RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 TFIP11Q9UBB9 837 aaKnown RBP17.77■□□□□ 0.43
UBE2D4-201ENST00000222402 ZDHHC9Q9Y397 364 aa17.77■□□□□ 0.43
UBE2D4-201ENST00000222402 CUL4AQ13619 759 aa17.76■□□□□ 0.43
UBE2D4-201ENST00000222402 KRT32Q14532 448 aa17.76■□□□□ 0.43
UBE2D4-201ENST00000222402 CAMK4Q16566 473 aa17.76■□□□□ 0.43
UBE2D4-201ENST00000222402 EAF2Q96CJ1 260 aaPredicted RBP17.76■□□□□ 0.43
UBE2D4-201ENST00000222402 ZNF496Q96IT1 587 aaPredicted RBP17.76■□□□□ 0.43
UBE2D4-201ENST00000222402 SPATA32Q96LK8 384 aa17.76■□□□□ 0.43
UBE2D4-201ENST00000222402 REREQ9P2R6 1566 aa17.76■□□□□ 0.43
UBE2D4-201ENST00000222402 FKBP4Q02790 459 aaKnown RBP eCLIP17.76■□□□□ 0.43
UBE2D4-201ENST00000222402 SPC24Q8NBT2 197 aa17.76■□□□□ 0.43
UBE2D4-201ENST00000222402 CCDC192P0DO97 292 aa17.75■□□□□ 0.43
UBE2D4-201ENST00000222402 GIMAP6Q6P9H5 292 aa17.75■□□□□ 0.43
UBE2D4-201ENST00000222402 SASS6Q6UVJ0 657 aa17.75■□□□□ 0.43
UBE2D4-201ENST00000222402 LSG1Q9H089 658 aaKnown RBP17.75■□□□□ 0.43
UBE2D4-201ENST00000222402 LMBR1LQ6UX01 489 aa17.75■□□□□ 0.43
UBE2D4-201ENST00000222402 NSFL1CQ9UNZ2 370 aaKnown RBP17.75■□□□□ 0.43
UBE2D4-201ENST00000222402 LRRFIP1Q32MZ4 808 aaKnown RBP17.75■□□□□ 0.43
UBE2D4-201ENST00000222402 VPS53Q5VIR6 699 aa17.75■□□□□ 0.43
UBE2D4-201ENST00000222402 NDUFB9Q9Y6M9 179 aa17.75■□□□□ 0.43
UBE2D4-201ENST00000222402 DIP2AQ14689 1571 aa17.75■□□□□ 0.43
UBE2D4-201ENST00000222402 EDC3Q96F86 508 aaKnown RBP17.74■□□□□ 0.43
UBE2D4-201ENST00000222402 APPP05067 770 aa17.74■□□□□ 0.43
UBE2D4-201ENST00000222402 RUFY3Q7L099 469 aa17.74■□□□□ 0.43
UBE2D4-201ENST00000222402 GOLGA6L19H0YKK7 550 aa17.74■□□□□ 0.43
UBE2D4-201ENST00000222402 LRRC2Q9BYS8 371 aa17.74■□□□□ 0.43
UBE2D4-201ENST00000222402 TNMDQ9H2S6 317 aa17.74■□□□□ 0.43
UBE2D4-201ENST00000222402 SLC52A2Q9HAB3 445 aa17.74■□□□□ 0.43
UBE2D4-201ENST00000222402 NRKQ7Z2Y5 1582 aa17.74■□□□□ 0.43
UBE2D4-201ENST00000222402 GOLIM4O00461 696 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 TPM2P07951 284 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 TFCP2Q12800 502 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 CLEC17AQ6ZS10 378 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 FBXW7Q969H0 707 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 NUP62CLQ9H1M0 184 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 CEP126Q9P2H0 1117 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 CPLX1O14810 134 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 CYP2E1P05181 493 aaPredicted RBP17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 BECN2A8MW95 431 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 PPFIA3O75145 1194 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 GCKRQ14397 625 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 CCDC57Q2TAC2 916 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 IL25Q9H293 177 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 USP16Q9Y5T5 823 aa17.73■□□□□ 0.43
UBE2D4-201ENST00000222402 EPB41L2O43491 1005 aaKnown RBP17.72■□□□□ 0.43
UBE2D4-201ENST00000222402 RBM10P98175 930 aaKnown RBP17.72■□□□□ 0.43
UBE2D4-201ENST00000222402 ADCK5Q3MIX3 580 aa17.72■□□□□ 0.43
UBE2D4-201ENST00000222402 AXIN2Q9Y2T1 843 aa17.72■□□□□ 0.43
UBE2D4-201ENST00000222402 METTL22Q9BUU2 404 aaPredicted RBP17.72■□□□□ 0.43
UBE2D4-201ENST00000222402 TOMM22Q9NS69 142 aa17.72■□□□□ 0.43
UBE2D4-201ENST00000222402 NEK1Q96PY6 1258 aa17.72■□□□□ 0.43
UBE2D4-201ENST00000222402 TLR7Q9NYK1 1049 aaKnown RBP17.71■□□□□ 0.43
UBE2D4-201ENST00000222402 DLG5Q8TDM6 1919 aa17.71■□□□□ 0.43
UBE2D4-201ENST00000222402 NEURL1BA8MQ27 555 aa17.71■□□□□ 0.43
UBE2D4-201ENST00000222402 IFIT1P09914 478 aaKnown RBP17.71■□□□□ 0.43
UBE2D4-201ENST00000222402 CCDC158Q5M9N0 1113 aa17.71■□□□□ 0.43
UBE2D4-201ENST00000222402 TTC39AQ5SRH9 613 aa17.71■□□□□ 0.43
UBE2D4-201ENST00000222402 FAM173BQ6P4H8 233 aa17.71■□□□□ 0.43
UBE2D4-201ENST00000222402 CCDC73Q6ZRK6 1079 aa17.71■□□□□ 0.43
UBE2D4-201ENST00000222402 RALYLQ86SE5 291 aaKnown RBP17.71■□□□□ 0.43
UBE2D4-201ENST00000222402 CKAP2LQ8IYA6 745 aa17.71■□□□□ 0.43
UBE2D4-201ENST00000222402 DCAF5Q96JK2 942 aa17.71■□□□□ 0.43
UBE2D4-201ENST00000222402 NPHP3Q7Z494 1330 aa17.71■□□□□ 0.43
UBE2D4-201ENST00000222402 PPP1R9BQ96SB3 815 aa17.71■□□□□ 0.42
UBE2D4-201ENST00000222402 AK9Q5TCS8 1911 aa17.71■□□□□ 0.42
UBE2D4-201ENST00000222402 SLC27A2O14975 620 aa17.7■□□□□ 0.42
UBE2D4-201ENST00000222402 MAP3K11Q16584 847 aa17.7■□□□□ 0.42
UBE2D4-201ENST00000222402 U3KPZ7 1027 aaPredicted RBP17.7■□□□□ 0.42
UBE2D4-201ENST00000222402 TRIM5Q9C035 493 aa17.7■□□□□ 0.42
UBE2D4-201ENST00000222402 HMG20BQ9P0W2 317 aa17.7■□□□□ 0.42
UBE2D4-201ENST00000222402 A0A0D9SFI3 127 aa17.7■□□□□ 0.42
UBE2D4-201ENST00000222402 ADCY5O95622 1261 aa17.69■□□□□ 0.42
UBE2D4-201ENST00000222402 BRF1Q92994 677 aa17.69■□□□□ 0.42
UBE2D4-201ENST00000222402 DBNDD2Q9BQY9 259 aa17.69■□□□□ 0.42
UBE2D4-201ENST00000222402 SCAND2PQ9GZW5 306 aaPredicted RBP17.69■□□□□ 0.42
UBE2D4-201ENST00000222402 SNRKQ9NRH2 765 aa17.69■□□□□ 0.42
UBE2D4-201ENST00000222402 CWC25Q9NXE8 425 aaPredicted RBP17.69■□□□□ 0.42
UBE2D4-201ENST00000222402 ERBB4Q15303 1308 aa17.69■□□□□ 0.42
UBE2D4-201ENST00000222402 CCDC129Q6ZRS4 1044 aa17.69■□□□□ 0.42
UBE2D4-201ENST00000222402 ADCY9O60503 1353 aa17.69■□□□□ 0.42
UBE2D4-201ENST00000222402 TRDNQ13061 729 aa17.69■□□□□ 0.42
UBE2D4-201ENST00000222402 ZNF830Q96NB3 372 aaPredicted RBP17.69■□□□□ 0.42
UBE2D4-201ENST00000222402 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.68■□□□□ 0.42
UBE2D4-201ENST00000222402 CCT2P78371 535 aaKnown RBP17.68■□□□□ 0.42
UBE2D4-201ENST00000222402 ME3Q16798 604 aa17.68■□□□□ 0.42
UBE2D4-201ENST00000222402 CADPS2Q86UW7 1296 aa17.68■□□□□ 0.42
UBE2D4-201ENST00000222402 ZKSCAN5Q9Y2L8 839 aa17.68■□□□□ 0.42
UBE2D4-201ENST00000222402 PHKG2P15735 406 aa17.68■□□□□ 0.42
UBE2D4-201ENST00000222402 KIF6Q6ZMV9 814 aa17.68■□□□□ 0.42
UBE2D4-201ENST00000222402 NRXN3Q9Y4C0 1643 aa17.68■□□□□ 0.42
UBE2D4-201ENST00000222402 C3P01024 1663 aa17.68■□□□□ 0.42
UBE2D4-201ENST00000222402 KDM4AO75164 1064 aa17.68■□□□□ 0.42
UBE2D4-201ENST00000222402 CHMP4CQ96CF2 233 aa17.68■□□□□ 0.42
UBE2D4-201ENST00000222402 MON2Q7Z3U7 1717 aa17.68■□□□□ 0.42
UBE2D4-201ENST00000222402 SALL3Q9BXA9 1300 aa17.68■□□□□ 0.42
UBE2D4-201ENST00000222402 SASH1O94885 1247 aa17.67■□□□□ 0.42
UBE2D4-201ENST00000222402 PDIA4P13667 645 aaKnown RBP17.67■□□□□ 0.42
UBE2D4-201ENST00000222402 GUCY1B3Q02153 619 aa17.67■□□□□ 0.42
UBE2D4-201ENST00000222402 TNNI3KQ59H18 835 aa17.67■□□□□ 0.42
UBE2D4-201ENST00000222402 FPGT-TNNI3KV9GXZ4 949 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms