RNA–Protein interactions for RNA: ENSMUST00000163559.7

Ccr9-202, Transcript of C-C chemokine receptor type 9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccr9, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-202ENSMUST00000163559 Dis3l2Q8CI75 870 aaKnown RBP18.42■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Pnma3Q8JZW8 466 aa18.42■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Iffo2Q8R2V2 512 aa18.42■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Rrs1Q9CYH6 365 aaKnown RBP18.42■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Nphp3Q7TNH6 1325 aa18.42■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Gm21663A0A0G2JE01 267 aa18.41■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Rbbp8nlA2ABX0 614 aa18.41■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Gm7361D3Z6R1 267 aa18.41■□□□□ 0.54
Ccr9-202ENSMUST00000163559 5031410I06RikE9Q4E0 267 aa18.41■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Gm1979E9QAN3 267 aa18.41■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Gm5862K7N5V5 267 aa18.41■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Gm10220K7N660 267 aa18.41■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Ube2hP62257 183 aa18.41■□□□□ 0.54
Ccr9-202ENSMUST00000163559 HellsQ60848 821 aa18.41■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Mknk2Q8CDB0 459 aa18.41■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Lmbrd2Q8C561 694 aa18.41■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Cchcr1Q8K2I2 770 aa18.41■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Ndufa8Q9DCJ5 172 aa18.41■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Ythdc1E9Q5K9 736 aaKnown RBP18.4■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Timm10P62073 90 aa18.4■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Iqsec3Q3TES0 1195 aa18.4■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Me3Q8BMF3 604 aa18.4■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Ripk4Q9ERK0 786 aa18.4■□□□□ 0.54
Ccr9-202ENSMUST00000163559 CrebrfQ8CDG5 640 aaKnown RBP18.4■□□□□ 0.54
Ccr9-202ENSMUST00000163559 NpeppsQ11011 920 aa18.39■□□□□ 0.54
Ccr9-202ENSMUST00000163559 Col14a1Q80X19 1797 aa18.39■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Pcdh10E9PXQ7 1057 aa18.39■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Lnx1O70263 728 aa18.39■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Ctdnep1Q3TP92 244 aa18.39■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Zfp51Q3U4L8 781 aa18.39■□□□□ 0.53
Ccr9-202ENSMUST00000163559 TrhQ62361 256 aa18.39■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Fkbp5Q64378 456 aa18.39■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Sp8Q8BMJ8 486 aa18.39■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Nup88Q8CEC0 753 aaKnown RBP18.39■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Cfap73J3QPZ5 306 aa18.39■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Nlrp9bQ66X22 1003 aa18.39■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Nap1l3Q794H2 544 aa18.38■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Atf7Q8R0S1 413 aa18.38■□□□□ 0.53
Ccr9-202ENSMUST00000163559 MypnQ5DTJ9 1315 aa18.38■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Kcnb2A6H8H5 907 aa18.38■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Ifit1Q64282 463 aa18.38■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Ubxn10Q8BG34 277 aa18.38■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Dmrt2Q8BG36 561 aa18.38■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Efcab2Q9CQ46 164 aa18.38■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Kiaa0232Q80U59 1396 aaKnown RBP18.37■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Mindy4Q3UQI9 744 aa18.37■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Adam1aQ60813 791 aa18.37■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Acsbg1Q99PU5 721 aa18.37■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Gpatch11Q3UFS4 262 aa18.37■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Pip4k2bQ80XI4 416 aa18.37■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Golim4Q8BXA1 655 aa18.37■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Esyt1Q3U7R1 1092 aaKnown RBP18.36■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Ubash3aQ3V3E1 624 aa18.36■□□□□ 0.53
Ccr9-202ENSMUST00000163559 NaspQ99MD9 773 aaKnown RBP18.36■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Nid2O88322 1403 aa18.36■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Bach2P97303 839 aa18.36■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Atf3Q60765 181 aa18.36■□□□□ 0.53
Ccr9-202ENSMUST00000163559 BcanQ61361 883 aa18.36■□□□□ 0.53
Ccr9-202ENSMUST00000163559 FanccP50652 591 aa18.36■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Cct2P80314 535 aaKnown RBP18.36■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Rnf20Q5DTM8 973 aa18.36■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Rps6kb1Q8BSK8 525 aa18.36■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Lrrfip2Q91WK0 415 aa18.36■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Med4Q9CQA5 270 aa18.36■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Irgm2A0A140LIF8 407 aa18.35■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Eef2kO08796 724 aa18.35■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Kank4Q6P9J5 1016 aa18.35■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Ripor2Q80U16 1078 aa18.35■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Slc5a1Q8C3K6 665 aa18.35■□□□□ 0.53
Ccr9-202ENSMUST00000163559 StrbpQ91WM1 672 aaKnown RBP18.35■□□□□ 0.53
Ccr9-202ENSMUST00000163559 DmtnQ9WV69 405 aa18.35■□□□□ 0.53
Ccr9-202ENSMUST00000163559 RgmbQ7TQ33 436 aa18.35■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Serpina10Q8R121 448 aa18.35■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Psma5Q9Z2U1 241 aaKnown RBP18.35■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Simc1E9Q6E9 1354 aa18.35■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Prl7a2O54831 253 aa18.34■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Mmel1Q9JLI3 765 aa18.34■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Txnrd1Q9JMH6 613 aa18.34■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Gm21680A0A0G2JGR8 267 aa18.34■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Pde3bQ61409 1100 aa18.34■□□□□ 0.53
Ccr9-202ENSMUST00000163559 InsrrQ9WTL4 1300 aa18.34■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Ccdc129Q14B48 1034 aa18.33■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Leo1Q5XJE5 667 aa18.33■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Anp32cQ64G17 123 aa18.33■□□□□ 0.53
Ccr9-202ENSMUST00000163559 Zfp113Q8C689 439 aa18.33■□□□□ 0.52
Ccr9-202ENSMUST00000163559 ZwintQ9CQU5 252 aa18.33■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Bloc1s2Q9CWG9 143 aa18.33■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Spata31d1bE9QA57 1361 aa18.33■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Nfe2l3Q9WTM4 660 aa18.33■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Brpf3B2KF05 1204 aaKnown RBP18.32■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Kcnq3Q8K3F6 873 aa18.32■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Bicd2Q921C5 820 aa18.32■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Rims2Q9EQZ7 1530 aa18.32■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Syde2E9PUP1 1314 aa18.32■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Ttc19Q8CC21 365 aa18.31■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Mctp1E9PV86 951 aa18.31■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Tpm2P58774 284 aa18.31■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Rbm17Q8JZX4 405 aaKnown RBP18.31■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Pes1Q9EQ61 584 aaKnown RBP18.31■□□□□ 0.52
Ccr9-202ENSMUST00000163559 Usp25P57080 1055 aa18.31■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms