RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 UTP14CQ5TAP6 766 aaKnown RBP18.34■□□□□ 0.53
TGFB1-201ENST00000221930 EAF2Q96CJ1 260 aaPredicted RBP18.34■□□□□ 0.53
TGFB1-201ENST00000221930 FAM227BQ96M60 508 aa18.34■□□□□ 0.53
TGFB1-201ENST00000221930 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
TGFB1-201ENST00000221930 LINS1Q8NG48 757 aa18.34■□□□□ 0.53
TGFB1-201ENST00000221930 RUFY2Q8WXA3 655 aa18.34■□□□□ 0.53
TGFB1-201ENST00000221930 TLR7Q9NYK1 1049 aaKnown RBP18.34■□□□□ 0.53
TGFB1-201ENST00000221930 ERBB3P21860 1342 aa18.33■□□□□ 0.53
TGFB1-201ENST00000221930 HEG1Q9ULI3 1381 aa18.33■□□□□ 0.53
TGFB1-201ENST00000221930 STX6O43752 255 aa18.33■□□□□ 0.53
TGFB1-201ENST00000221930 CCDC83Q8IWF9 413 aa18.33■□□□□ 0.53
TGFB1-201ENST00000221930 GPATCH3Q96I76 525 aa18.33■□□□□ 0.53
TGFB1-201ENST00000221930 SMC3Q9UQE7 1217 aa18.33■□□□□ 0.53
TGFB1-201ENST00000221930 ZSCAN22P10073 491 aaPredicted RBP18.33■□□□□ 0.52
TGFB1-201ENST00000221930 AEBP2Q6ZN18 517 aaPredicted RBP18.33■□□□□ 0.52
TGFB1-201ENST00000221930 NHSL1Q5SYE7 1610 aa18.33■□□□□ 0.52
TGFB1-201ENST00000221930 SPATA31A3Q5VYP0 1347 aa18.33■□□□□ 0.52
TGFB1-201ENST00000221930 COL9A3Q14050 684 aaPredicted RBP18.32■□□□□ 0.52
TGFB1-201ENST00000221930 PDIA6Q15084 440 aa18.32■□□□□ 0.52
TGFB1-201ENST00000221930 RIC3Q7Z5B4 369 aa18.32■□□□□ 0.52
TGFB1-201ENST00000221930 ERC1Q8IUD2 1116 aa18.32■□□□□ 0.52
TGFB1-201ENST00000221930 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.32■□□□□ 0.52
TGFB1-201ENST00000221930 ABCA3Q99758 1704 aa18.32■□□□□ 0.52
TGFB1-201ENST00000221930 TERF1P54274 439 aa18.32■□□□□ 0.52
TGFB1-201ENST00000221930 G3BP1Q13283 466 aaKnown RBP eCLIP18.32■□□□□ 0.52
TGFB1-201ENST00000221930 TSPY26PQ9H489 355 aa18.32■□□□□ 0.52
TGFB1-201ENST00000221930 DDX21Q9NR30 783 aaKnown RBP eCLIP18.32■□□□□ 0.52
TGFB1-201ENST00000221930 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
TGFB1-201ENST00000221930 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.32■□□□□ 0.52
TGFB1-201ENST00000221930 MRC1P22897 1456 aa18.32■□□□□ 0.52
TGFB1-201ENST00000221930 IGKV5-2P06315 115 aa18.31■□□□□ 0.52
TGFB1-201ENST00000221930 PIP4K2AP48426 406 aaPredicted RBP18.31■□□□□ 0.52
TGFB1-201ENST00000221930 JARID2Q92833 1246 aaPredicted RBP18.31■□□□□ 0.52
TGFB1-201ENST00000221930 SYAP1Q96A49 352 aaPredicted RBP18.31■□□□□ 0.52
TGFB1-201ENST00000221930 EVI5LQ96CN4 794 aa18.31■□□□□ 0.52
TGFB1-201ENST00000221930 KCNJ4P48050 445 aa18.31■□□□□ 0.52
TGFB1-201ENST00000221930 BOLA2Q9H3K6 86 aa18.31■□□□□ 0.52
TGFB1-201ENST00000221930 DDX58O95786 925 aaKnown RBP18.3■□□□□ 0.52
TGFB1-201ENST00000221930 NOL7Q9UMY1 257 aaKnown RBP18.3■□□□□ 0.52
TGFB1-201ENST00000221930 FIBPO43427 364 aa18.3■□□□□ 0.52
TGFB1-201ENST00000221930 GJB2P29033 226 aa18.3■□□□□ 0.52
TGFB1-201ENST00000221930 ZNF790Q6PG37 636 aa18.3■□□□□ 0.52
TGFB1-201ENST00000221930 NFATC2IPQ8NCF5 419 aa18.3■□□□□ 0.52
TGFB1-201ENST00000221930 NMIQ13287 307 aaPredicted RBP18.3■□□□□ 0.52
TGFB1-201ENST00000221930 NECAB1Q8N987 351 aa18.3■□□□□ 0.52
TGFB1-201ENST00000221930 NLRP2Q9NX02 1062 aa18.3■□□□□ 0.52
TGFB1-201ENST00000221930 CYP46A1Q9Y6A2 500 aa18.3■□□□□ 0.52
TGFB1-201ENST00000221930 NECTIN1Q15223 517 aa18.29■□□□□ 0.52
TGFB1-201ENST00000221930 RBM8AQ9Y5S9 174 aaKnown RBP18.29■□□□□ 0.52
TGFB1-201ENST00000221930 CCDC171Q6TFL3 1326 aa18.29■□□□□ 0.52
TGFB1-201ENST00000221930 HS1BP3Q53T59 392 aa18.29■□□□□ 0.52
TGFB1-201ENST00000221930 TCEANC2Q96MN5 208 aa18.29■□□□□ 0.52
TGFB1-201ENST00000221930 ZSWIM6Q9HCJ5 1215 aa18.29■□□□□ 0.52
TGFB1-201ENST00000221930 HDAC5Q9UQL6 1122 aa18.29■□□□□ 0.52
TGFB1-201ENST00000221930 F13A1P00488 732 aa18.28■□□□□ 0.52
TGFB1-201ENST00000221930 ME3Q16798 604 aa18.28■□□□□ 0.52
TGFB1-201ENST00000221930 EPHA10Q5JZY3 1008 aa18.28■□□□□ 0.52
TGFB1-201ENST00000221930 VPS53Q5VIR6 699 aa18.28■□□□□ 0.52
TGFB1-201ENST00000221930 ZKSCAN1P17029 563 aaPredicted RBP18.28■□□□□ 0.52
TGFB1-201ENST00000221930 COPS6Q7L5N1 327 aa18.28■□□□□ 0.52
TGFB1-201ENST00000221930 XAGE3Q8WTP9 111 aa18.28■□□□□ 0.52
TGFB1-201ENST00000221930 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
TGFB1-201ENST00000221930 A0A0D9SFI3 127 aa18.27■□□□□ 0.52
TGFB1-201ENST00000221930 CREB3L3Q68CJ9 461 aa18.27■□□□□ 0.52
TGFB1-201ENST00000221930 KLHL34Q8N239 644 aa18.27■□□□□ 0.52
TGFB1-201ENST00000221930 RAPGEF4Q8WZA2 1011 aa18.27■□□□□ 0.52
TGFB1-201ENST00000221930 EDC3Q96F86 508 aaKnown RBP18.27■□□□□ 0.52
TGFB1-201ENST00000221930 ST3GAL1Q11201 340 aa18.27■□□□□ 0.51
TGFB1-201ENST00000221930 MPNDQ8N594 471 aa18.27■□□□□ 0.51
TGFB1-201ENST00000221930 MYD88Q99836 296 aa18.27■□□□□ 0.51
TGFB1-201ENST00000221930 FSD1Q9BTV5 496 aa18.27■□□□□ 0.51
TGFB1-201ENST00000221930 UTYO14607 1347 aa18.26■□□□□ 0.51
TGFB1-201ENST00000221930 SOS2Q07890 1332 aaPredicted RBP18.26■□□□□ 0.51
TGFB1-201ENST00000221930 PHF14O94880 888 aa18.26■□□□□ 0.51
TGFB1-201ENST00000221930 DNM1Q05193 864 aaKnown RBP18.26■□□□□ 0.51
TGFB1-201ENST00000221930 TAF6LQ9Y6J9 622 aa18.26■□□□□ 0.51
TGFB1-201ENST00000221930 VPS37CA5D8V6 355 aaPredicted RBP18.26■□□□□ 0.51
TGFB1-201ENST00000221930 NEURL1BA8MQ27 555 aa18.26■□□□□ 0.51
TGFB1-201ENST00000221930 OFD1O75665 1012 aa18.26■□□□□ 0.51
TGFB1-201ENST00000221930 TMEM87AQ8NBN3 555 aa18.26■□□□□ 0.51
TGFB1-201ENST00000221930 NEXNQ0ZGT2 675 aa18.25■□□□□ 0.51
TGFB1-201ENST00000221930 LARP1Q6PKG0 1096 aaKnown RBP18.25■□□□□ 0.51
TGFB1-201ENST00000221930 MTERF4Q7Z6M4 381 aaKnown RBP18.25■□□□□ 0.51
TGFB1-201ENST00000221930 MAP4K1Q92918 833 aa18.25■□□□□ 0.51
TGFB1-201ENST00000221930 ZNF496Q96IT1 587 aaPredicted RBP18.25■□□□□ 0.51
TGFB1-201ENST00000221930 SLC52A2Q9HAB3 445 aa18.25■□□□□ 0.51
TGFB1-201ENST00000221930 TPCN1Q9ULQ1 816 aa18.25■□□□□ 0.51
TGFB1-201ENST00000221930 NDUFB9Q9Y6M9 179 aa18.25■□□□□ 0.51
TGFB1-201ENST00000221930 GCKRQ14397 625 aa18.25■□□□□ 0.51
TGFB1-201ENST00000221930 ZHX1Q9UKY1 873 aaPredicted RBP18.25■□□□□ 0.51
TGFB1-201ENST00000221930 MTMR6Q9Y217 621 aa18.25■□□□□ 0.51
TGFB1-201ENST00000221930 ZKSCAN5Q9Y2L8 839 aa18.25■□□□□ 0.51
TGFB1-201ENST00000221930 PAXIP1Q6ZW49 1069 aaPredicted RBP18.25■□□□□ 0.51
TGFB1-201ENST00000221930 TM6SF1Q9BZW5 370 aa18.25■□□□□ 0.51
TGFB1-201ENST00000221930 USP16Q9Y5T5 823 aa18.25■□□□□ 0.51
TGFB1-201ENST00000221930 KDM4FA0A1W2PPD8 638 aa18.24■□□□□ 0.51
TGFB1-201ENST00000221930 UBE2HP62256 183 aa18.24■□□□□ 0.51
TGFB1-201ENST00000221930 DMTNQ08495 405 aa18.24■□□□□ 0.51
TGFB1-201ENST00000221930 CCDC183Q5T5S1 534 aa18.24■□□□□ 0.51
TGFB1-201ENST00000221930 KCNB2Q92953 911 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms