RNA–Protein interactions for RNA: ENST00000239165.8

HOXB7-201, Transcript of homeobox B7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB7, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB7-201ENST00000239165 DNAAF4Q8WXU2 420 aa28.26■■■□□ 2.12
HOXB7-201ENST00000239165 ISCA1Q9BUE6 129 aa28.25■■■□□ 2.11
HOXB7-201ENST00000239165 ANKRD36CQ5JPF3 1778 aa28.25■■■□□ 2.11
HOXB7-201ENST00000239165 PRR5LQ6MZQ0 368 aa28.24■■■□□ 2.11
HOXB7-201ENST00000239165 SETDB2Q96T68 719 aa28.24■■■□□ 2.11
HOXB7-201ENST00000239165 IPO8O15397 1037 aaKnown RBP28.24■■■□□ 2.11
HOXB7-201ENST00000239165 API5Q9BZZ5 524 aaKnown RBP28.24■■■□□ 2.11
HOXB7-201ENST00000239165 GPBP1L1Q9HC44 474 aaPredicted RBP28.24■■■□□ 2.11
HOXB7-201ENST00000239165 UBN2Q6ZU65 1347 aa28.23■■■□□ 2.11
HOXB7-201ENST00000239165 C2CD5Q86YS7 1000 aa28.23■■■□□ 2.11
HOXB7-201ENST00000239165 BRIP1Q9BX63 1249 aa28.23■■■□□ 2.11
HOXB7-201ENST00000239165 NIP7Q9Y221 180 aaKnown RBP eCLIP28.23■■■□□ 2.11
HOXB7-201ENST00000239165 IBTKQ9P2D0 1353 aaPredicted RBP28.22■■■□□ 2.11
HOXB7-201ENST00000239165 F6X3S4 739 aa28.22■■■□□ 2.11
HOXB7-201ENST00000239165 PARP10Q53GL7 1025 aa28.22■■■□□ 2.11
HOXB7-201ENST00000239165 ATF7IPQ6VMQ6 1270 aa28.22■■■□□ 2.11
HOXB7-201ENST00000239165 H0YIN7 160 aa28.21■■■□□ 2.11
HOXB7-201ENST00000239165 ZNF526Q8TF50 670 aaPredicted RBP28.21■■■□□ 2.11
HOXB7-201ENST00000239165 SBF1O95248 1867 aa28.2■■■□□ 2.11
HOXB7-201ENST00000239165 IGKV5-2P06315 115 aa28.2■■■□□ 2.1
HOXB7-201ENST00000239165 TRIM27P14373 513 aa28.2■■■□□ 2.1
HOXB7-201ENST00000239165 BEND3Q5T5X7 828 aa28.2■■■□□ 2.1
HOXB7-201ENST00000239165 ZKSCAN2Q63HK3 967 aa28.2■■■□□ 2.1
HOXB7-201ENST00000239165 NLRP10Q86W26 655 aa28.2■■■□□ 2.1
HOXB7-201ENST00000239165 LINS1Q8NG48 757 aa28.2■■■□□ 2.1
HOXB7-201ENST00000239165 MYD88Q99836 296 aa28.2■■■□□ 2.1
HOXB7-201ENST00000239165 PDE6BP35913 854 aa28.19■■■□□ 2.1
HOXB7-201ENST00000239165 NEXNQ0ZGT2 675 aa28.19■■■□□ 2.1
HOXB7-201ENST00000239165 CCDC24Q8N4L8 307 aa28.19■■■□□ 2.1
HOXB7-201ENST00000239165 TTLL6Q8N841 843 aa28.19■■■□□ 2.1
HOXB7-201ENST00000239165 PDZRN3Q9UPQ7 1066 aa28.19■■■□□ 2.1
HOXB7-201ENST00000239165 ABCC4O15439 1325 aa28.19■■■□□ 2.1
HOXB7-201ENST00000239165 GPTP24298 496 aa28.18■■■□□ 2.1
HOXB7-201ENST00000239165 CNBD1Q8NA66 436 aa28.18■■■□□ 2.1
HOXB7-201ENST00000239165 CCDC191Q8NCU4 936 aa28.18■■■□□ 2.1
HOXB7-201ENST00000239165 FRAT1Q92837 279 aaPredicted RBP28.18■■■□□ 2.1
HOXB7-201ENST00000239165 COL11A2P13942 1736 aaPredicted RBP28.18■■■□□ 2.1
HOXB7-201ENST00000239165 ATP5J2-PTCD1G3V325 749 aa28.17■■■□□ 2.1
HOXB7-201ENST00000239165 C9orf131Q5VYM1 1079 aa28.17■■■□□ 2.1
HOXB7-201ENST00000239165 NEURL1BA8MQ27 555 aa28.16■■■□□ 2.1
HOXB7-201ENST00000239165 RNF123Q5XPI4 1314 aa28.16■■■□□ 2.1
HOXB7-201ENST00000239165 SUSD4Q5VX71 490 aa28.15■■■□□ 2.1
HOXB7-201ENST00000239165 ALDH1L1O75891 902 aa28.14■■■□□ 2.1
HOXB7-201ENST00000239165 NTSR2O95665 410 aa28.14■■■□□ 2.1
HOXB7-201ENST00000239165 ST5P78524 1137 aa28.14■■■□□ 2.1
HOXB7-201ENST00000239165 CWF19L2Q2TBE0 894 aaKnown RBP28.13■■■□□ 2.09
HOXB7-201ENST00000239165 PPP1R42Q7Z4L9 355 aa28.13■■■□□ 2.09
HOXB7-201ENST00000239165 CWC25Q9NXE8 425 aaPredicted RBP28.13■■■□□ 2.09
HOXB7-201ENST00000239165 NPHP1O15259 732 aa28.12■■■□□ 2.09
HOXB7-201ENST00000239165 INTS3Q68E01 1043 aaKnown RBP28.12■■■□□ 2.09
HOXB7-201ENST00000239165 SLC4A10Q6U841 1118 aa28.12■■■□□ 2.09
HOXB7-201ENST00000239165 NBPF5PQ86XG9 351 aaPredicted RBP28.12■■■□□ 2.09
HOXB7-201ENST00000239165 SRCIN1Q9C0H9 1055 aa28.12■■■□□ 2.09
HOXB7-201ENST00000239165 NYXQ9GZU5 481 aa28.12■■■□□ 2.09
HOXB7-201ENST00000239165 TNNQ9UQP3 1299 aa28.12■■■□□ 2.09
HOXB7-201ENST00000239165 CCT4P50991 539 aaKnown RBP28.11■■■□□ 2.09
HOXB7-201ENST00000239165 GCKRQ14397 625 aa28.11■■■□□ 2.09
HOXB7-201ENST00000239165 TPTE2Q6XPS3 522 aa28.11■■■□□ 2.09
HOXB7-201ENST00000239165 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.11■■■□□ 2.09
HOXB7-201ENST00000239165 ZNF622Q969S3 477 aaKnown RBP eCLIP28.11■■■□□ 2.09
HOXB7-201ENST00000239165 UTP14AQ9BVJ6 771 aaKnown RBP28.11■■■□□ 2.09
HOXB7-201ENST00000239165 RNF181Q9P0P0 153 aa28.11■■■□□ 2.09
HOXB7-201ENST00000239165 RIC1Q4ADV7 1423 aa28.1■■■□□ 2.09
HOXB7-201ENST00000239165 KIF3CO14782 793 aa28.1■■■□□ 2.09
HOXB7-201ENST00000239165 SRGNP10124 158 aa28.1■■■□□ 2.09
HOXB7-201ENST00000239165 DZIP1LQ8IYY4 767 aaKnown RBP28.1■■■□□ 2.09
HOXB7-201ENST00000239165 PCCAP05165 728 aaPredicted RBP28.09■■■□□ 2.09
HOXB7-201ENST00000239165 MS4A1P11836 297 aa28.09■■■□□ 2.09
HOXB7-201ENST00000239165 RASSF7Q02833 373 aa28.09■■■□□ 2.09
HOXB7-201ENST00000239165 ZBTB38Q8NAP3 1195 aaPredicted RBP28.09■■■□□ 2.09
HOXB7-201ENST00000239165 CCDC88AQ3V6T2 1871 aa28.08■■■□□ 2.09
HOXB7-201ENST00000239165 RRP1P56182 461 aaKnown RBP28.08■■■□□ 2.09
HOXB7-201ENST00000239165 STYK1Q6J9G0 422 aa28.08■■■□□ 2.09
HOXB7-201ENST00000239165 TRMT112Q9UI30 125 aaKnown RBP28.08■■■□□ 2.09
HOXB7-201ENST00000239165 SH3TC1Q8TE82 1336 aa28.07■■■□□ 2.08
HOXB7-201ENST00000239165 SLX4Q8IY92 1834 aa28.07■■■□□ 2.08
HOXB7-201ENST00000239165 H7C1W4 665 aa28.07■■■□□ 2.08
HOXB7-201ENST00000239165 PLIN1O60240 522 aa28.07■■■□□ 2.08
HOXB7-201ENST00000239165 RLBP1P12271 317 aa28.07■■■□□ 2.08
HOXB7-201ENST00000239165 PRELPP51888 382 aa28.07■■■□□ 2.08
HOXB7-201ENST00000239165 PDE3AQ14432 1141 aa28.07■■■□□ 2.08
HOXB7-201ENST00000239165 SLC10A5Q5PT55 438 aa28.07■■■□□ 2.08
HOXB7-201ENST00000239165 CLUAP1Q96AJ1 413 aa28.07■■■□□ 2.08
HOXB7-201ENST00000239165 CACNA1SQ13698 1873 aa28.07■■■□□ 2.08
HOXB7-201ENST00000239165 UTYO14607 1347 aa28.06■■■□□ 2.08
HOXB7-201ENST00000239165 KLRG2A4D1S0 409 aaPredicted RBP28.06■■■□□ 2.08
HOXB7-201ENST00000239165 CNKSR1Q969H4 720 aa28.06■■■□□ 2.08
HOXB7-201ENST00000239165 MASTLQ96GX5 879 aa28.06■■■□□ 2.08
HOXB7-201ENST00000239165 FER1L6Q2WGJ9 1857 aa28.05■■■□□ 2.08
HOXB7-201ENST00000239165 CASP7P55210 303 aa28.05■■■□□ 2.08
HOXB7-201ENST00000239165 FTSJ3Q8IY81 847 aaKnown RBP28.05■■■□□ 2.08
HOXB7-201ENST00000239165 ABCC12Q96J65 1359 aa28.05■■■□□ 2.08
HOXB7-201ENST00000239165 CDHR2Q9BYE9 1310 aa28.04■■■□□ 2.08
HOXB7-201ENST00000239165 FAM177BA6PVY3 158 aa28.04■■■□□ 2.08
HOXB7-201ENST00000239165 NFKBIEO00221 500 aa28.04■■■□□ 2.08
HOXB7-201ENST00000239165 C21orf2O43822 256 aa28.04■■■□□ 2.08
HOXB7-201ENST00000239165 LMNB1P20700 586 aa28.04■■■□□ 2.08
HOXB7-201ENST00000239165 ERFEQ4G0M1 354 aa28.04■■■□□ 2.08
HOXB7-201ENST00000239165 NUTM1Q86Y26 1132 aa28.04■■■□□ 2.08
HOXB7-201ENST00000239165 TMEM57Q8N5G2 664 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms