RNA–Protein interactions for RNA: ENSMUST00000127430.1

Smchd1-201, Transcript of Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Smchd1, Length 7,052 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1-201ENSMUST00000127430 Six6os1Q9CTN5 574 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Gm28510A0A087WP28 240 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Mcm5P49718 733 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Cct2P80314 535 aaKnown RBP11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 B4galnt4Q766D5 1034 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Pnpla2Q8BJ56 486 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Triml1Q8BVP1 470 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ankrd44B2RXR6 993 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Sem1P60897 70 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Cplx4Q80WM3 160 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Egfem1Q8C088 590 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Smg7Q5RJH6 1138 aaKnown RBP11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Gucy1a3Q9ERL9 691 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Mmrn2A6H6E2 943 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Stat1P42225 749 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Mum1Q6DID5 682 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Zbtb41Q811F1 908 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Tmem67Q8BR76 992 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ebag9Q9D0V7 213 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Zranb2Q9R020 330 aaKnown RBP11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Pik3r4Q8VD65 1358 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Opa1P58281 960 aa11.48□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Nop53Q8BK35 484 aaKnown RBP11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Bag3Q9JLV1 577 aaKnown RBP11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 AdnpQ9Z103 1108 aaKnown RBP11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Hmg20bQ9Z104 317 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Duxf3A0A0N4SV92 674 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Dapk3O54784 448 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Specc1Q5SXY1 1067 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Yeats4Q9CR11 227 aaKnown RBP11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Diaph1O08808 1255 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Kif5bQ61768 963 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ano6Q6P9J9 911 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Cttnbp2B9EJA2 1648 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 E9QMW4 1145 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Capn2O08529 700 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ccdc174Q3U155 467 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Zpr1Q62384 459 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Specc1lQ2KN98 1118 aaKnown RBP11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Usp33Q8R5K2 909 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Hsf2bpQ9D4G2 338 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Atp1a4Q9WV27 1032 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Setdb1O88974 1307 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Zranb3Q6NZP1 1069 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ttc19Q8CC21 365 aa11.47□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Speer4aF8VPX6 267 aa11.46□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Map3k11Q80XI6 850 aa11.46□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Cdk19Q8BWD8 501 aa11.46□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Riok1Q922Q2 567 aa11.46□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Mxra7Q9CZH7 178 aa11.46□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Trim34bJ3QNR8 485 aa11.46□□□□□ -0.57
Smchd1-201ENSMUST00000127430 RpgrQ9R0X5 1001 aa11.46□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Uchl5Q9WUP7 329 aa11.46□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ttc21aQ8C0S4 1314 aa11.46□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ces1hD3Z298 562 aa11.46□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Ankrd40Q5SUE8 363 aa11.46□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Krt23Q99PS0 422 aa11.46□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Dpf1Q9QX66 387 aa11.46□□□□□ -0.57
Smchd1-201ENSMUST00000127430 Il16O54824 1322 aa11.46□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Zbtb16Q3UQ17 673 aa11.46□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Galntl5Q9D4M9 431 aa11.46□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Lztfl1Q9JHQ5 299 aa11.46□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Ccdc152E9PX14 254 aa11.46□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Ift88Q61371 824 aa11.46□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Trak2Q6P9N8 913 aa11.46□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Ddx10Q80Y44 875 aaKnown RBP11.46□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Gm28919A0A087WP35 240 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Gm44503E9PYU5 387 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Stmn4P63042 189 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Gbp8Q2V6D6 525 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 CenppQ9CZ92 286 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Tiam1Q60610 1591 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 ClgnP52194 611 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Tmco4Q91WU4 631 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 HnrnpmQ9D0E1 729 aaKnown RBP11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Cdr1E9Q0B4 517 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Stk38lQ7TSE6 464 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Grk2Q99MK8 689 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Nfxl1E9Q8I7 918 aaKnown RBP11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Oas2E9Q9A9 742 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Gadd45bP22339 160 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Api5O35841 504 aaKnown RBP11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 LifrP42703 1092 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 EappQ5BU09 281 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Tnip1Q9WUU8 647 aa11.45□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Zfp853A0A1D5RM95 733 aa11.44□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Tnni2P13412 182 aa11.44□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Tex35Q14BK3 207 aa11.44□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Anp32cQ64G17 123 aa11.44□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Rrs1Q9CYH6 365 aaKnown RBP11.44□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Mrps9Q9D7N3 390 aaKnown RBP11.44□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Gm1043A0A140LJC2 1431 aa11.44□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Ptgs1P22437 602 aa11.44□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Frat1P70339 274 aa11.44□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Dact3Q0PHV7 610 aa11.44□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Fam180aQ8BR21 173 aa11.44□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Enox2Q8R0Z2 598 aa11.44□□□□□ -0.58
Smchd1-201ENSMUST00000127430 SfpqQ8VIJ6 699 aaKnown RBP11.44□□□□□ -0.58
Smchd1-201ENSMUST00000127430 Spata17Q9D552 379 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms