RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 BMS1Q14692 1282 aaKnown RBP13.18□□□□□ -0.3
NIN-201ENST00000245441 CRACR2BQ8N4Y2 399 aaPredicted RBP13.18□□□□□ -0.3
NIN-201ENST00000245441 CTAGE1Q96RT6 745 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 PPP1R42Q7Z4L9 355 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 BIN1O00499 593 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 ZNF444Q8N0Y2 327 aaPredicted RBP13.18□□□□□ -0.3
NIN-201ENST00000245441 CUL5Q93034 780 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 NEK1Q96PY6 1258 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 MAP3K2Q9Y2U5 619 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
NIN-201ENST00000245441 TMEM67Q5HYA8 995 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 UBA5Q9GZZ9 404 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 MBIPQ9NS73 344 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 MICU3Q86XE3 530 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 PRDM10Q9NQV6 1147 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 KDM5BQ9UGL1 1544 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 NLRP5P59047 1200 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 MFSD6Q6ZSS7 791 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 CCDC82Q8N4S0 544 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 NCOA7Q8NI08 942 aa13.18□□□□□ -0.3
NIN-201ENST00000245441 GOLIM4O00461 696 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 PDE4BQ07343 736 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
NIN-201ENST00000245441 JADE2Q9NQC1 790 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 BMP15O95972 392 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 FANCAO15360 1455 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 UBA7P41226 1012 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 EHMT1Q9H9B1 1298 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 ARFGAP3Q9NP61 516 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 MPRIPQ6WCQ1 1025 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 FAM200AQ8TCP9 573 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 RMND1Q9NWS8 449 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 SYKP43405 635 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 TFIP11Q9UBB9 837 aaKnown RBP13.17□□□□□ -0.3
NIN-201ENST00000245441 KRT222Q8N1A0 295 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 CWC25Q9NXE8 425 aaPredicted RBP13.17□□□□□ -0.3
NIN-201ENST00000245441 UBE3BQ7Z3V4 1068 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
NIN-201ENST00000245441 CLCN1P35523 988 aa13.16□□□□□ -0.3
NIN-201ENST00000245441 IFI16Q16666 785 aaKnown RBP13.16□□□□□ -0.3
NIN-201ENST00000245441 SNX21Q969T3 373 aa13.16□□□□□ -0.3
NIN-201ENST00000245441 TMX3Q96JJ7 454 aa13.16□□□□□ -0.3
NIN-201ENST00000245441 SPECC1LQ69YQ0 1117 aa13.16□□□□□ -0.3
NIN-201ENST00000245441 TTC21AQ8NDW8 1320 aa13.16□□□□□ -0.3
NIN-201ENST00000245441 ORC3Q9UBD5 711 aaPredicted RBP13.16□□□□□ -0.3
NIN-201ENST00000245441 IGHDP01880 384 aa13.16□□□□□ -0.3
NIN-201ENST00000245441 TUBB4AP04350 444 aa13.16□□□□□ -0.3
NIN-201ENST00000245441 TUBB4BP68371 445 aa13.16□□□□□ -0.3
NIN-201ENST00000245441 HS1BP3Q53T59 392 aa13.16□□□□□ -0.3
NIN-201ENST00000245441 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
NIN-201ENST00000245441 SDSP20132 328 aa13.16□□□□□ -0.3
NIN-201ENST00000245441 GNG11P61952 73 aa13.16□□□□□ -0.3
NIN-201ENST00000245441 TRMT112Q9UI30 125 aaKnown RBP13.16□□□□□ -0.3
NIN-201ENST00000245441 RBM27Q9P2N5 1060 aaKnown RBP13.15□□□□□ -0.3
NIN-201ENST00000245441 ARHGEF12Q9NZN5 1544 aa13.15□□□□□ -0.3
NIN-201ENST00000245441 CKAP4Q07065 602 aaKnown RBP13.15□□□□□ -0.3
NIN-201ENST00000245441 CCDC96Q2M329 555 aa13.15□□□□□ -0.3
NIN-201ENST00000245441 LRRC27Q9C0I9 530 aa13.15□□□□□ -0.3
NIN-201ENST00000245441 MACROD2A1Z1Q3 448 aa13.15□□□□□ -0.3
NIN-201ENST00000245441 UBASH3AP57075 661 aa13.15□□□□□ -0.3
NIN-201ENST00000245441 BICDL1Q6ZP65 573 aa13.15□□□□□ -0.3
NIN-201ENST00000245441 ADGRF5Q8IZF2 1346 aa13.15□□□□□ -0.3
NIN-201ENST00000245441 STAMBPO95630 424 aa13.15□□□□□ -0.3
NIN-201ENST00000245441 NF2P35240 595 aa13.15□□□□□ -0.3
NIN-201ENST00000245441 DNA2P51530 1060 aa13.15□□□□□ -0.3
NIN-201ENST00000245441 GIGYF2Q6Y7W6 1299 aaKnown RBP13.15□□□□□ -0.3
NIN-201ENST00000245441 CTNNBL1Q8WYA6 563 aaPredicted RBP13.15□□□□□ -0.3
NIN-201ENST00000245441 BCCIPQ9P287 314 aaKnown RBP eCLIP13.15□□□□□ -0.3
NIN-201ENST00000245441 RBM25P49756 843 aaKnown RBP13.15□□□□□ -0.31
NIN-201ENST00000245441 CPLX3Q8WVH0 158 aa13.15□□□□□ -0.31
NIN-201ENST00000245441 CCDC172P0C7W6 258 aa13.14□□□□□ -0.31
NIN-201ENST00000245441 PLVAPQ9BX97 442 aa13.14□□□□□ -0.31
NIN-201ENST00000245441 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.14□□□□□ -0.31
NIN-201ENST00000245441 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
NIN-201ENST00000245441 CEP112Q8N8E3 955 aa13.14□□□□□ -0.31
NIN-201ENST00000245441 TEX13AQ9BXU3 409 aaPredicted RBP13.14□□□□□ -0.31
NIN-201ENST00000245441 PI4KAP2A4QPH2 592 aa13.14□□□□□ -0.31
NIN-201ENST00000245441 PI4KAP1Q8N8J0 262 aa13.14□□□□□ -0.31
NIN-201ENST00000245441 KIF1BO60333 1816 aa13.14□□□□□ -0.31
NIN-201ENST00000245441 ANO6Q4KMQ2 910 aa13.14□□□□□ -0.31
NIN-201ENST00000245441 GIMAP6Q6P9H5 292 aa13.14□□□□□ -0.31
NIN-201ENST00000245441 DDX12PQ92771 950 aa13.14□□□□□ -0.31
NIN-201ENST00000245441 CDC5LQ99459 802 aaKnown RBP13.14□□□□□ -0.31
NIN-201ENST00000245441 SRRTQ9BXP5 876 aaKnown RBP13.14□□□□□ -0.31
NIN-201ENST00000245441 PARD3Q8TEW0 1356 aa13.14□□□□□ -0.31
NIN-201ENST00000245441 BAG3O95817 575 aa13.14□□□□□ -0.31
NIN-201ENST00000245441 CCDC40Q4G0X9 1142 aa13.14□□□□□ -0.31
NIN-201ENST00000245441 RNF187Q5TA31 235 aaPredicted RBP13.14□□□□□ -0.31
NIN-201ENST00000245441 PPP1R1BQ9UD71 204 aaPredicted RBP13.14□□□□□ -0.31
NIN-201ENST00000245441 GTF2F1P35269 517 aaKnown RBP eCLIP13.13□□□□□ -0.31
NIN-201ENST00000245441 N4BP3O15049 544 aa13.13□□□□□ -0.31
NIN-201ENST00000245441 CTNNA2P26232 953 aa13.13□□□□□ -0.31
NIN-201ENST00000245441 SF3B2Q13435 895 aaKnown RBP13.13□□□□□ -0.31
NIN-201ENST00000245441 EXOC1Q9NV70 894 aa13.13□□□□□ -0.31
NIN-201ENST00000245441 LMAN1P49257 510 aa13.13□□□□□ -0.31
NIN-201ENST00000245441 USHBP1Q8N6Y0 703 aa13.13□□□□□ -0.31
NIN-201ENST00000245441 SKILP12757 684 aa13.13□□□□□ -0.31
NIN-201ENST00000245441 TMTC2Q8N394 836 aa13.13□□□□□ -0.31
NIN-201ENST00000245441 LARP6Q9BRS8 491 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms