RNA–Protein interactions for RNA: ENSMUST00000215510.1

Usp47-206, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

TSL 5 BASIC

Gene Usp47, Length 4,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-206ENSMUST00000215510 Rlbp1Q9Z275 317 aa12.16□□□□□ -0.46
Usp47-206ENSMUST00000215510 Mcm4P49717 862 aa12.16□□□□□ -0.46
Usp47-206ENSMUST00000215510 Triml1Q8BVP1 470 aa12.16□□□□□ -0.46
Usp47-206ENSMUST00000215510 Ttc12Q8BW49 704 aa12.16□□□□□ -0.46
Usp47-206ENSMUST00000215510 Kdm5cP41230 1554 aa12.16□□□□□ -0.46
Usp47-206ENSMUST00000215510 Tbc1d32Q3URV1 1296 aa12.16□□□□□ -0.46
Usp47-206ENSMUST00000215510 Pm20d1Q8C165 503 aa12.16□□□□□ -0.46
Usp47-206ENSMUST00000215510 Pik3ap1Q9EQ32 811 aa12.16□□□□□ -0.46
Usp47-206ENSMUST00000215510 Znf287Q9EQB9 759 aa12.16□□□□□ -0.46
Usp47-206ENSMUST00000215510 Txndc16Q7TN22 820 aa12.15□□□□□ -0.46
Usp47-206ENSMUST00000215510 Myl6bQ8CI43 207 aa12.15□□□□□ -0.46
Usp47-206ENSMUST00000215510 Bag4Q8CI61 457 aa12.15□□□□□ -0.46
Usp47-206ENSMUST00000215510 LlphQ9D945 130 aaKnown RBP12.15□□□□□ -0.46
Usp47-206ENSMUST00000215510 Ttc21aQ8C0S4 1314 aa12.15□□□□□ -0.46
Usp47-206ENSMUST00000215510 Map7d2A2AG50 781 aa12.15□□□□□ -0.46
Usp47-206ENSMUST00000215510 Usp5P56399 858 aaKnown RBP12.15□□□□□ -0.46
Usp47-206ENSMUST00000215510 Nucb1Q02819 459 aaKnown RBP12.15□□□□□ -0.46
Usp47-206ENSMUST00000215510 Nop14Q8R3N1 860 aaKnown RBP12.15□□□□□ -0.46
Usp47-206ENSMUST00000215510 MthfsQ9D110 203 aa12.15□□□□□ -0.46
Usp47-206ENSMUST00000215510 Fmn2Q9JL04 1578 aa12.15□□□□□ -0.46
Usp47-206ENSMUST00000215510 PtprtQ99M80 1454 aa12.15□□□□□ -0.47
Usp47-206ENSMUST00000215510 Kdm3aQ6PCM1 1323 aa12.15□□□□□ -0.47
Usp47-206ENSMUST00000215510 Slc1a4O35874 532 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Dnm1P39053 867 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Lrrc43Q3V0L5 667 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 RestQ8VIG1 1082 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Zbtb43Q9DAI4 467 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Gm16486A0A1D5RMD1 1434 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Catsper2A2ARP9 588 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Abcd1P48410 736 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 U2af1l4Q8BGJ9 220 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Gnl2Q99LH1 728 aaKnown RBP12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Erbb3Q61526 1339 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 HmmrQ00547 794 aaKnown RBP12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Ncf1Q09014 390 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Aldh8a1Q8BH00 487 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Zkscan8Q8BSL0 588 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Rbm17Q8JZX4 405 aaKnown RBP12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Dbndd1Q9CZ00 160 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 CenppQ9CZ92 286 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Tbc1d8Q9Z1A9 1134 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Dhx38Q80X98 1228 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Tmco3Q8BH01 678 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Vps16Q920Q4 839 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 WtapQ9ER69 396 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Mrvi1Q9WUX5 899 aaKnown RBP12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Irs4Q9Z0Y7 1216 aa12.14□□□□□ -0.47
Usp47-206ENSMUST00000215510 Gm21985Q6P6P5 1106 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Stxbp4Q9WV89 557 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Traf3ip1Q149C2 625 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Ano8Q6PB70 1060 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Hmg20bQ9Z104 317 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Fam208aQ69ZR9 1610 aaKnown RBP12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Rrbp1Q99PL5 1605 aaKnown RBP12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Mmp8O70138 465 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 MpndQ3TV65 487 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Gm12185Q5NCB2 835 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Ppp4r3aQ6P2K6 820 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Ccdc172Q810N9 267 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Slc4a8Q8JZR6 1089 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Prl3d3A0A0M6L0J6 224 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Dennd3A2RT67 1274 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Itga6Q61739 1091 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Smim5Q8BT42 78 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Naa16Q9DBB4 864 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Foxo3Q9WVH4 672 aa12.13□□□□□ -0.47
Usp47-206ENSMUST00000215510 Eif4a1P60843 406 aaKnown RBP12.12□□□□□ -0.47
Usp47-206ENSMUST00000215510 Bag1Q60739 355 aa12.12□□□□□ -0.47
Usp47-206ENSMUST00000215510 Fchsd1Q6PFY1 688 aa12.12□□□□□ -0.47
Usp47-206ENSMUST00000215510 Ccdc85cE9Q6B2 420 aa12.12□□□□□ -0.47
Usp47-206ENSMUST00000215510 Bsdc1Q80Y55 427 aa12.12□□□□□ -0.47
Usp47-206ENSMUST00000215510 Aldh1l2Q8K009 923 aa12.12□□□□□ -0.47
Usp47-206ENSMUST00000215510 Pbrm1Q8BSQ9 1634 aaKnown RBP12.12□□□□□ -0.47
Usp47-206ENSMUST00000215510 Tpx2A2APB8 745 aaKnown RBP12.12□□□□□ -0.47
Usp47-206ENSMUST00000215510 Arhgef1Q61210 920 aaKnown RBP12.12□□□□□ -0.47
Usp47-206ENSMUST00000215510 Mrpl44Q9CY73 333 aaKnown RBP12.12□□□□□ -0.47
Usp47-206ENSMUST00000215510 CltaO08585 235 aa12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Rad23bP54728 416 aa12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Scaf11E9PZM7 1456 aaKnown RBP12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Trim28Q62318 834 aa12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 DlatQ8BMF4 642 aa12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Lrrfip2Q91WK0 415 aa12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Rdm1Q9CQK3 281 aa12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Ssr1Q9CY50 286 aaKnown RBP12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Mrps25Q9D125 171 aaKnown RBP12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Eya2O08575 532 aa12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Ets1P27577 440 aa12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Wdr33Q8K4P0 1330 aaKnown RBP12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 SphkapQ6NSW3 1687 aa12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Zscan29E9Q5B4 869 aa12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Snrpa1P57784 255 aaKnown RBP12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 IbspQ61711 324 aa12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Bloc1s2Q9CWG9 143 aa12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Ftsj3Q9DBE9 838 aaKnown RBP12.11□□□□□ -0.47
Usp47-206ENSMUST00000215510 Ccdc150Q8CDI7 1110 aa12.1□□□□□ -0.47
Usp47-206ENSMUST00000215510 Znf131Q8K3J5 619 aa12.1□□□□□ -0.47
Usp47-206ENSMUST00000215510 Tmc2Q8R4P4 888 aa12.1□□□□□ -0.47
Usp47-206ENSMUST00000215510 Q9D5Q8 446 aa12.1□□□□□ -0.47
Usp47-206ENSMUST00000215510 Ak2Q9WTP6 239 aa12.1□□□□□ -0.47
Usp47-206ENSMUST00000215510 Cyp2ab1S4R196 498 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms