RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 NUTM1Q86Y26 1132 aa22.11■■□□□ 1.13
KLHDC3-201ENST00000244670 SIL1Q9H173 461 aa22.11■■□□□ 1.13
KLHDC3-201ENST00000244670 RREB1Q92766 1687 aa22.11■■□□□ 1.13
KLHDC3-201ENST00000244670 SBF2Q86WG5 1849 aa22.1■■□□□ 1.13
KLHDC3-201ENST00000244670 ANKRD36CQ5JPF3 1778 aa22.1■■□□□ 1.13
KLHDC3-201ENST00000244670 MX1P20591 662 aa22.1■■□□□ 1.13
KLHDC3-201ENST00000244670 EIF5P55010 431 aaKnown RBP22.1■■□□□ 1.13
KLHDC3-201ENST00000244670 TUBGCP6Q96RT7 1819 aa22.1■■□□□ 1.13
KLHDC3-201ENST00000244670 COL15A1P39059 1388 aa22.1■■□□□ 1.13
KLHDC3-201ENST00000244670 MFAP1P55081 439 aaKnown RBP22.1■■□□□ 1.13
KLHDC3-201ENST00000244670 RABL6Q3YEC7 729 aaPredicted RBP22.1■■□□□ 1.13
KLHDC3-201ENST00000244670 LINC00116Q8NCU8 138 aa22.09■■□□□ 1.13
KLHDC3-201ENST00000244670 CHMP3Q9Y3E7 222 aa22.09■■□□□ 1.13
KLHDC3-201ENST00000244670 FOXO4P98177 505 aa22.08■■□□□ 1.13
KLHDC3-201ENST00000244670 LMBR1LQ6UX01 489 aa22.08■■□□□ 1.13
KLHDC3-201ENST00000244670 OSBPL3Q9H4L5 887 aa22.08■■□□□ 1.13
KLHDC3-201ENST00000244670 ZNF831Q5JPB2 1677 aa22.08■■□□□ 1.12
KLHDC3-201ENST00000244670 G3BP1Q13283 466 aaKnown RBP eCLIP22.08■■□□□ 1.12
KLHDC3-201ENST00000244670 SLC4A3P48751 1232 aa22.07■■□□□ 1.12
KLHDC3-201ENST00000244670 TRIM28Q13263 835 aaKnown RBP22.07■■□□□ 1.12
KLHDC3-201ENST00000244670 SDSP20132 328 aa22.06■■□□□ 1.12
KLHDC3-201ENST00000244670 RFX5P48382 616 aaPredicted RBP22.06■■□□□ 1.12
KLHDC3-201ENST00000244670 HSP90AB3PQ58FF7 597 aa22.06■■□□□ 1.12
KLHDC3-201ENST00000244670 TBC1D9Q6ZT07 1266 aa22.06■■□□□ 1.12
KLHDC3-201ENST00000244670 ERC1Q8IUD2 1116 aa22.06■■□□□ 1.12
KLHDC3-201ENST00000244670 FAM89AQ96GI7 184 aa22.06■■□□□ 1.12
KLHDC3-201ENST00000244670 BRWD3Q6RI45 1802 aa22.06■■□□□ 1.12
KLHDC3-201ENST00000244670 ERVV-1B6SEH8 477 aa22.06■■□□□ 1.12
KLHDC3-201ENST00000244670 NLRP10Q86W26 655 aa22.06■■□□□ 1.12
KLHDC3-201ENST00000244670 CDC45O75419 566 aa22.05■■□□□ 1.12
KLHDC3-201ENST00000244670 SASH1O94885 1247 aa22.05■■□□□ 1.12
KLHDC3-201ENST00000244670 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.05■■□□□ 1.12
KLHDC3-201ENST00000244670 PTPN12Q05209 780 aaKnown RBP22.04■■□□□ 1.12
KLHDC3-201ENST00000244670 PCCAP05165 728 aaPredicted RBP22.04■■□□□ 1.12
KLHDC3-201ENST00000244670 SYNE4Q8N205 404 aa22.04■■□□□ 1.12
KLHDC3-201ENST00000244670 C22orf23Q9BZE7 217 aa22.04■■□□□ 1.12
KLHDC3-201ENST00000244670 COPRSQ9NQ92 184 aa22.04■■□□□ 1.12
KLHDC3-201ENST00000244670 STAP2Q9UGK3 403 aa22.04■■□□□ 1.12
KLHDC3-201ENST00000244670 CLASRPQ8N2M8 674 aaKnown RBP22.03■■□□□ 1.12
KLHDC3-201ENST00000244670 ZBTB38Q8NAP3 1195 aaPredicted RBP22.03■■□□□ 1.12
KLHDC3-201ENST00000244670 CCNL1Q9UK58 526 aaPredicted RBP22.02■■□□□ 1.12
KLHDC3-201ENST00000244670 EP400Q96L91 3159 aa22.02■■□□□ 1.12
KLHDC3-201ENST00000244670 UBN2Q6ZU65 1347 aa22.02■■□□□ 1.12
KLHDC3-201ENST00000244670 CAMTA2O94983 1202 aa22.02■■□□□ 1.11
KLHDC3-201ENST00000244670 SMIM5Q71RC9 77 aa22.01■■□□□ 1.11
KLHDC3-201ENST00000244670 AACSQ86V21 672 aa22.01■■□□□ 1.11
KLHDC3-201ENST00000244670 CCDC85AQ96PX6 553 aaPredicted RBP22.01■■□□□ 1.11
KLHDC3-201ENST00000244670 LY75O60449 1722 aa22.01■■□□□ 1.11
KLHDC3-201ENST00000244670 ZNF34Q8IZ26 560 aa22■■□□□ 1.11
KLHDC3-201ENST00000244670 TRMT112Q9UI30 125 aaKnown RBP22■■□□□ 1.11
KLHDC3-201ENST00000244670 FAM177BA6PVY3 158 aa21.99■■□□□ 1.11
KLHDC3-201ENST00000244670 TRIM6-TRIM34B2RNG4 842 aa21.99■■□□□ 1.11
KLHDC3-201ENST00000244670 IFIT2P09913 472 aaKnown RBP21.99■■□□□ 1.11
KLHDC3-201ENST00000244670 KRT27Q7Z3Y8 459 aa21.99■■□□□ 1.11
KLHDC3-201ENST00000244670 AOX1Q06278 1338 aa21.99■■□□□ 1.11
KLHDC3-201ENST00000244670 CNTNAP4Q9C0A0 1308 aa21.99■■□□□ 1.11
KLHDC3-201ENST00000244670 NBR1Q14596 966 aa21.98■■□□□ 1.11
KLHDC3-201ENST00000244670 PI4K2BQ8TCG2 481 aa21.98■■□□□ 1.11
KLHDC3-201ENST00000244670 RILPL2Q969X0 211 aa21.98■■□□□ 1.11
KLHDC3-201ENST00000244670 EAF2Q96CJ1 260 aaPredicted RBP21.98■■□□□ 1.11
KLHDC3-201ENST00000244670 ZNF594Q96JF6 807 aaPredicted RBP21.98■■□□□ 1.11
KLHDC3-201ENST00000244670 DAXXQ9UER7 740 aaPredicted RBP21.98■■□□□ 1.11
KLHDC3-201ENST00000244670 BCORQ6W2J9 1755 aa21.98■■□□□ 1.11
KLHDC3-201ENST00000244670 MAP4K4O95819 1239 aaPredicted RBP21.98■■□□□ 1.11
KLHDC3-201ENST00000244670 CCDC8Q9H0W5 538 aaPredicted RBP21.98■■□□□ 1.11
KLHDC3-201ENST00000244670 CDHR2Q9BYE9 1310 aa21.98■■□□□ 1.11
KLHDC3-201ENST00000244670 TAF1LQ8IZX4 1826 aa21.98■■□□□ 1.11
KLHDC3-201ENST00000244670 TFCP2Q12800 502 aa21.97■■□□□ 1.11
KLHDC3-201ENST00000244670 ZNF772Q68DY9 489 aaPredicted RBP21.97■■□□□ 1.11
KLHDC3-201ENST00000244670 BCL11BQ9C0K0 894 aaPredicted RBP21.97■■□□□ 1.11
KLHDC3-201ENST00000244670 MYH3P11055 1940 aa21.97■■□□□ 1.11
KLHDC3-201ENST00000244670 AK9Q5TCS8 1911 aa21.97■■□□□ 1.11
KLHDC3-201ENST00000244670 PLA2G12BQ9BX93 195 aa21.96■■□□□ 1.11
KLHDC3-201ENST00000244670 TLR7Q9NYK1 1049 aaKnown RBP21.96■■□□□ 1.11
KLHDC3-201ENST00000244670 IRS4O14654 1257 aaPredicted RBP21.96■■□□□ 1.11
KLHDC3-201ENST00000244670 RBM25P49756 843 aaKnown RBP21.96■■□□□ 1.11
KLHDC3-201ENST00000244670 SUSD4Q5VX71 490 aa21.96■■□□□ 1.11
KLHDC3-201ENST00000244670 GNPATO15228 680 aa21.95■■□□□ 1.1
KLHDC3-201ENST00000244670 FAM196AQ6ZSG2 479 aa21.95■■□□□ 1.1
KLHDC3-201ENST00000244670 NIP7Q9Y221 180 aaKnown RBP eCLIP21.95■■□□□ 1.1
KLHDC3-201ENST00000244670 TTC41PQ6P2S7 1318 aa21.94■■□□□ 1.1
KLHDC3-201ENST00000244670 USP42Q9H9J4 1324 aaKnown RBP21.94■■□□□ 1.1
KLHDC3-201ENST00000244670 RBM6P78332 1123 aaKnown RBP21.94■■□□□ 1.1
KLHDC3-201ENST00000244670 CCDC57Q2TAC2 916 aa21.94■■□□□ 1.1
KLHDC3-201ENST00000244670 CASC1Q6TDU7 716 aa21.94■■□□□ 1.1
KLHDC3-201ENST00000244670 LRRC24Q50LG9 513 aa21.94■■□□□ 1.1
KLHDC3-201ENST00000244670 ATG9AQ7Z3C6 839 aa21.94■■□□□ 1.1
KLHDC3-201ENST00000244670 ECHDC1Q9NTX5 307 aa21.94■■□□□ 1.1
KLHDC3-201ENST00000244670 TRIM37O94972 964 aa21.93■■□□□ 1.1
KLHDC3-201ENST00000244670 CSF1RP07333 972 aa21.93■■□□□ 1.1
KLHDC3-201ENST00000244670 RC3H1Q5TC82 1133 aaKnown RBP21.93■■□□□ 1.1
KLHDC3-201ENST00000244670 GPATCH3Q96I76 525 aa21.93■■□□□ 1.1
KLHDC3-201ENST00000244670 TNNI3KQ59H18 835 aa21.92■■□□□ 1.1
KLHDC3-201ENST00000244670 PUS3Q9BZE2 481 aaKnown RBP21.92■■□□□ 1.1
KLHDC3-201ENST00000244670 ZNF652Q9Y2D9 606 aa21.92■■□□□ 1.1
KLHDC3-201ENST00000244670 FPGT-TNNI3KV9GXZ4 949 aa21.92■■□□□ 1.1
KLHDC3-201ENST00000244670 C4BP0C0L5 1744 aa21.92■■□□□ 1.1
KLHDC3-201ENST00000244670 RPS6KA4O75676 772 aa21.92■■□□□ 1.1
KLHDC3-201ENST00000244670 CTSWP56202 376 aa21.92■■□□□ 1.1
KLHDC3-201ENST00000244670 BECN1Q14457 450 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms