RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Map3k9Q3U1V8 1077 aa19.67■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Znf428Q8C1M2 176 aa19.67■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Polr3glQ8R0C0 218 aa19.67■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Ttc14Q9CSP9 761 aa19.67■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Ptf1aQ9QX98 324 aa19.67■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Gja10Q9WUS4 505 aa19.67■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Exoc6bA6H5Z3 810 aa19.66■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Rangap1P46061 589 aaKnown RBP19.66■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Igflr1Q3U4N7 345 aa19.66■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 KarsQ99MN1 595 aaKnown RBP19.66■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Foxo4Q9WVH3 505 aa19.66■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Cyp19a1P28649 503 aa19.65■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Chl1P70232 1209 aa19.65■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 EappQ5BU09 281 aa19.65■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Ccdc60Q8C4J0 545 aa19.65■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Ttc41Q692V3 1318 aa19.65■□□□□ 0.74
Hmgb1-208ENSMUST00000139443 Cyp2d11P24457 504 aa19.64■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 BcanQ61361 883 aa19.64■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Ttc19Q8CC21 365 aa19.64■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Sde2Q8K1J5 448 aaKnown RBP19.64■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Fam213aQ9CYH2 218 aa19.64■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Ehd4Q9EQP2 541 aa19.64■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Mybbp1aQ7TPV4 1344 aaKnown RBP19.64■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Kank1E9Q238 1360 aa19.63■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Ppm1mQ8BU27 406 aa19.63■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 UvssaQ9D479 717 aa19.63■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Btaf1E9QAE3 1848 aa19.62■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Trim34bJ3QNR8 485 aa19.62■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Mphosph10Q810V0 681 aaKnown RBP19.62■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Clca2Q8BG22 942 aa19.62■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Dydc2Q9D3X8 139 aa19.62■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Znf609Q8BZ47 1413 aa19.61■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Ccdc171E9Q1U1 1324 aa19.61■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Csf1rP09581 977 aa19.61■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Usp48Q3V0C5 1052 aa19.61■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Gas2l2Q5SSG4 860 aa19.61■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Vil1Q62468 827 aa19.61■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Sf3b3Q921M3 1217 aaKnown RBP19.61■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Rtn4Q99P72 1162 aaKnown RBP19.61■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Adarb2Q9JI20 745 aa19.6■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Mical3Q8CJ19 1993 aa19.59■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Oas2E9Q9A9 742 aa19.59■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 NmiO35309 314 aa19.59■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Zc3h15Q3TIV5 426 aaKnown RBP19.59■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Gpr101Q80T62 511 aa19.59■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 Myo3bQ1EG27 1305 aa19.58■□□□□ 0.73
Hmgb1-208ENSMUST00000139443 PgfP49764 158 aa19.58■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Tmco5bQ80X59 307 aa19.58■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 PnnO35691 725 aaKnown RBP19.57■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Zbtb38Q3LR78 1197 aa19.57■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Nol10Q5RJG1 687 aaKnown RBP19.57■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Insm1Q63ZV0 521 aa19.57■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Rasgrp4Q8BTM9 673 aa19.57■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Glt1d1A4FUP9 346 aa19.56■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Vsig10D3YX43 558 aa19.56■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Atp6v1aP50516 617 aaKnown RBP19.56■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 G3bp1P97855 465 aaKnown RBP19.56■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 HellsQ60848 821 aa19.56■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Lmbr1lQ9D1E5 489 aa19.56■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Ppp1r3fQ9JIG4 799 aa19.56■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Col24a1Q30D77 1733 aa19.56■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Zfp646Q6NV66 1788 aa19.55■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Chrna5Q2MKA5 467 aa19.55■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Zfp444Q3TDV8 331 aaKnown RBP19.55■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Gja3Q64448 417 aa19.55■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Plekhm2Q80TQ5 1018 aa19.55■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Myoz2Q9JJW5 264 aa19.55■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Ltn1Q6A009 1767 aa19.55■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Eif6O55135 245 aa19.54■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Cfdp1O88271 295 aaKnown RBP19.54■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Nectin2P32507 530 aa19.54■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Plcb3P51432 1234 aaKnown RBP19.54■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Rps8P62242 208 aaKnown RBP19.54■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Pcsk7Q61139 770 aa19.54■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Cavin2Q63918 418 aaKnown RBP19.54■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Ripor2Q80U16 1078 aa19.54■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Smc4Q8CG47 1286 aa19.54■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Naa16Q9DBB4 864 aa19.54■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Scn9aQ62205 1984 aa19.53■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Greb1lB9EJV3 1913 aa19.53■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Lrch1P62046 709 aa19.53■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 VeztQ3ZK22 780 aa19.53■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Kif2cQ922S8 721 aa19.53■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Upf1Q9EPU0 1124 aaKnown RBP19.53■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Zdbf2Q5SS00 2493 aaKnown RBP19.53■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Setdb1O88974 1307 aa19.52■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Map3k13Q1HKZ5 959 aa19.52■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 NexnQ7TPW1 607 aa19.52■□□□□ 0.72
Hmgb1-208ENSMUST00000139443 Eddm13E9Q7F5 164 aa19.51■□□□□ 0.71
Hmgb1-208ENSMUST00000139443 Zap70P43404 618 aa19.51■□□□□ 0.71
Hmgb1-208ENSMUST00000139443 NfixP70257 488 aa19.51■□□□□ 0.71
Hmgb1-208ENSMUST00000139443 Aifm3Q3TY86 605 aa19.51■□□□□ 0.71
Hmgb1-208ENSMUST00000139443 Gdf11Q9Z1W4 405 aa19.51■□□□□ 0.71
Hmgb1-208ENSMUST00000139443 4931408C20RikE9PWP9 1381 aa19.51■□□□□ 0.71
Hmgb1-208ENSMUST00000139443 Rbm46P86049 533 aa19.5■□□□□ 0.71
Hmgb1-208ENSMUST00000139443 Tom1l2Q5SRX1 507 aa19.5■□□□□ 0.71
Hmgb1-208ENSMUST00000139443 Bend3Q6PAL0 825 aa19.5■□□□□ 0.71
Hmgb1-208ENSMUST00000139443 Glis2Q8VDL9 521 aa19.5■□□□□ 0.71
Hmgb1-208ENSMUST00000139443 Map3k15A2AQW0 1331 aa19.5■□□□□ 0.71
Hmgb1-208ENSMUST00000139443 Ofd1Q80Z25 1017 aa19.49■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms