RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Gbp5Q8CFB4 590 aa20.87■□□□□ 0.93
Trim71-201ENSMUST00000111816 Bag4Q8CI61 457 aa20.87■□□□□ 0.93
Trim71-201ENSMUST00000111816 Tbc1d2bQ3U0J8 965 aa20.87■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ell2Q3UKU1 639 aa20.87■□□□□ 0.93
Trim71-201ENSMUST00000111816 Rassf10Q8BL43 508 aa20.87■□□□□ 0.93
Trim71-201ENSMUST00000111816 Cog6Q8R3I3 657 aa20.87■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ddx27Q921N6 760 aaKnown RBP20.87■□□□□ 0.93
Trim71-201ENSMUST00000111816 Mmel1Q9JLI3 765 aa20.87■□□□□ 0.93
Trim71-201ENSMUST00000111816 Arid3cA6PWV5 409 aa20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ube3aO08759 870 aa20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Tnnc1P19123 161 aa20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Hmgb2P30681 210 aaKnown RBP20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ccdc25Q78PG9 208 aa20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Mgea5Q9EQQ9 916 aa20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ppfia3P60469 1194 aa20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Lekr1B2RVN1 116 aa20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Krt90E9Q1Z0 538 aa20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Gm6583E9Q8Z1 469 aa20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ttc4Q8R3H9 386 aa20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Diaph2O70566 1098 aa20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Vps52Q8C754 723 aaKnown RBP20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 HscbQ8K3A0 234 aa20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Elp1Q7TT37 1333 aaKnown RBP20.86■□□□□ 0.93
Trim71-201ENSMUST00000111816 Mapk8ip1Q9WVI9 707 aa20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ampd3O08739 766 aa20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 Bcl2l13P59017 434 aa20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 Trim34aQ99PP6 485 aa20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 LrgukQ9D5S7 820 aa20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ddx24Q9ESV0 857 aaKnown RBP20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 Cwc27Q3TKY6 469 aa20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ndufab1Q9CR21 156 aa20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 ZfaP23607 742 aa20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 Mum1l1Q4VA55 681 aa20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 Cdan1Q8CC12 1239 aa20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 Cct4P80315 539 aaKnown RBP20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 Zfp91Q62511 572 aa20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ccdc160Q3UYG1 323 aa20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 Trim6Q8BGE7 488 aa20.85■□□□□ 0.93
Trim71-201ENSMUST00000111816 Iqca1lA6H690 825 aa20.84■□□□□ 0.93
Trim71-201ENSMUST00000111816 Atad3Q925I1 591 aa20.84■□□□□ 0.93
Trim71-201ENSMUST00000111816 Dnajc21E9Q8D0 531 aa20.84■□□□□ 0.93
Trim71-201ENSMUST00000111816 Fchsd2Q3USJ8 740 aa20.84■□□□□ 0.93
Trim71-201ENSMUST00000111816 Klf15Q9EPW2 415 aa20.84■□□□□ 0.93
Trim71-201ENSMUST00000111816 Adcy3Q8VHH7 1145 aa20.84■□□□□ 0.93
Trim71-201ENSMUST00000111816 Mier3Q3UHF3 551 aa20.84■□□□□ 0.93
Trim71-201ENSMUST00000111816 Taok1Q5F2E8 1001 aa20.84■□□□□ 0.93
Trim71-201ENSMUST00000111816 Shq1Q7TMX5 569 aa20.84■□□□□ 0.93
Trim71-201ENSMUST00000111816 Nub1P54729 614 aa20.84■□□□□ 0.93
Trim71-201ENSMUST00000111816 Limch1Q3UH68 1057 aa20.84■□□□□ 0.93
Trim71-201ENSMUST00000111816 Dzip1lQ499E4 774 aa20.84■□□□□ 0.93
Trim71-201ENSMUST00000111816 Taf4bG5E8Z2 855 aa20.84■□□□□ 0.93
Trim71-201ENSMUST00000111816 Cnnm1Q0GA42 951 aa20.83■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ophn1Q99J31 802 aa20.83■□□□□ 0.93
Trim71-201ENSMUST00000111816 IqcdQ9D3V1 458 aa20.83■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ms4a1P19437 291 aa20.83■□□□□ 0.93
Trim71-201ENSMUST00000111816 Sdc2P43407 202 aa20.83■□□□□ 0.93
Trim71-201ENSMUST00000111816 Baiap2l1Q9DBJ3 514 aa20.83■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ccdc122Q8BVN0 290 aa20.83■□□□□ 0.93
Trim71-201ENSMUST00000111816 Ccdc7Q9D541 371 aa20.83■□□□□ 0.93
Trim71-201ENSMUST00000111816 Kdm4aQ8BW72 1064 aa20.83■□□□□ 0.92
Trim71-201ENSMUST00000111816 NpcdF8VQB8 469 aa20.83■□□□□ 0.92
Trim71-201ENSMUST00000111816 HdxQ14B70 692 aa20.83■□□□□ 0.92
Trim71-201ENSMUST00000111816 Pof1bQ8K4L4 587 aa20.83■□□□□ 0.92
Trim71-201ENSMUST00000111816 Gpr161B2RPY5 545 aa20.82■□□□□ 0.92
Trim71-201ENSMUST00000111816 Zbtb12Q9Z150 459 aa20.82■□□□□ 0.92
Trim71-201ENSMUST00000111816 LyarQ08288 388 aaKnown RBP20.82■□□□□ 0.92
Trim71-201ENSMUST00000111816 MycnP03966 462 aaKnown RBP20.82■□□□□ 0.92
Trim71-201ENSMUST00000111816 TatQ8QZR1 454 aa20.82■□□□□ 0.92
Trim71-201ENSMUST00000111816 VimP20152 466 aaKnown RBP20.82■□□□□ 0.92
Trim71-201ENSMUST00000111816 Micall1Q8BGT6 870 aa20.82■□□□□ 0.92
Trim71-201ENSMUST00000111816 Nop56Q9D6Z1 580 aaKnown RBP20.82■□□□□ 0.92
Trim71-201ENSMUST00000111816 GfapP03995 430 aa20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 Atf3Q60765 181 aa20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 Cep57Q8CEE0 500 aa20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 Ccdc89Q9DA73 370 aa20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 Ncoa2Q61026 1462 aa20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 Trove2O08848 538 aa20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 Rnf41Q8BH75 317 aa20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 CenppQ9CZ92 286 aa20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 Tmem266Q8BZB3 538 aa20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 Gjc1P28229 396 aa20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 Satb1Q60611 764 aa20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 Slc4a8Q8JZR6 1089 aa20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 Ccdc92Q8VDN4 314 aa20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 Spats2lQ91WJ7 558 aaKnown RBP20.81■□□□□ 0.92
Trim71-201ENSMUST00000111816 Tubb2aQ7TMM9 445 aa20.8■□□□□ 0.92
Trim71-201ENSMUST00000111816 Tubb2bQ9CWF2 445 aa20.8■□□□□ 0.92
Trim71-201ENSMUST00000111816 Zbtb16Q3UQ17 673 aa20.8■□□□□ 0.92
Trim71-201ENSMUST00000111816 Q8R1Y2 203 aa20.8■□□□□ 0.92
Trim71-201ENSMUST00000111816 Rai14Q9EP71 979 aaKnown RBP20.8■□□□□ 0.92
Trim71-201ENSMUST00000111816 Flad1Q8R123 492 aa20.8■□□□□ 0.92
Trim71-201ENSMUST00000111816 Erich2E9Q1A6 463 aa20.8■□□□□ 0.92
Trim71-201ENSMUST00000111816 Srgap1Q91Z69 1062 aa20.8■□□□□ 0.92
Trim71-201ENSMUST00000111816 S100bP50114 92 aa20.8■□□□□ 0.92
Trim71-201ENSMUST00000111816 Daam2Q80U19 1115 aa20.8■□□□□ 0.92
Trim71-201ENSMUST00000111816 Taf7Q9R1C0 341 aa20.8■□□□□ 0.92
Trim71-201ENSMUST00000111816 Gsta4P24472 222 aa20.79■□□□□ 0.92
Trim71-201ENSMUST00000111816 ErmnQ5EBJ4 281 aa20.79■□□□□ 0.92
Trim71-201ENSMUST00000111816 Cage1Q5IR70 849 aa20.79■□□□□ 0.92
Trim71-201ENSMUST00000111816 Hdac9Q99N13 588 aa20.79■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms