RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 NIP7Q9Y221 180 aaKnown RBP eCLIP17.59■□□□□ 0.41
UBE4B-201ENST00000253251 CCAR1Q8IX12 1150 aaKnown RBP17.59■□□□□ 0.41
UBE4B-201ENST00000253251 ZNF444Q8N0Y2 327 aaPredicted RBP17.59■□□□□ 0.41
UBE4B-201ENST00000253251 ACSBG1Q96GR2 724 aa17.59■□□□□ 0.41
UBE4B-201ENST00000253251 METTL22Q9BUU2 404 aaPredicted RBP17.59■□□□□ 0.41
UBE4B-201ENST00000253251 RTCBQ9Y3I0 505 aaKnown RBP17.59■□□□□ 0.41
UBE4B-201ENST00000253251 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.59■□□□□ 0.41
UBE4B-201ENST00000253251 A2ML1A8K2U0 1454 aa17.58■□□□□ 0.41
UBE4B-201ENST00000253251 RAD50Q92878 1312 aa17.58■□□□□ 0.41
UBE4B-201ENST00000253251 CCDC178Q5BJE1 867 aa17.58■□□□□ 0.4
UBE4B-201ENST00000253251 CDC42BPBQ9Y5S2 1711 aa17.58■□□□□ 0.4
UBE4B-201ENST00000253251 C6orf229H3BNL8 230 aa17.58■□□□□ 0.4
UBE4B-201ENST00000253251 TBC1D2Q9BYX2 928 aa17.58■□□□□ 0.4
UBE4B-201ENST00000253251 SLC12A7Q9Y666 1083 aa17.58■□□□□ 0.4
UBE4B-201ENST00000253251 RNF123Q5XPI4 1314 aa17.58■□□□□ 0.4
UBE4B-201ENST00000253251 CCDC173Q0VFZ6 552 aa17.58■□□□□ 0.4
UBE4B-201ENST00000253251 KRT24Q2M2I5 525 aa17.58■□□□□ 0.4
UBE4B-201ENST00000253251 CCDC191Q8NCU4 936 aa17.58■□□□□ 0.4
UBE4B-201ENST00000253251 NEK1Q96PY6 1258 aa17.58■□□□□ 0.4
UBE4B-201ENST00000253251 ESYT1Q9BSJ8 1104 aa17.58■□□□□ 0.4
UBE4B-201ENST00000253251 TRIM5Q9C035 493 aa17.58■□□□□ 0.4
UBE4B-201ENST00000253251 BCL11BQ9C0K0 894 aaPredicted RBP17.58■□□□□ 0.4
UBE4B-201ENST00000253251 CEBPZQ03701 1054 aaKnown RBP17.57■□□□□ 0.4
UBE4B-201ENST00000253251 CRACR2BQ8N4Y2 399 aaPredicted RBP17.57■□□□□ 0.4
UBE4B-201ENST00000253251 MAGEC2Q9UBF1 373 aaPredicted RBP17.57■□□□□ 0.4
UBE4B-201ENST00000253251 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.57■□□□□ 0.4
UBE4B-201ENST00000253251 GOLGA6L1Q8N7Z2 621 aa17.57■□□□□ 0.4
UBE4B-201ENST00000253251 NCOA7Q8NI08 942 aa17.57■□□□□ 0.4
UBE4B-201ENST00000253251 CLTCL1P53675 1640 aa17.57■□□□□ 0.4
UBE4B-201ENST00000253251 CCP110O43303 1012 aa17.57■□□□□ 0.4
UBE4B-201ENST00000253251 AOX1Q06278 1338 aa17.56■□□□□ 0.4
UBE4B-201ENST00000253251 ERBB4Q15303 1308 aa17.56■□□□□ 0.4
UBE4B-201ENST00000253251 STK11IPQ8N1F8 1099 aa17.56■□□□□ 0.4
UBE4B-201ENST00000253251 SEC63Q9UGP8 760 aaKnown RBP17.56■□□□□ 0.4
UBE4B-201ENST00000253251 KDM4AO75164 1064 aa17.56■□□□□ 0.4
UBE4B-201ENST00000253251 PDE4BQ07343 736 aa17.56■□□□□ 0.4
UBE4B-201ENST00000253251 PPP4R3BQ5MIZ7 849 aa17.56■□□□□ 0.4
UBE4B-201ENST00000253251 HOMER1Q86YM7 354 aa17.56■□□□□ 0.4
UBE4B-201ENST00000253251 NUP62CLQ9H1M0 184 aa17.56■□□□□ 0.4
UBE4B-201ENST00000253251 SPHKAPQ2M3C7 1700 aa17.56■□□□□ 0.4
UBE4B-201ENST00000253251 C8orf76Q96K31 380 aa17.56■□□□□ 0.4
UBE4B-201ENST00000253251 CRNKL1Q9BZJ0 848 aaKnown RBP17.56■□□□□ 0.4
UBE4B-201ENST00000253251 IFIT3O14879 490 aaKnown RBP17.56■□□□□ 0.4
UBE4B-201ENST00000253251 EPS15P42566 896 aa17.56■□□□□ 0.4
UBE4B-201ENST00000253251 MCMDC2Q4G0Z9 681 aa17.55■□□□□ 0.4
UBE4B-201ENST00000253251 CATIPQ7Z7H3 387 aa17.55■□□□□ 0.4
UBE4B-201ENST00000253251 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
UBE4B-201ENST00000253251 BMP2KQ9NSY1 1161 aaPredicted RBP17.55■□□□□ 0.4
UBE4B-201ENST00000253251 KRT18P05783 430 aaKnown RBP17.55■□□□□ 0.4
UBE4B-201ENST00000253251 ANKRD2Q9GZV1 360 aa17.55■□□□□ 0.4
UBE4B-201ENST00000253251 TMTC2Q8N394 836 aa17.55■□□□□ 0.4
UBE4B-201ENST00000253251 RNF214Q8ND24 703 aa17.55■□□□□ 0.4
UBE4B-201ENST00000253251 EIF4A1P60842 406 aaKnown RBP17.54■□□□□ 0.4
UBE4B-201ENST00000253251 SMARCE1Q969G3 411 aa17.54■□□□□ 0.4
UBE4B-201ENST00000253251 CNNM2Q9H8M5 875 aa17.54■□□□□ 0.4
UBE4B-201ENST00000253251 KIF5BP33176 963 aa17.54■□□□□ 0.4
UBE4B-201ENST00000253251 CWF19L2Q2TBE0 894 aaKnown RBP17.54■□□□□ 0.4
UBE4B-201ENST00000253251 CEP57L1Q8IYX8 460 aa17.54■□□□□ 0.4
UBE4B-201ENST00000253251 A0A0U1RQG5 324 aaPredicted RBP17.54■□□□□ 0.4
UBE4B-201ENST00000253251 DDX11Q96FC9 970 aa17.54■□□□□ 0.4
UBE4B-201ENST00000253251 KRT23Q9C075 422 aa17.54■□□□□ 0.4
UBE4B-201ENST00000253251 GOLGA8AA7E2F4 631 aa17.53■□□□□ 0.4
UBE4B-201ENST00000253251 GOLGA8BA8MQT2 603 aa17.53■□□□□ 0.4
UBE4B-201ENST00000253251 SNRKQ9NRH2 765 aa17.53■□□□□ 0.4
UBE4B-201ENST00000253251 RANBP6O60518 1105 aaKnown RBP17.53■□□□□ 0.4
UBE4B-201ENST00000253251 GNAT2P19087 354 aa17.53■□□□□ 0.4
UBE4B-201ENST00000253251 MFSD6Q6ZSS7 791 aa17.53■□□□□ 0.4
UBE4B-201ENST00000253251 MCM5P33992 734 aa17.53■□□□□ 0.4
UBE4B-201ENST00000253251 SNX21Q969T3 373 aa17.53■□□□□ 0.4
UBE4B-201ENST00000253251 LGR6Q9HBX8 967 aa17.53■□□□□ 0.4
UBE4B-201ENST00000253251 CBFA2T2O43439 604 aa17.52■□□□□ 0.4
UBE4B-201ENST00000253251 SSRP1Q08945 709 aaKnown RBP17.52■□□□□ 0.4
UBE4B-201ENST00000253251 IGSF1Q8N6C5 1336 aa17.52■□□□□ 0.4
UBE4B-201ENST00000253251 SKAP1Q86WV1 359 aa17.52■□□□□ 0.4
UBE4B-201ENST00000253251 CCDC12Q8WUD4 166 aaPredicted RBP17.52■□□□□ 0.4
UBE4B-201ENST00000253251 TRPM1Q7Z4N2 1603 aa17.52■□□□□ 0.4
UBE4B-201ENST00000253251 R3HCC1Q9Y3T6 440 aaKnown RBP17.52■□□□□ 0.4
UBE4B-201ENST00000253251 SMC2O95347 1197 aa17.52■□□□□ 0.39
UBE4B-201ENST00000253251 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.39
UBE4B-201ENST00000253251 TNNQ9UQP3 1299 aa17.52■□□□□ 0.39
UBE4B-201ENST00000253251 CDK12Q9NYV4 1490 aaPredicted RBP17.52■□□□□ 0.39
UBE4B-201ENST00000253251 ADGRB3O60242 1522 aa17.52■□□□□ 0.39
UBE4B-201ENST00000253251 ARHGEF25Q86VW2 580 aa17.51■□□□□ 0.39
UBE4B-201ENST00000253251 PAG1Q9NWQ8 432 aa17.51■□□□□ 0.39
UBE4B-201ENST00000253251 HLA-DOAP06340 250 aa17.51■□□□□ 0.39
UBE4B-201ENST00000253251 G2E3Q7L622 706 aa17.51■□□□□ 0.39
UBE4B-201ENST00000253251 PLEKHM2Q8IWE5 1019 aa17.51■□□□□ 0.39
UBE4B-201ENST00000253251 ZNF804AQ7Z570 1209 aa17.51■□□□□ 0.39
UBE4B-201ENST00000253251 SMTNL1A8MU46 457 aa17.51■□□□□ 0.39
UBE4B-201ENST00000253251 MAP3K11Q16584 847 aa17.51■□□□□ 0.39
UBE4B-201ENST00000253251 CTAGE5O15320 804 aa17.5■□□□□ 0.39
UBE4B-201ENST00000253251 OFD1O75665 1012 aa17.5■□□□□ 0.39
UBE4B-201ENST00000253251 PLEKHF1Q96S99 279 aa17.5■□□□□ 0.39
UBE4B-201ENST00000253251 SH3TC1Q8TE82 1336 aa17.5■□□□□ 0.39
UBE4B-201ENST00000253251 PHKG2P15735 406 aa17.5■□□□□ 0.39
UBE4B-201ENST00000253251 GPS2Q13227 327 aa17.5■□□□□ 0.39
UBE4B-201ENST00000253251 TMEM67Q5HYA8 995 aa17.5■□□□□ 0.39
UBE4B-201ENST00000253251 FAM43AQ8N2R8 423 aa17.5■□□□□ 0.39
UBE4B-201ENST00000253251 BICC1Q9H694 974 aaKnown RBP17.5■□□□□ 0.39
UBE4B-201ENST00000253251 USP19O94966 1318 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms