RNA–Protein interactions for RNA: ENST00000233330.6

RTKN-201, Transcript of rhotekin, humanhuman

TSL 1 (best) BASIC

Gene RTKN, Length 2,220 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-201ENST00000233330 SNX14Q9Y5W7 946 aa23.85■■□□□ 1.41
RTKN-201ENST00000233330 COL14A1Q05707 1796 aaKnown RBP23.84■■□□□ 1.41
RTKN-201ENST00000233330 H7C1W4 665 aa23.84■■□□□ 1.41
RTKN-201ENST00000233330 BTG4Q9NY30 223 aa23.84■■□□□ 1.41
RTKN-201ENST00000233330 SKOR2Q2VWA4 1001 aaPredicted RBP23.83■■□□□ 1.41
RTKN-201ENST00000233330 TMOD3Q9NYL9 352 aa23.83■■□□□ 1.41
RTKN-201ENST00000233330 ITGB4P16144 1822 aa23.83■■□□□ 1.41
RTKN-201ENST00000233330 GOLGA6L22H0YM25 854 aa23.83■■□□□ 1.4
RTKN-201ENST00000233330 CWC25Q9NXE8 425 aaPredicted RBP23.83■■□□□ 1.4
RTKN-201ENST00000233330 HIP1O00291 1037 aa23.82■■□□□ 1.4
RTKN-201ENST00000233330 L1TD1Q5T7N2 865 aaKnown RBP23.82■■□□□ 1.4
RTKN-201ENST00000233330 RASEFQ8IZ41 740 aa23.82■■□□□ 1.4
RTKN-201ENST00000233330 INTS4Q96HW7 963 aaKnown RBP23.82■■□□□ 1.4
RTKN-201ENST00000233330 BOLA2Q9H3K6 86 aa23.82■■□□□ 1.4
RTKN-201ENST00000233330 FSD2A1L4K1 749 aa23.81■■□□□ 1.4
RTKN-201ENST00000233330 FOXO4P98177 505 aa23.81■■□□□ 1.4
RTKN-201ENST00000233330 BRPF3Q9ULD4 1205 aa23.81■■□□□ 1.4
RTKN-201ENST00000233330 ZDHHC9Q9Y397 364 aa23.81■■□□□ 1.4
RTKN-201ENST00000233330 ROBO1Q9Y6N7 1651 aa23.81■■□□□ 1.4
RTKN-201ENST00000233330 PTH1RQ03431 593 aa23.8■■□□□ 1.4
RTKN-201ENST00000233330 TFCP2Q12800 502 aa23.8■■□□□ 1.4
RTKN-201ENST00000233330 TNNI3KQ59H18 835 aa23.8■■□□□ 1.4
RTKN-201ENST00000233330 LMBR1LQ6UX01 489 aa23.8■■□□□ 1.4
RTKN-201ENST00000233330 NOL8Q76FK4 1167 aaKnown RBP23.8■■□□□ 1.4
RTKN-201ENST00000233330 ZBTB3Q9H5J0 574 aa23.8■■□□□ 1.4
RTKN-201ENST00000233330 FPGT-TNNI3KV9GXZ4 949 aa23.8■■□□□ 1.4
RTKN-201ENST00000233330 DISP2A7MBM2 1401 aa23.8■■□□□ 1.4
RTKN-201ENST00000233330 CCDC191Q8NCU4 936 aa23.79■■□□□ 1.4
RTKN-201ENST00000233330 DBNLQ9UJU6 430 aaKnown RBP23.79■■□□□ 1.4
RTKN-201ENST00000233330 COL22A1Q8NFW1 1626 aaPredicted RBP23.79■■□□□ 1.4
RTKN-201ENST00000233330 TTC14Q96N46 770 aa23.79■■□□□ 1.4
RTKN-201ENST00000233330 PLCH1Q4KWH8 1693 aa23.79■■□□□ 1.4
RTKN-201ENST00000233330 GOLGA6L3A6NEY3 463 aa23.78■■□□□ 1.4
RTKN-201ENST00000233330 SNRKQ9NRH2 765 aa23.78■■□□□ 1.4
RTKN-201ENST00000233330 COL16A1Q07092 1604 aaPredicted RBP23.78■■□□□ 1.4
RTKN-201ENST00000233330 CCDC171Q6TFL3 1326 aa23.78■■□□□ 1.4
RTKN-201ENST00000233330 NMIQ13287 307 aaPredicted RBP23.78■■□□□ 1.4
RTKN-201ENST00000233330 PIGBQ92521 554 aa23.78■■□□□ 1.4
RTKN-201ENST00000233330 FAM227BQ96M60 508 aa23.78■■□□□ 1.4
RTKN-201ENST00000233330 KCNB2Q92953 911 aa23.77■■□□□ 1.4
RTKN-201ENST00000233330 FSD1Q9BTV5 496 aa23.77■■□□□ 1.4
RTKN-201ENST00000233330 AHDC1Q5TGY3 1603 aaPredicted RBP23.77■■□□□ 1.4
RTKN-201ENST00000233330 ATP5JP18859 108 aa23.76■■□□□ 1.39
RTKN-201ENST00000233330 VSIG10Q8N0Z9 540 aa23.76■■□□□ 1.39
RTKN-201ENST00000233330 ASAP1Q9ULH1 1129 aa23.76■■□□□ 1.39
RTKN-201ENST00000233330 MCTP1Q6DN14 999 aa23.75■■□□□ 1.39
RTKN-201ENST00000233330 CHMP3Q9Y3E7 222 aa23.75■■□□□ 1.39
RTKN-201ENST00000233330 WNK3Q9BYP7 1800 aa23.75■■□□□ 1.39
RTKN-201ENST00000233330 NECTIN1Q15223 517 aa23.75■■□□□ 1.39
RTKN-201ENST00000233330 TEX13AQ9BXU3 409 aaPredicted RBP23.75■■□□□ 1.39
RTKN-201ENST00000233330 A0A0D9SFI3 127 aa23.74■■□□□ 1.39
RTKN-201ENST00000233330 PRPF40BQ6NWY9 871 aaKnown RBP23.74■■□□□ 1.39
RTKN-201ENST00000233330 ATG3Q9NT62 314 aa23.74■■□□□ 1.39
RTKN-201ENST00000233330 LRP6O75581 1613 aa23.74■■□□□ 1.39
RTKN-201ENST00000233330 MED23Q9ULK4 1368 aa23.74■■□□□ 1.39
RTKN-201ENST00000233330 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.74■■□□□ 1.39
RTKN-201ENST00000233330 DNAJC10Q8IXB1 793 aa23.74■■□□□ 1.39
RTKN-201ENST00000233330 MAP4K1Q92918 833 aa23.74■■□□□ 1.39
RTKN-201ENST00000233330 ISCA1Q9BUE6 129 aa23.74■■□□□ 1.39
RTKN-201ENST00000233330 AK2P54819 239 aa23.73■■□□□ 1.39
RTKN-201ENST00000233330 KLHL40Q2TBA0 621 aa23.73■■□□□ 1.39
RTKN-201ENST00000233330 BRD1O95696 1058 aa23.72■■□□□ 1.39
RTKN-201ENST00000233330 CASTP20810 708 aaKnown RBP23.72■■□□□ 1.39
RTKN-201ENST00000233330 ATG9AQ7Z3C6 839 aa23.72■■□□□ 1.39
RTKN-201ENST00000233330 DBNDD2Q9BQY9 259 aa23.72■■□□□ 1.39
RTKN-201ENST00000233330 RBM8AQ9Y5S9 174 aaKnown RBP23.72■■□□□ 1.39
RTKN-201ENST00000233330 TCIRG1Q13488 830 aa23.72■■□□□ 1.39
RTKN-201ENST00000233330 EDC3Q96F86 508 aaKnown RBP23.72■■□□□ 1.39
RTKN-201ENST00000233330 TM6SF1Q9BZW5 370 aa23.72■■□□□ 1.39
RTKN-201ENST00000233330 LMBRD1Q9NUN5 540 aa23.71■■□□□ 1.39
RTKN-201ENST00000233330 ISY1Q9ULR0 285 aaKnown RBP23.71■■□□□ 1.39
RTKN-201ENST00000233330 BCL9O00512 1426 aa23.71■■□□□ 1.39
RTKN-201ENST00000233330 ADCK5Q3MIX3 580 aa23.71■■□□□ 1.39
RTKN-201ENST00000233330 DDX49Q9Y6V7 483 aaKnown RBP23.71■■□□□ 1.39
RTKN-201ENST00000233330 RFX7Q2KHR2 1363 aa23.7■■□□□ 1.39
RTKN-201ENST00000233330 JCADQ9P266 1359 aa23.7■■□□□ 1.39
RTKN-201ENST00000233330 XRCC6P12956 609 aaKnown RBP eCLIP23.7■■□□□ 1.38
RTKN-201ENST00000233330 RUFY3Q7L099 469 aa23.7■■□□□ 1.38
RTKN-201ENST00000233330 JAKMIP1Q96N16 626 aaKnown RBP23.7■■□□□ 1.38
RTKN-201ENST00000233330 ZSWIM6Q9HCJ5 1215 aa23.7■■□□□ 1.38
RTKN-201ENST00000233330 LIMCH1Q9UPQ0 1083 aa23.7■■□□□ 1.38
RTKN-201ENST00000233330 KAT6BQ8WYB5 2073 aa23.7■■□□□ 1.38
RTKN-201ENST00000233330 CPA1P15085 419 aa23.69■■□□□ 1.38
RTKN-201ENST00000233330 CREB3L3Q68CJ9 461 aa23.69■■□□□ 1.38
RTKN-201ENST00000233330 ARXQ96QS3 562 aa23.69■■□□□ 1.38
RTKN-201ENST00000233330 ZNF330Q9Y3S2 320 aaPredicted RBP23.69■■□□□ 1.38
RTKN-201ENST00000233330 STARD3NLO95772 234 aa23.69■■□□□ 1.38
RTKN-201ENST00000233330 ZKSCAN1P17029 563 aaPredicted RBP23.69■■□□□ 1.38
RTKN-201ENST00000233330 HAUS7Q99871 368 aa23.69■■□□□ 1.38
RTKN-201ENST00000233330 GPR108Q9NPR9 543 aa23.69■■□□□ 1.38
RTKN-201ENST00000233330 IL15P40933 162 aaPredicted RBP23.68■■□□□ 1.38
RTKN-201ENST00000233330 TRIM28Q13263 835 aaKnown RBP23.68■■□□□ 1.38
RTKN-201ENST00000233330 VPS53Q5VIR6 699 aa23.68■■□□□ 1.38
RTKN-201ENST00000233330 KCNJ4P48050 445 aa23.68■■□□□ 1.38
RTKN-201ENST00000233330 KIF6Q6ZMV9 814 aa23.68■■□□□ 1.38
RTKN-201ENST00000233330 ZNF589Q86UQ0 364 aaPredicted RBP23.67■■□□□ 1.38
RTKN-201ENST00000233330 RPAP1Q9BWH6 1393 aaPredicted RBP23.67■■□□□ 1.38
RTKN-201ENST00000233330 EYA2O00167 538 aa23.67■■□□□ 1.38
RTKN-201ENST00000233330 MRE11P49959 708 aa23.67■■□□□ 1.38
RTKN-201ENST00000233330 CYP46A1Q9Y6A2 500 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms