RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 AFDNP55196 1824 aaKnown RBP28.91■■■□□ 2.22
APOE-201ENST00000252486 NEURL1BA8MQ27 555 aa28.9■■■□□ 2.22
APOE-201ENST00000252486 ALDH1L1O75891 902 aa28.9■■■□□ 2.22
APOE-201ENST00000252486 GTF2E1P29083 439 aaPredicted RBP28.9■■■□□ 2.22
APOE-201ENST00000252486 ST5P78524 1137 aa28.9■■■□□ 2.22
APOE-201ENST00000252486 NTSR2O95665 410 aa28.89■■■□□ 2.22
APOE-201ENST00000252486 MS4A1P11836 297 aa28.89■■■□□ 2.22
APOE-201ENST00000252486 TRIM27P14373 513 aa28.89■■■□□ 2.22
APOE-201ENST00000252486 CCT4P50991 539 aaKnown RBP28.89■■■□□ 2.22
APOE-201ENST00000252486 TRMT112Q9UI30 125 aaKnown RBP28.89■■■□□ 2.22
APOE-201ENST00000252486 FAM177BA6PVY3 158 aa28.88■■■□□ 2.21
APOE-201ENST00000252486 PRR5LQ6MZQ0 368 aa28.88■■■□□ 2.21
APOE-201ENST00000252486 ABCC4O15439 1325 aa28.88■■■□□ 2.21
APOE-201ENST00000252486 CWF19L2Q2TBE0 894 aaKnown RBP28.87■■■□□ 2.21
APOE-201ENST00000252486 SH3TC1Q8TE82 1336 aa28.87■■■□□ 2.21
APOE-201ENST00000252486 C10orf71Q711Q0 1435 aa28.86■■■□□ 2.21
APOE-201ENST00000252486 HSP90B1P14625 803 aaKnown RBP28.86■■■□□ 2.21
APOE-201ENST00000252486 ZBTB38Q8NAP3 1195 aaPredicted RBP28.86■■■□□ 2.21
APOE-201ENST00000252486 CD2APQ9Y5K6 639 aa28.86■■■□□ 2.21
APOE-201ENST00000252486 N4BP2Q86UW6 1770 aaPredicted RBP28.85■■■□□ 2.21
APOE-201ENST00000252486 PCCAP05165 728 aaPredicted RBP28.85■■■□□ 2.21
APOE-201ENST00000252486 GCKRQ14397 625 aa28.85■■■□□ 2.21
APOE-201ENST00000252486 RIC1Q4ADV7 1423 aa28.85■■■□□ 2.21
APOE-201ENST00000252486 FTSJ3Q8IY81 847 aaKnown RBP28.84■■■□□ 2.21
APOE-201ENST00000252486 DZIP1LQ8IYY4 767 aaKnown RBP28.84■■■□□ 2.21
APOE-201ENST00000252486 BRIP1Q9BX63 1249 aa28.84■■■□□ 2.21
APOE-201ENST00000252486 INTS3Q68E01 1043 aaKnown RBP28.83■■■□□ 2.21
APOE-201ENST00000252486 PDZRN3Q9UPQ7 1066 aa28.83■■■□□ 2.21
APOE-201ENST00000252486 KIF13BQ9NQT8 1826 aa28.83■■■□□ 2.21
APOE-201ENST00000252486 ERFEQ4G0M1 354 aa28.82■■■□□ 2.2
APOE-201ENST00000252486 SLC10A5Q5PT55 438 aa28.82■■■□□ 2.2
APOE-201ENST00000252486 NUTM1Q86Y26 1132 aa28.82■■■□□ 2.2
APOE-201ENST00000252486 PDE6BP35913 854 aa28.81■■■□□ 2.2
APOE-201ENST00000252486 FAM89AQ96GI7 184 aa28.81■■■□□ 2.2
APOE-201ENST00000252486 H7C1W4 665 aa28.8■■■□□ 2.2
APOE-201ENST00000252486 CLUAP1Q96AJ1 413 aa28.8■■■□□ 2.2
APOE-201ENST00000252486 C9orf78Q9NZ63 289 aaPredicted RBP28.8■■■□□ 2.2
APOE-201ENST00000252486 CDHR2Q9BYE9 1310 aa28.79■■■□□ 2.2
APOE-201ENST00000252486 GRM8O00222 908 aa28.79■■■□□ 2.2
APOE-201ENST00000252486 TGFB2P61812 414 aa28.79■■■□□ 2.2
APOE-201ENST00000252486 ABCC12Q96J65 1359 aa28.78■■■□□ 2.2
APOE-201ENST00000252486 KLHL34Q8N239 644 aa28.78■■■□□ 2.2
APOE-201ENST00000252486 IRS4O14654 1257 aaPredicted RBP28.77■■■□□ 2.2
APOE-201ENST00000252486 PDE3AQ14432 1141 aa28.77■■■□□ 2.2
APOE-201ENST00000252486 UBE3BQ7Z3V4 1068 aa28.77■■■□□ 2.2
APOE-201ENST00000252486 NLRP3Q96P20 1036 aa28.77■■■□□ 2.2
APOE-201ENST00000252486 FHDC1Q9C0D6 1143 aaPredicted RBP28.77■■■□□ 2.2
APOE-201ENST00000252486 TNNQ9UQP3 1299 aa28.77■■■□□ 2.2
APOE-201ENST00000252486 RRP1P56182 461 aaKnown RBP28.76■■■□□ 2.19
APOE-201ENST00000252486 CCDC24Q8N4L8 307 aa28.76■■■□□ 2.19
APOE-201ENST00000252486 HDAC5Q9UQL6 1122 aa28.76■■■□□ 2.19
APOE-201ENST00000252486 LAMB2P55268 1798 aa28.75■■■□□ 2.19
APOE-201ENST00000252486 UTYO14607 1347 aa28.75■■■□□ 2.19
APOE-201ENST00000252486 ANKRD31Q8N7Z5 1873 aa28.75■■■□□ 2.19
APOE-201ENST00000252486 PLIN1O60240 522 aa28.75■■■□□ 2.19
APOE-201ENST00000252486 RTL5Q5HYW3 569 aaPredicted RBP28.75■■■□□ 2.19
APOE-201ENST00000252486 TMEM57Q8N5G2 664 aa28.75■■■□□ 2.19
APOE-201ENST00000252486 KLRG2A4D1S0 409 aaPredicted RBP28.74■■■□□ 2.19
APOE-201ENST00000252486 SYNE4Q8N205 404 aa28.74■■■□□ 2.19
APOE-201ENST00000252486 H0YIN7 160 aa28.73■■■□□ 2.19
APOE-201ENST00000252486 PDE8AO60658 829 aa28.73■■■□□ 2.19
APOE-201ENST00000252486 HCLS1P14317 486 aaPredicted RBP28.73■■■□□ 2.19
APOE-201ENST00000252486 CASP7P55210 303 aa28.73■■■□□ 2.19
APOE-201ENST00000252486 CENPBP07199 599 aaPredicted RBP28.72■■■□□ 2.19
APOE-201ENST00000252486 RLBP1P12271 317 aa28.72■■■□□ 2.19
APOE-201ENST00000252486 SYT17Q9BSW7 474 aa28.72■■■□□ 2.19
APOE-201ENST00000252486 PLA2G12BQ9BX93 195 aa28.72■■■□□ 2.19
APOE-201ENST00000252486 USP44Q9H0E7 712 aa28.72■■■□□ 2.19
APOE-201ENST00000252486 DDX60Q8IY21 1712 aaKnown RBP28.72■■■□□ 2.19
APOE-201ENST00000252486 GNAI3P08754 354 aa28.71■■■□□ 2.19
APOE-201ENST00000252486 C2CD5Q86YS7 1000 aa28.71■■■□□ 2.19
APOE-201ENST00000252486 ITPRIPQ8IWB1 547 aa28.71■■■□□ 2.19
APOE-201ENST00000252486 PANK1Q8TE04 598 aa28.71■■■□□ 2.19
APOE-201ENST00000252486 JARID2Q92833 1246 aaPredicted RBP28.71■■■□□ 2.19
APOE-201ENST00000252486 CRY2Q49AN0 593 aa28.7■■■□□ 2.18
APOE-201ENST00000252486 TNRC6CQ9HCJ0 1690 aaKnown RBP28.7■■■□□ 2.18
APOE-201ENST00000252486 CHMP4BQ9H444 224 aaKnown RBP28.69■■■□□ 2.18
APOE-201ENST00000252486 NBPF7P0C2Y1 421 aaPredicted RBP28.68■■■□□ 2.18
APOE-201ENST00000252486 UBTFL1P0CB47 393 aaPredicted RBP28.68■■■□□ 2.18
APOE-201ENST00000252486 SRGNP10124 158 aa28.68■■■□□ 2.18
APOE-201ENST00000252486 NPR1P16066 1061 aa28.68■■■□□ 2.18
APOE-201ENST00000252486 SF3B3Q15393 1217 aaKnown RBP28.68■■■□□ 2.18
APOE-201ENST00000252486 MASTLQ96GX5 879 aa28.68■■■□□ 2.18
APOE-201ENST00000252486 KIAA1551Q9HCM1 1747 aa28.67■■■□□ 2.18
APOE-201ENST00000252486 MVPQ14764 893 aaKnown RBP28.67■■■□□ 2.18
APOE-201ENST00000252486 STYK1Q6J9G0 422 aa28.67■■■□□ 2.18
APOE-201ENST00000252486 RPGRQ92834 1020 aaKnown RBP28.67■■■□□ 2.18
APOE-201ENST00000252486 DLEC1Q9Y238 1755 aa28.66■■■□□ 2.18
APOE-201ENST00000252486 A0A0G2JLW4 131 aa28.66■■■□□ 2.18
APOE-201ENST00000252486 DPEP1P16444 411 aa28.66■■■□□ 2.18
APOE-201ENST00000252486 CTSWP56202 376 aa28.66■■■□□ 2.18
APOE-201ENST00000252486 CCDC152Q4G0S7 254 aa28.66■■■□□ 2.18
APOE-201ENST00000252486 DDX19BQ9UMR2 479 aa28.66■■■□□ 2.18
APOE-201ENST00000252486 SUPT16HQ9Y5B9 1047 aaKnown RBP28.66■■■□□ 2.18
APOE-201ENST00000252486 MYH3P11055 1940 aa28.65■■■□□ 2.18
APOE-201ENST00000252486 CHRNA5P30532 468 aa28.65■■■□□ 2.18
APOE-201ENST00000252486 HOXA10P31260 410 aaPredicted RBP28.65■■■□□ 2.18
APOE-201ENST00000252486 NLGN2Q8NFZ4 835 aa28.65■■■□□ 2.18
APOE-201ENST00000252486 MEIS3Q99687 375 aa28.65■■■□□ 2.18
APOE-201ENST00000252486 COL11A2P13942 1736 aaPredicted RBP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms