RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 TRAPPC3LQ5T215 181 aa19.88■□□□□ 0.77
SNRPD3-201ENST00000215829 ARHGEF1Q92888 912 aaKnown RBP19.88■□□□□ 0.77
SNRPD3-201ENST00000215829 BICC1Q9H694 974 aaKnown RBP19.88■□□□□ 0.77
SNRPD3-201ENST00000215829 PDZRN3Q9UPQ7 1066 aa19.88■□□□□ 0.77
SNRPD3-201ENST00000215829 RGPD3A6NKT7 1758 aaPredicted RBP19.87■□□□□ 0.77
SNRPD3-201ENST00000215829 RGPD4Q7Z3J3 1758 aa19.87■□□□□ 0.77
SNRPD3-201ENST00000215829 SRGAP3O43295 1099 aa19.87■□□□□ 0.77
SNRPD3-201ENST00000215829 PCCAP05165 728 aaPredicted RBP19.87■□□□□ 0.77
SNRPD3-201ENST00000215829 ADRA2BP18089 450 aa19.87■□□□□ 0.77
SNRPD3-201ENST00000215829 ZBTB38Q8NAP3 1195 aaPredicted RBP19.87■□□□□ 0.77
SNRPD3-201ENST00000215829 UBN2Q6ZU65 1347 aa19.86■□□□□ 0.77
SNRPD3-201ENST00000215829 ZPR1O75312 459 aa19.85■□□□□ 0.77
SNRPD3-201ENST00000215829 EPHA10Q5JZY3 1008 aa19.85■□□□□ 0.77
SNRPD3-201ENST00000215829 UBR3Q6ZT12 1888 aa19.85■□□□□ 0.77
SNRPD3-201ENST00000215829 NUCB1Q02818 461 aa19.85■□□□□ 0.77
SNRPD3-201ENST00000215829 PARP10Q53GL7 1025 aa19.85■□□□□ 0.77
SNRPD3-201ENST00000215829 RTL5Q5HYW3 569 aaPredicted RBP19.85■□□□□ 0.77
SNRPD3-201ENST00000215829 USPL1Q5W0Q7 1092 aa19.85■□□□□ 0.77
SNRPD3-201ENST00000215829 SKAP1Q86WV1 359 aa19.85■□□□□ 0.77
SNRPD3-201ENST00000215829 PHF14O94880 888 aa19.84■□□□□ 0.77
SNRPD3-201ENST00000215829 RFC4P35249 363 aa19.84■□□□□ 0.77
SNRPD3-201ENST00000215829 RABL6Q3YEC7 729 aaPredicted RBP19.84■□□□□ 0.77
SNRPD3-201ENST00000215829 FAM89AQ96GI7 184 aa19.84■□□□□ 0.77
SNRPD3-201ENST00000215829 BCL2L12Q9HB09 334 aa19.84■□□□□ 0.77
SNRPD3-201ENST00000215829 NIP7Q9Y221 180 aaKnown RBP eCLIP19.84■□□□□ 0.77
SNRPD3-201ENST00000215829 SCN7AQ01118 1682 aa19.84■□□□□ 0.77
SNRPD3-201ENST00000215829 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.83■□□□□ 0.77
SNRPD3-201ENST00000215829 SSFA2P28290 1259 aa19.83■□□□□ 0.77
SNRPD3-201ENST00000215829 ANKRD45Q5TZF3 282 aa19.83■□□□□ 0.77
SNRPD3-201ENST00000215829 SRP68Q9UHB9 627 aaKnown RBP19.83■□□□□ 0.77
SNRPD3-201ENST00000215829 TRMT112Q9UI30 125 aaKnown RBP19.83■□□□□ 0.77
SNRPD3-201ENST00000215829 FOXO4P98177 505 aa19.83■□□□□ 0.76
SNRPD3-201ENST00000215829 SUSD4Q5VX71 490 aa19.83■□□□□ 0.76
SNRPD3-201ENST00000215829 CDHR2Q9BYE9 1310 aa19.82■□□□□ 0.76
SNRPD3-201ENST00000215829 USP42Q9H9J4 1324 aaKnown RBP19.82■□□□□ 0.76
SNRPD3-201ENST00000215829 CHD1LQ86WJ1 897 aa19.82■□□□□ 0.76
SNRPD3-201ENST00000215829 AKT1S1Q96B36 256 aa19.82■□□□□ 0.76
SNRPD3-201ENST00000215829 CAMKK2Q96RR4 588 aa19.82■□□□□ 0.76
SNRPD3-201ENST00000215829 PLA2G12BQ9BX93 195 aa19.82■□□□□ 0.76
SNRPD3-201ENST00000215829 C4AP0C0L4 1744 aa19.81■□□□□ 0.76
SNRPD3-201ENST00000215829 SF3B2Q13435 895 aaKnown RBP19.81■□□□□ 0.76
SNRPD3-201ENST00000215829 UTP14AQ9BVJ6 771 aaKnown RBP19.81■□□□□ 0.76
SNRPD3-201ENST00000215829 EN1Q05925 392 aaPredicted RBP19.8■□□□□ 0.76
SNRPD3-201ENST00000215829 EXOC6BQ9Y2D4 811 aa19.8■□□□□ 0.76
SNRPD3-201ENST00000215829 SURF6O75683 361 aaKnown RBP19.8■□□□□ 0.76
SNRPD3-201ENST00000215829 EZH2Q15910 746 aaKnown RBP19.8■□□□□ 0.76
SNRPD3-201ENST00000215829 TBC1D9BQ66K14 1250 aa19.8■□□□□ 0.76
SNRPD3-201ENST00000215829 LMBR1LQ6UX01 489 aa19.8■□□□□ 0.76
SNRPD3-201ENST00000215829 SYNE4Q8N205 404 aa19.8■□□□□ 0.76
SNRPD3-201ENST00000215829 NOP58Q9Y2X3 529 aaKnown RBP19.8■□□□□ 0.76
SNRPD3-201ENST00000215829 RGS3P49796 1198 aa19.79■□□□□ 0.76
SNRPD3-201ENST00000215829 ZNF827Q17R98 1081 aa19.79■□□□□ 0.76
SNRPD3-201ENST00000215829 LNPKQ9C0E8 428 aa19.79■□□□□ 0.76
SNRPD3-201ENST00000215829 TFCP2L1Q9NZI6 479 aa19.79■□□□□ 0.76
SNRPD3-201ENST00000215829 IRS4O14654 1257 aaPredicted RBP19.78■□□□□ 0.76
SNRPD3-201ENST00000215829 SH3TC1Q8TE82 1336 aa19.78■□□□□ 0.76
SNRPD3-201ENST00000215829 RAB11FIP3O75154 756 aa19.78■□□□□ 0.76
SNRPD3-201ENST00000215829 NTSR2O95665 410 aa19.78■□□□□ 0.76
SNRPD3-201ENST00000215829 BAG6P46379 1132 aa19.78■□□□□ 0.76
SNRPD3-201ENST00000215829 HSP90AB4PQ58FF6 505 aa19.78■□□□□ 0.76
SNRPD3-201ENST00000215829 SETDB2Q96T68 719 aa19.78■□□□□ 0.76
SNRPD3-201ENST00000215829 ZBTB47Q9UFB7 747 aaPredicted RBP19.78■□□□□ 0.76
SNRPD3-201ENST00000215829 FAM177BA6PVY3 158 aa19.77■□□□□ 0.76
SNRPD3-201ENST00000215829 PDE4AP27815 886 aa19.77■□□□□ 0.76
SNRPD3-201ENST00000215829 RFX5P48382 616 aaPredicted RBP19.77■□□□□ 0.76
SNRPD3-201ENST00000215829 APBB1O00213 710 aa19.76■□□□□ 0.75
SNRPD3-201ENST00000215829 CSF1RP07333 972 aa19.76■□□□□ 0.75
SNRPD3-201ENST00000215829 BICDL1Q6ZP65 573 aa19.76■□□□□ 0.75
SNRPD3-201ENST00000215829 PDE8AO60658 829 aa19.75■□□□□ 0.75
SNRPD3-201ENST00000215829 CCDC125Q86Z20 511 aa19.75■□□□□ 0.75
SNRPD3-201ENST00000215829 FLAD1Q8NFF5 587 aa19.75■□□□□ 0.75
SNRPD3-201ENST00000215829 LRRCC1Q9C099 1032 aa19.75■□□□□ 0.75
SNRPD3-201ENST00000215829 COPRSQ9NQ92 184 aa19.75■□□□□ 0.75
SNRPD3-201ENST00000215829 PA2G4Q9UQ80 394 aaKnown RBP19.75■□□□□ 0.75
SNRPD3-201ENST00000215829 CHMP3Q9Y3E7 222 aa19.75■□□□□ 0.75
SNRPD3-201ENST00000215829 GYS1P13807 737 aa19.75■□□□□ 0.75
SNRPD3-201ENST00000215829 HSP90B1P14625 803 aaKnown RBP19.75■□□□□ 0.75
SNRPD3-201ENST00000215829 SMARCA5O60264 1052 aaPredicted RBP19.74■□□□□ 0.75
SNRPD3-201ENST00000215829 PTPN12Q05209 780 aaKnown RBP19.74■□□□□ 0.75
SNRPD3-201ENST00000215829 NYXQ9GZU5 481 aa19.74■□□□□ 0.75
SNRPD3-201ENST00000215829 CTSWP56202 376 aa19.73■□□□□ 0.75
SNRPD3-201ENST00000215829 DEFB132Q7Z7B7 95 aa19.73■□□□□ 0.75
SNRPD3-201ENST00000215829 NUTM1Q86Y26 1132 aa19.73■□□□□ 0.75
SNRPD3-201ENST00000215829 TTLL11Q8NHH1 800 aa19.73■□□□□ 0.75
SNRPD3-201ENST00000215829 COL24A1Q17RW2 1714 aa19.73■□□□□ 0.75
SNRPD3-201ENST00000215829 MYH3P11055 1940 aa19.73■□□□□ 0.75
SNRPD3-201ENST00000215829 G3BP1Q13283 466 aaKnown RBP eCLIP19.72■□□□□ 0.753e-6■■□□□ 12.9
SNRPD3-201ENST00000215829 COL23A1Q86Y22 540 aaPredicted RBP19.72■□□□□ 0.75
SNRPD3-201ENST00000215829 ERC1Q8IUD2 1116 aa19.72■□□□□ 0.75
SNRPD3-201ENST00000215829 KLHDC4Q8TBB5 520 aa19.72■□□□□ 0.75
SNRPD3-201ENST00000215829 RHPN1Q8TCX5 695 aa19.72■□□□□ 0.75
SNRPD3-201ENST00000215829 KIF1BPQ96EK5 621 aa19.72■□□□□ 0.75
SNRPD3-201ENST00000215829 TUBGCP6Q96RT7 1819 aa19.72■□□□□ 0.75
SNRPD3-201ENST00000215829 HCLS1P14317 486 aaPredicted RBP19.72■□□□□ 0.75
SNRPD3-201ENST00000215829 OS9Q13438 667 aaPredicted RBP19.72■□□□□ 0.75
SNRPD3-201ENST00000215829 NFIXQ14938 502 aa19.72■□□□□ 0.75
SNRPD3-201ENST00000215829 CCDC57Q2TAC2 916 aa19.71■□□□□ 0.75
SNRPD3-201ENST00000215829 ERFEQ4G0M1 354 aa19.71■□□□□ 0.75
SNRPD3-201ENST00000215829 TPTE2Q6XPS3 522 aa19.71■□□□□ 0.75
SNRPD3-201ENST00000215829 NBPF5PQ86XG9 351 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms