RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Nphp3Q7TNH6 1325 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Ctdp1Q7TSG2 960 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Zswim4Q8C7B8 1101 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Pkd2l2Q9JLG4 621 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Rbbp8nlA2ABX0 614 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Ift122Q6NWV3 1182 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Nol11Q8BJW5 723 aaKnown RBP17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Ddx27Q921N6 760 aaKnown RBP17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Echdc1Q9D9V3 322 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Dph6Q9CQ28 267 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Hip1rQ9JKY5 1068 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Gm10093D3YYI8 482 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 E9QMW4 1145 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Hdac1O09106 482 aaKnown RBP17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Dact3Q0PHV7 610 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Ano6Q6P9J9 911 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Tbc1d8Q9Z1A9 1134 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 PaskQ8CEE6 1383 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 F2rP30558 430 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Spg7Q3ULF4 781 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Slf2Q6P9P0 1278 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Bloc1s4Q8VED2 215 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 RalgapbQ8BQZ4 1484 aa17.87■□□□□ 0.45
Ubr2-201ENSMUST00000113335 LifrP42703 1092 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Fez2Q6TYB5 348 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Idi2Q8BFZ6 227 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Nsfl1cQ9CZ44 370 aaKnown RBP17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 CenppQ9CZ92 286 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Tyro3P55144 880 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Ctage5Q8R311 779 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Cnot6lQ8VEG6 555 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Camsap2Q8C1B1 1461 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Tbc1d8bA3KGB4 1114 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 WtapQ9ER69 396 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 AmfrQ9R049 643 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Rprd2Q6NXI6 1469 aaKnown RBP17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Ppfibp2O35711 882 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Krt25Q8VCW2 446 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Rad50P70388 1312 aa17.86■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Rfx7F8VPJ6 1459 aa17.85■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Fam83gQ5SWY7 812 aa17.85■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Ankle2Q6P1H6 964 aa17.85■□□□□ 0.45
Ubr2-201ENSMUST00000113335 L1td1Q587J6 782 aaKnown RBP17.85■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Shtn1Q8K2Q9 631 aa17.85■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Speer4dL7N216 212 aa17.84■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Paip2Q9D6V8 124 aa17.84■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Fam135aQ6NS59 1506 aa17.84■□□□□ 0.45
Ubr2-201ENSMUST00000113335 CalcaP70160 136 aa17.84■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Ccdc42Q5SV66 316 aa17.84■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Specc1Q5SXY1 1067 aa17.84■□□□□ 0.45
Ubr2-201ENSMUST00000113335 ParvgQ9ERD8 331 aa17.84■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Caskin1Q6P9K8 1431 aa17.84■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Ifit1bl2Q3U687 466 aa17.84■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Yeats4Q9CR11 227 aaKnown RBP17.84■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Brd1E9PZ26 1189 aaKnown RBP17.84■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Izumo3A6PWV3 263 aa17.83■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Psmd1Q3TXS7 953 aa17.83■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Fermt2Q8CIB5 680 aa17.83■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Clul1Q3ZRW6 464 aa17.83■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Amotl1Q9D4H4 968 aa17.83■□□□□ 0.45
Ubr2-201ENSMUST00000113335 Zbtb43Q9DAI4 467 aa17.83■□□□□ 0.45
Ubr2-201ENSMUST00000113335 NpcdF8VQB8 469 aa17.83■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Slc14a2Q8R4T9 930 aa17.83■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Ces1aE9PYP1 563 aa17.83■□□□□ 0.44
Ubr2-201ENSMUST00000113335 SfpqQ8VIJ6 699 aaKnown RBP17.83■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Krt15Q61414 452 aa17.83■□□□□ 0.44
Ubr2-201ENSMUST00000113335 RarsQ9D0I9 660 aaKnown RBP17.83■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Sbno1Q689Z5 1390 aa17.82■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Gadd45bP22339 160 aa17.82■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Kif2aP28740 705 aa17.82■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Ccdc94Q9D6J3 314 aa17.82■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Usp5P56399 858 aaKnown RBP17.82■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Tmem266Q8BZB3 538 aa17.82■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Exoc1Q8R3S6 894 aa17.82■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Ttc5Q99LG4 440 aa17.82■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Mrps25Q9D125 171 aaKnown RBP17.82■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Ranbp6Q8BIV3 1105 aa17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Zfp853A0A1D5RM95 733 aa17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Capza3P70190 299 aa17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Ccdc122Q8BVN0 290 aa17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Kdm3aQ6PCM1 1323 aa17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Krt79Q8VED5 531 aa17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Lmbr1lQ9D1E5 489 aa17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Gdpd2Q9ESM6 539 aa17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Slc1a4O35874 532 aa17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Ccdc148Q6P5U8 527 aa17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Ppp1r10Q80W00 888 aaKnown RBP17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Ano1Q8BHY3 960 aa17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Ift74Q8BKE9 600 aa17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Ptcd1Q8C2E4 695 aaKnown RBP17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Plekho1Q9JIY0 408 aa17.81■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Sptlc2P97363 560 aaKnown RBP17.8■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Atp8b2P98199 1209 aa17.8■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Haus2Q9CQS9 234 aa17.8■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Fam186bD3Z420 943 aa17.8■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Speer4aF8VPX6 267 aa17.8■□□□□ 0.44
Ubr2-201ENSMUST00000113335 DlatQ8BMF4 642 aa17.8■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Pik3ap1Q9EQ32 811 aa17.8■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Spocd1B1ASB6 936 aa17.8■□□□□ 0.44
Ubr2-201ENSMUST00000113335 Kiaa1524Q8BWY9 907 aa17.8■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms