RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 MYO5BQ9ULV0 1848 aa16.68■□□□□ 0.26
PCDHB3-201ENST00000231130 LARP1Q6PKG0 1096 aaKnown RBP16.68■□□□□ 0.26
PCDHB3-201ENST00000231130 NGDNQ8NEJ9 315 aaKnown RBP16.68■□□□□ 0.26
PCDHB3-201ENST00000231130 TSPYL1Q9H0U9 437 aa16.68■□□□□ 0.26
PCDHB3-201ENST00000231130 FEZ2Q9UHY8 353 aaPredicted RBP16.68■□□□□ 0.26
PCDHB3-201ENST00000231130 METP08581 1390 aa16.68■□□□□ 0.26
PCDHB3-201ENST00000231130 NR1I2O75469 434 aa16.68■□□□□ 0.26
PCDHB3-201ENST00000231130 CACTINQ8WUQ7 758 aaKnown RBP16.68■□□□□ 0.26
PCDHB3-201ENST00000231130 RBM8AQ9Y5S9 174 aaKnown RBP16.68■□□□□ 0.26
PCDHB3-201ENST00000231130 GOLGA6L19H0YKK7 550 aa16.68■□□□□ 0.26
PCDHB3-201ENST00000231130 SSH3Q8TE77 659 aa16.68■□□□□ 0.26
PCDHB3-201ENST00000231130 RUFY2Q8WXA3 655 aa16.68■□□□□ 0.26
PCDHB3-201ENST00000231130 AATKQ6ZMQ8 1374 aa16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 KIF20BQ96Q89 1820 aa16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 HSP90B1P14625 803 aaKnown RBP16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 ZSCAN25Q6NSZ9 544 aa16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 AACSQ86V21 672 aa16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 LRRC2Q9BYS8 371 aa16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 BOLA2Q9H3K6 86 aa16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 C9orf78Q9NZ63 289 aaPredicted RBP16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 TAF6LQ9Y6J9 622 aa16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 GTF2A1P52655 376 aaPredicted RBP16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 RAD51AP2Q09MP3 1159 aa16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 CCDC144BQ3MJ40 725 aa16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 GORABQ5T7V8 394 aa16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 CCDC144CPQ8IYA2 1237 aa16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 ALKQ9UM73 1620 aa16.67■□□□□ 0.26
PCDHB3-201ENST00000231130 HECW2Q9P2P5 1572 aa16.66■□□□□ 0.26
PCDHB3-201ENST00000231130 CRB1P82279 1406 aa16.66■□□□□ 0.26
PCDHB3-201ENST00000231130 GNAT3A8MTJ3 354 aa16.66■□□□□ 0.26
PCDHB3-201ENST00000231130 FBXO38Q6PIJ6 1188 aa16.66■□□□□ 0.26
PCDHB3-201ENST00000231130 PAXBP1Q9Y5B6 917 aa16.66■□□□□ 0.26
PCDHB3-201ENST00000231130 USP27XA6NNY8 438 aa16.66■□□□□ 0.26
PCDHB3-201ENST00000231130 GPATCH11Q8N954 259 aa16.66■□□□□ 0.26
PCDHB3-201ENST00000231130 ATP7BP35670 1465 aa16.66■□□□□ 0.26
PCDHB3-201ENST00000231130 TEX35Q5T0J7 233 aa16.66■□□□□ 0.26
PCDHB3-201ENST00000231130 CHPF2Q9P2E5 772 aa16.66■□□□□ 0.26
PCDHB3-201ENST00000231130 USP16Q9Y5T5 823 aa16.66■□□□□ 0.26
PCDHB3-201ENST00000231130 CDC42BPGQ6DT37 1551 aa16.66■□□□□ 0.26
PCDHB3-201ENST00000231130 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 ANKRD26Q9UPS8 1709 aa16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 BECN2A8MW95 431 aa16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 H3BQV1 296 aa16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 IFFO2Q5TF58 517 aa16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 TEX2Q8IWB9 1127 aa16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 IL17REQ8NFR9 667 aa16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 NDUFB9Q9Y6M9 179 aa16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 HTATSF1O43719 755 aaKnown RBP16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 JAK2O60674 1132 aa16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 GLRX3O76003 335 aaKnown RBP16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 ZNF75DP51815 510 aa16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 ESF1Q9H501 851 aaKnown RBP16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 MLH3Q9UHC1 1453 aa16.65■□□□□ 0.26
PCDHB3-201ENST00000231130 VPS53Q5VIR6 699 aa16.64■□□□□ 0.26
PCDHB3-201ENST00000231130 CREB3L3Q68CJ9 461 aa16.64■□□□□ 0.26
PCDHB3-201ENST00000231130 NLRP6P59044 892 aa16.64■□□□□ 0.25
PCDHB3-201ENST00000231130 PTPN14Q15678 1187 aa16.64■□□□□ 0.25
PCDHB3-201ENST00000231130 BLOC1S2Q6QNY1 142 aa16.64■□□□□ 0.25
PCDHB3-201ENST00000231130 EDC3Q96F86 508 aaKnown RBP16.64■□□□□ 0.25
PCDHB3-201ENST00000231130 LOC102724159A0A0B4J2E5 919 aa16.64■□□□□ 0.25
PCDHB3-201ENST00000231130 AIMP1Q12904 312 aaKnown RBP16.64■□□□□ 0.25
PCDHB3-201ENST00000231130 PWP2Q15269 919 aaKnown RBP16.64■□□□□ 0.25
PCDHB3-201ENST00000231130 ZSCAN31Q96LW9 406 aaPredicted RBP16.64■□□□□ 0.25
PCDHB3-201ENST00000231130 FMNL2Q96PY5 1086 aa16.64■□□□□ 0.25
PCDHB3-201ENST00000231130 SLC26A8Q96RN1 970 aa16.64■□□□□ 0.25
PCDHB3-201ENST00000231130 FSD1Q9BTV5 496 aa16.64■□□□□ 0.25
PCDHB3-201ENST00000231130 RASSF4Q9H2L5 321 aa16.64■□□□□ 0.25
PCDHB3-201ENST00000231130 NMIQ13287 307 aaPredicted RBP16.63■□□□□ 0.25
PCDHB3-201ENST00000231130 KRBA2Q6ZNG9 492 aa16.63■□□□□ 0.25
PCDHB3-201ENST00000231130 FTOQ9C0B1 505 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCDHB3-201ENST00000231130 KCNQ3O43525 872 aa16.63■□□□□ 0.25
PCDHB3-201ENST00000231130 SH2B1Q9NRF2 756 aaPredicted RBP16.63■□□□□ 0.25
PCDHB3-201ENST00000231130 KLHDC4Q8TBB5 520 aa16.63■□□□□ 0.25
PCDHB3-201ENST00000231130 GYS2P54840 703 aa16.62■□□□□ 0.25
PCDHB3-201ENST00000231130 GUCY1B3Q02153 619 aa16.62■□□□□ 0.25
PCDHB3-201ENST00000231130 LEO1Q8WVC0 666 aaPredicted RBP16.62■□□□□ 0.25
PCDHB3-201ENST00000231130 TRIM66O15016 1216 aa16.62■□□□□ 0.25
PCDHB3-201ENST00000231130 BMS1Q14692 1282 aaKnown RBP16.62■□□□□ 0.25
PCDHB3-201ENST00000231130 CWF19L2Q2TBE0 894 aaKnown RBP16.62■□□□□ 0.25
PCDHB3-201ENST00000231130 ZSWIM6Q9HCJ5 1215 aa16.62■□□□□ 0.25
PCDHB3-201ENST00000231130 ECHDC1Q9NTX5 307 aa16.62■□□□□ 0.25
PCDHB3-201ENST00000231130 SLC20A2Q08357 652 aa16.61■□□□□ 0.25
PCDHB3-201ENST00000231130 SKILP12757 684 aa16.61■□□□□ 0.25
PCDHB3-201ENST00000231130 RBM6P78332 1123 aaKnown RBP16.61■□□□□ 0.25
PCDHB3-201ENST00000231130 DNAAF4Q8WXU2 420 aa16.61■□□□□ 0.25
PCDHB3-201ENST00000231130 KLHL34Q8N239 644 aa16.61■□□□□ 0.25
PCDHB3-201ENST00000231130 CCDC171Q6TFL3 1326 aa16.61■□□□□ 0.25
PCDHB3-201ENST00000231130 TULP2O00295 520 aa16.6■□□□□ 0.25
PCDHB3-201ENST00000231130 CHGBP05060 677 aa16.6■□□□□ 0.25
PCDHB3-201ENST00000231130 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
PCDHB3-201ENST00000231130 SYT10Q6XYQ8 523 aa16.6■□□□□ 0.25
PCDHB3-201ENST00000231130 DHX37Q8IY37 1157 aaKnown RBP16.6■□□□□ 0.25
PCDHB3-201ENST00000231130 CCDC191Q8NCU4 936 aa16.6■□□□□ 0.25
PCDHB3-201ENST00000231130 GPATCH3Q96I76 525 aa16.6■□□□□ 0.25
PCDHB3-201ENST00000231130 PGBD1Q96JS3 809 aa16.6■□□□□ 0.25
PCDHB3-201ENST00000231130 SCAND2PQ9GZW5 306 aaPredicted RBP16.6■□□□□ 0.25
PCDHB3-201ENST00000231130 ERCC6LQ2NKX8 1250 aa16.6■□□□□ 0.25
PCDHB3-201ENST00000231130 BRF1Q92994 677 aa16.6■□□□□ 0.25
PCDHB3-201ENST00000231130 HDAC5Q9UQL6 1122 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms