□□□ 0.32
MRPL35-201ENST00000254644 LTBP1Q14766 1721 aa17.07■□□□□ 0.32
MRPL35-201ENST00000254644 ITGBL1O95965 494 aaPredicted RBP17.07■□□□□ 0.32
MRPL35-201ENST00000254644 KRT24Q2M2I5 525 aa17.07■□□□□ 0.32
MRPL35-201ENST00000254644 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
MRPL35-201ENST00000254644 GPC2Q8N158 579 aa17.07■□□□□ 0.32
MRPL35-201ENST00000254644 RBM17Q96I25 401 aaKnown RBP17.07■□□□□ 0.32
MRPL35-201ENST00000254644 NLRP3Q96P20 1036 aa17.07■□□□□ 0.32
MRPL35-201ENST00000254644 UTP14AQ9BVJ6 771 aaKnown RBP17.07■□□□□ 0.32
MRPL35-201ENST00000254644 DDX21Q9NR30 783 aaKnown RBP eCLIP17.07■□□□□ 0.32
MRPL35-201ENST00000254644 ADAMTS8Q9UP79 889 aa17.07■□□□□ 0.32
MRPL35-201ENST00000254644 DDX60Q8IY21 1712 aaKnown RBP17.07■□□□□ 0.32
MRPL35-201ENST00000254644 NEUROD2Q15784 382 aa17.06■□□□□ 0.32
MRPL35-201ENST00000254644 SLC51AQ86UW1 340 aa17.06■□□□□ 0.32
MRPL35-201ENST00000254644 HACL1Q9UJ83 578 aa17.06■□□□□ 0.32
MRPL35-201ENST00000254644 PPEF1O14829 653 aaPredicted RBP17.05■□□□□ 0.32
MRPL35-201ENST00000254644 TCIRG1Q13488 830 aa17.05■□□□□ 0.32
MRPL35-201ENST00000254644 HSP90AB3PQ58FF7 597 aa17.05■□□□□ 0.32
MRPL35-201ENST00000254644 NLRP10Q86W26 655 aa17.05■□□□□ 0.32
MRPL35-201ENST00000254644 XAGE3Q8WTP9 111 aa17.05■□□□□ 0.32
MRPL35-201ENST00000254644 JDP2Q8WYK2 163 aa17.05■□□□□ 0.32
MRPL35-201ENST00000254644 PRKRIP1Q9H875 184 aaPredicted RBP17.05■□□□□ 0.32
MRPL35-201ENST00000254644 HOXB7P09629 217 aa17.04■□□□□ 0.32
MRPL35-201ENST00000254644 EPHX2P34913 555 aa17.04■□□□□ 0.32
MRPL35-201ENST00000254644 COL13A1Q5TAT6 717 aaPredicted RBP17.04■□□□□ 0.32
MRPL35-201ENST00000254644 ATP6V0A2Q9Y487 856 aa17.04■□□□□ 0.32
MRPL35-201ENST00000254644 ABCC4O15439 1325 aa17.03■□□□□ 0.32
MRPL35-201ENST00000254644 WDR43Q15061 677 aaKnown RBP eCLIP17.03■□□□□ 0.32
MRPL35-201ENST00000254644 PNMA8AQ86V59 439 aaPredicted RBP17.03■□□□□ 0.32
MRPL35-201ENST00000254644 NECTIN2Q92692 538 aa17.03■□□□□ 0.32
MRPL35-201ENST00000254644 CFAP44Q96MT7 982 aa17.03■□□□□ 0.32
MRPL35-201ENST00000254644 VPS33BQ9H267 617 aa17.03■□□□□ 0.32
MRPL35-201ENST00000254644 LRRC37AA6NMS7 1700 aa17.03■□□□□ 0.32
MRPL35-201ENST00000254644 TRPM7Q96QT4 1865 aa17.02■□□□□ 0.32
MRPL35-201ENST00000254644 ZNF853P0CG23 659 aa17.02■□□□□ 0.32
MRPL35-201ENST00000254644 AIMP1Q12904 312 aaKnown RBP17.02■□□□□ 0.32
MRPL35-201ENST00000254644 RTFDC1Q9BY42 306 aaPredicted RBP17.02■□□□□ 0.32
MRPL35-201ENST00000254644 CHPF2Q9P2E5 772 aa17.02■□□□□ 0.32
MRPL35-201ENST00000254644 BBOX1O75936 387 aa17.01■□□□□ 0.31
MRPL35-201ENST00000254644 EIF6P56537 245 aaKnown RBP17.01■□□□□ 0.31
MRPL35-201ENST00000254644 SP8Q8IXZ3 490 aa17.01■□□□□ 0.31
MRPL35-201ENST00000254644 LARGE2Q8N3Y3 721 aa17.01■□□□□ 0.31
MRPL35-201ENST00000254644 CNTNAP1P78357 1384 aa17.01■□□□□ 0.31
MRPL35-201ENST00000254644 SH3TC1Q8TE82 1336 aa17■□□□□ 0.31
MRPL35-201ENST00000254644 HSPA1AP0DMV8 641 aaKnown RBP17■□□□□ 0.31
MRPL35-201ENST00000254644 HSPA1BP0DMV9 641 aaKnown RBP17■□□□□ 0.31
MRPL35-201ENST00000254644 HCLS1P14317 486 aaPredicted RBP17■□□□□ 0.31
MRPL35-201ENST00000254644 SCNN1DP51172 638 aa17■□□□□ 0.31
MRPL35-201ENST00000254644 EAPPQ56P03 285 aaPredicted RBP17■□□□□ 0.31
MRPL35-201ENST00000254644 PLBD2Q8NHP8 589 aa17■□□□□ 0.31
MRPL35-201ENST00000254644 ISCA1Q9BUE6 129 aa17■□□□□ 0.31
MRPL35-201ENST00000254644 DBF4Q9UBU7 674 aaPredicted RBP17■□□□□ 0.31
MRPL35-201ENST00000254644 LAS1LQ9Y4W2 734 aaKnown RBP17■□□□□ 0.31
MRPL35-201ENST00000254644 TMEM88BA6NKF7 163 aa16.99■□□□□ 0.31
MRPL35-201ENST00000254644 TCERG1O14776 1098 aaKnown RBP16.99■□□□□ 0.31
MRPL35-201ENST00000254644 HDGFL1Q5TGJ6 251 aa16.99■□□□□ 0.31
MRPL35-201ENST00000254644 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
MRPL35-201ENST00000254644 MBIPQ9NS73 344 aa16.99■□□□□ 0.31
MRPL35-201ENST00000254644 MKRN1Q9UHC7 482 aaKnown RBP16.99■□□□□ 0.31
MRPL35-201ENST00000254644 TRMT112Q9UI30 125 aaKnown RBP16.99■□□□□ 0.31
MRPL35-201ENST00000254644 DUSP27Q5VZP5 1158 aa16.98■□□□□ 0.31
MRPL35-201ENST00000254644 CNTROBQ8N137 903 aa16.98■□□□□ 0.31
MRPL35-201ENST00000254644 DUOX1Q9NRD9 1551 aa16.98■□□□□ 0.31
MRPL35-201ENST00000254644 PPIP5K2O43314 1243 aa16.97■□□□□ 0.31
MRPL35-201ENST00000254644 EPS15P42566 896 aa16.97■□□□□ 0.31
MRPL35-201ENST00000254644 TRIM28Q13263 835 aaKnown RBP16.97■□□□□ 0.31
MRPL35-201ENST00000254644 GRAPQ13588 217 aa16.97■□□□□ 0.31
MRPL35-201ENST00000254644 MAP1SQ66K74 1059 aaPredicted RBP16.97■□□□□ 0.31
MRPL35-201ENST00000254644 NIM1KQ8IY84 436 aa16.97■□□□□ 0.31
MRPL35-201ENST00000254644 SUPT20HQ8NEM7 779 aa16.97■□□□□ 0.31
MRPL35-201ENST00000254644 GRAPLQ8TC17 118 aaPredicted RBP16.97■□□□□ 0.31
MRPL35-201ENST00000254644 HYPKQ9NX55 129 aa16.97■□□□□ 0.31
MRPL35-201ENST00000254644 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
MRPL35-201ENST00000254644 GJA3Q9Y6H8 435 aa16.97■□□□□ 0.31
MRPL35-201ENST00000254644 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms