RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 JAKMIP1Q96N16 626 aaKnown RBP20.94■□□□□ 0.94
LRFN3-201ENST00000246529 ZNF445P59923 1031 aa20.94■□□□□ 0.94
LRFN3-201ENST00000246529 GDPD2Q9HCC8 539 aa20.94■□□□□ 0.94
LRFN3-201ENST00000246529 COL9A3Q14050 684 aaPredicted RBP20.93■□□□□ 0.94
LRFN3-201ENST00000246529 PRDM11Q9NQV5 511 aa20.93■□□□□ 0.94
LRFN3-201ENST00000246529 TMEM63CQ9P1W3 806 aa20.93■□□□□ 0.94
LRFN3-201ENST00000246529 A0A087WZG4 1122 aa20.93■□□□□ 0.94
LRFN3-201ENST00000246529 A0A0D9SFI3 127 aa20.93■□□□□ 0.94
LRFN3-201ENST00000246529 RFX5P48382 616 aaPredicted RBP20.93■□□□□ 0.94
LRFN3-201ENST00000246529 NASPP49321 788 aaPredicted RBP20.93■□□□□ 0.94
LRFN3-201ENST00000246529 TOM1L2Q6ZVM7 507 aa20.93■□□□□ 0.94
LRFN3-201ENST00000246529 FSD1Q9BTV5 496 aa20.93■□□□□ 0.94
LRFN3-201ENST00000246529 LIMCH1Q9UPQ0 1083 aa20.93■□□□□ 0.94
LRFN3-201ENST00000246529 NDUFB9Q9Y6M9 179 aa20.93■□□□□ 0.94
LRFN3-201ENST00000246529 CPDO75976 1380 aa20.93■□□□□ 0.94
LRFN3-201ENST00000246529 CCDC171Q6TFL3 1326 aa20.92■□□□□ 0.94
LRFN3-201ENST00000246529 RPAP1Q9BWH6 1393 aaPredicted RBP20.92■□□□□ 0.94
LRFN3-201ENST00000246529 PTPN12Q05209 780 aaKnown RBP20.92■□□□□ 0.94
LRFN3-201ENST00000246529 NBPF26B4DH59 902 aa20.92■□□□□ 0.94
LRFN3-201ENST00000246529 TFCP2Q12800 502 aa20.92■□□□□ 0.94
LRFN3-201ENST00000246529 NBPF14Q5TI25 921 aa20.92■□□□□ 0.94
LRFN3-201ENST00000246529 NBPF10Q6P3W6 841 aaKnown RBP20.92■□□□□ 0.94
LRFN3-201ENST00000246529 NBPF15Q8N660 670 aa20.92■□□□□ 0.94
LRFN3-201ENST00000246529 RBM8AQ9Y5S9 174 aaKnown RBP20.92■□□□□ 0.94
LRFN3-201ENST00000246529 NECTIN1Q15223 517 aa20.91■□□□□ 0.94
LRFN3-201ENST00000246529 PRIM1P49642 420 aaKnown RBP20.91■□□□□ 0.94
LRFN3-201ENST00000246529 KCNJ4P48050 445 aa20.9■□□□□ 0.94
LRFN3-201ENST00000246529 PDRG1Q9NUG6 133 aa20.9■□□□□ 0.94
LRFN3-201ENST00000246529 DBNLQ9UJU6 430 aaKnown RBP20.9■□□□□ 0.94
LRFN3-201ENST00000246529 ABCC6O95255 1503 aa20.9■□□□□ 0.94
LRFN3-201ENST00000246529 ZCRB1Q8TBF4 217 aaKnown RBP20.89■□□□□ 0.94
LRFN3-201ENST00000246529 RBSNQ9H1K0 784 aa20.89■□□□□ 0.94
LRFN3-201ENST00000246529 COPRSQ9NQ92 184 aa20.89■□□□□ 0.94
LRFN3-201ENST00000246529 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.89■□□□□ 0.94
LRFN3-201ENST00000246529 PKD1L3Q7Z443 1732 aa20.89■□□□□ 0.94
LRFN3-201ENST00000246529 CREB3L3Q68CJ9 461 aa20.89■□□□□ 0.93
LRFN3-201ENST00000246529 TTLL7Q6ZT98 887 aa20.89■□□□□ 0.93
LRFN3-201ENST00000246529 TAF6LQ9Y6J9 622 aa20.89■□□□□ 0.93
LRFN3-201ENST00000246529 CHGBP05060 677 aa20.88■□□□□ 0.93
LRFN3-201ENST00000246529 CCDC83Q8IWF9 413 aa20.88■□□□□ 0.93
LRFN3-201ENST00000246529 PLBD2Q8NHP8 589 aa20.88■□□□□ 0.93
LRFN3-201ENST00000246529 CCDC9Q9Y3X0 531 aaKnown RBP20.88■□□□□ 0.93
LRFN3-201ENST00000246529 WDR17Q8IZU2 1322 aa20.88■□□□□ 0.93
LRFN3-201ENST00000246529 WDR33Q9C0J8 1336 aaKnown RBP20.88■□□□□ 0.93
LRFN3-201ENST00000246529 GLI3P10071 1580 aa20.88■□□□□ 0.93
LRFN3-201ENST00000246529 SYCE3A1L190 88 aa20.88■□□□□ 0.93
LRFN3-201ENST00000246529 GADD45BO75293 160 aaPredicted RBP20.88■□□□□ 0.93
LRFN3-201ENST00000246529 A1BGP04217 495 aa20.88■□□□□ 0.93
LRFN3-201ENST00000246529 TNNI3KQ59H18 835 aa20.88■□□□□ 0.93
LRFN3-201ENST00000246529 ZNF589Q86UQ0 364 aaPredicted RBP20.88■□□□□ 0.93
LRFN3-201ENST00000246529 ZSWIM6Q9HCJ5 1215 aa20.88■□□□□ 0.93
LRFN3-201ENST00000246529 FPGT-TNNI3KV9GXZ4 949 aa20.88■□□□□ 0.93
LRFN3-201ENST00000246529 ERBB4Q15303 1308 aa20.88■□□□□ 0.93
LRFN3-201ENST00000246529 CASP7P55210 303 aa20.87■□□□□ 0.93
LRFN3-201ENST00000246529 RABL6Q3YEC7 729 aaPredicted RBP20.87■□□□□ 0.93
LRFN3-201ENST00000246529 MAP4K1Q92918 833 aa20.87■□□□□ 0.93
LRFN3-201ENST00000246529 KCNB2Q92953 911 aa20.87■□□□□ 0.93
LRFN3-201ENST00000246529 CYP46A1Q9Y6A2 500 aa20.87■□□□□ 0.93
LRFN3-201ENST00000246529 LMBR1LQ6UX01 489 aa20.87■□□□□ 0.93
LRFN3-201ENST00000246529 CHMP3Q9Y3E7 222 aa20.87■□□□□ 0.93
LRFN3-201ENST00000246529 TPRNQ4KMQ1 711 aa20.86■□□□□ 0.93
LRFN3-201ENST00000246529 HIP1O00291 1037 aa20.86■□□□□ 0.93
LRFN3-201ENST00000246529 SLC27A2O14975 620 aa20.86■□□□□ 0.93
LRFN3-201ENST00000246529 VPS53Q5VIR6 699 aa20.86■□□□□ 0.93
LRFN3-201ENST00000246529 TCEANC2Q96MN5 208 aa20.86■□□□□ 0.93
LRFN3-201ENST00000246529 DBNDD2Q9BQY9 259 aa20.86■□□□□ 0.93
LRFN3-201ENST00000246529 PCDH11XQ9BZA7 1347 aa20.86■□□□□ 0.93
LRFN3-201ENST00000246529 PCDH11YQ9BZA8 1340 aa20.86■□□□□ 0.93
LRFN3-201ENST00000246529 STRN4Q9NRL3 753 aa20.86■□□□□ 0.93
LRFN3-201ENST00000246529 SMC3Q9UQE7 1217 aa20.86■□□□□ 0.93
LRFN3-201ENST00000246529 ZKSCAN1P17029 563 aaPredicted RBP20.85■□□□□ 0.93
LRFN3-201ENST00000246529 SYT1P21579 422 aa20.85■□□□□ 0.93
LRFN3-201ENST00000246529 USP48Q86UV5 1035 aa20.85■□□□□ 0.93
LRFN3-201ENST00000246529 ST3GAL1Q11201 340 aa20.85■□□□□ 0.93
LRFN3-201ENST00000246529 NECAB1Q8N987 351 aa20.85■□□□□ 0.93
LRFN3-201ENST00000246529 TRIM44Q96DX7 344 aaPredicted RBP20.85■□□□□ 0.93
LRFN3-201ENST00000246529 ANO8Q9HCE9 1232 aaPredicted RBP20.85■□□□□ 0.93
LRFN3-201ENST00000246529 DNAJC2Q99543 621 aaKnown RBP20.84■□□□□ 0.93
LRFN3-201ENST00000246529 ZBTB3Q9H5J0 574 aa20.84■□□□□ 0.93
LRFN3-201ENST00000246529 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.84■□□□□ 0.93
LRFN3-201ENST00000246529 ME3Q16798 604 aa20.84■□□□□ 0.93
LRFN3-201ENST00000246529 TM6SF1Q9BZW5 370 aa20.84■□□□□ 0.93
LRFN3-201ENST00000246529 ARFGEF2Q9Y6D5 1785 aa20.84■□□□□ 0.93
LRFN3-201ENST00000246529 STX6O43752 255 aa20.83■□□□□ 0.93
LRFN3-201ENST00000246529 MBD3O95983 291 aa20.83■□□□□ 0.93
LRFN3-201ENST00000246529 ZSCAN22P10073 491 aaPredicted RBP20.83■□□□□ 0.93
LRFN3-201ENST00000246529 FOXO4P98177 505 aa20.83■□□□□ 0.93
LRFN3-201ENST00000246529 CNPY2Q9Y2B0 182 aa20.83■□□□□ 0.93
LRFN3-201ENST00000246529 MED23Q9ULK4 1368 aa20.83■□□□□ 0.93
LRFN3-201ENST00000246529 ATP5JP18859 108 aa20.83■□□□□ 0.92
LRFN3-201ENST00000246529 SNRKQ9NRH2 765 aa20.83■□□□□ 0.92
LRFN3-201ENST00000246529 TPCN1Q9ULQ1 816 aa20.83■□□□□ 0.92
LRFN3-201ENST00000246529 AFDNP55196 1824 aaKnown RBP20.83■□□□□ 0.92
LRFN3-201ENST00000246529 GJB2P29033 226 aa20.82■□□□□ 0.92
LRFN3-201ENST00000246529 SLAIN2Q9P270 581 aa20.82■□□□□ 0.92
LRFN3-201ENST00000246529 PLEKHG2Q9H7P9 1386 aa20.82■□□□□ 0.92
LRFN3-201ENST00000246529 COL5A2P05997 1499 aaPredicted RBP20.82■□□□□ 0.92
LRFN3-201ENST00000246529 CCDC173Q0VFZ6 552 aa20.82■□□□□ 0.92
LRFN3-201ENST00000246529 LRSAM1Q6UWE0 723 aa20.82■□□□□ 0.92
LRFN3-201ENST00000246529 COL15A1P39059 1388 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms