RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Rsph4aQ8BYM7 716 aa9.21□□□□□ -0.93
Scn8a-204ENSMUST00000108909 TchpQ3TVW5 497 aa9.21□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Ccdc42Q5SV66 316 aa9.21□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Dennd6aQ8BH65 605 aa9.21□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Mkrn1Q9QXP6 481 aa9.21□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Mybbp1aQ7TPV4 1344 aaKnown RBP9.21□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Ift88Q61371 824 aa9.21□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Esyt1Q3U7R1 1092 aaKnown RBP9.21□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Uchl5Q9WUP7 329 aa9.21□□□□□ -0.93
Scn8a-204ENSMUST00000108909 Rbm5Q91YE7 815 aaKnown RBP9.21□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Ccdc141E9Q8Q6 1531 aa9.21□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Cyp4f39Q8BGU0 532 aa9.21□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Larp6Q8BN59 492 aa9.21□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Bach2P97303 839 aa9.21□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Btbd11Q6GQW0 1109 aa9.21□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Usp11Q99K46 921 aa9.21□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Map7d1A2AJI0 846 aa9.21□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Zscan25B2RX31 543 aa9.21□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Ccdc6D3YZP9 469 aa9.21□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Mroh2bQ7M6Y6 1581 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 MlecQ6ZQI3 291 aaKnown RBP9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 StambpQ9CQ26 424 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Atad2bE9Q166 1460 aaKnown RBP9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Gsdma2Q32M21 443 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Ell2Q3UKU1 639 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Klhdc4Q921I2 584 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Hmg20bQ9Z104 317 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Opa1P58281 960 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Brd2Q7JJ13 798 aaKnown RBP9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Yeats4Q9CR11 227 aaKnown RBP9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Elp1Q7TT37 1333 aaKnown RBP9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 RttnQ8R4Y8 2226 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Ccdc152E9PX14 254 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Amotl1Q9D4H4 968 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 CalcaP70160 136 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Map3k11Q80XI6 850 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Ublcp1Q8BGR9 318 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Ccdc38Q8CDN8 563 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Cacna1cQ01815 2139 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Speer4aF8VPX6 267 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 VimP20152 466 aaKnown RBP9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Rassf2Q8BMS9 326 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Rprd2Q6NXI6 1469 aaKnown RBP9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Trim34bJ3QNR8 485 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Actn3O88990 900 aaKnown RBP9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Nup133Q8R0G9 1155 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Agbl1Q09M05 972 aa9.2□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Samd15F6XZJ7 620 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Atp2b1G5E829 1220 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Eif3j1Q3UGC7 261 aaKnown RBP9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Sun3Q5SS91 320 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Eif3j2Q66JS6 263 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Snd1Q78PY7 910 aaKnown RBP9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Prpf40aQ9R1C7 953 aaKnown RBP9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Usp35M0QWN7 1009 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Tex35Q14BK3 207 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Rbm19Q8R3C6 952 aaKnown RBP9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Ccdc121E9Q6D3 323 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 NapbP28663 298 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Nucb1Q02819 459 aaKnown RBP9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Hook3Q8BUK6 718 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Ndufab1Q9CR21 156 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Galntl5Q9D4M9 431 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Chd3B1AR17 2055 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Cct5P80316 541 aaKnown RBP9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Tsnaxip1Q99P25 704 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Supt6hQ62383 1726 aaKnown RBP9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Zfp853A0A1D5RM95 733 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Ddx10Q80Y44 875 aaKnown RBP9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Myo10F8VQB6 2062 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 AU022751B1B0V2 589 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Gramd4Q8CB44 633 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 HnrnpmQ9D0E1 729 aaKnown RBP9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Kif21bQ9QXL1 1668 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Ppfia1B2RXQ2 1266 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 RragbQ6NTA4 374 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Mrps25Q9D125 171 aaKnown RBP9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Nap1l5Q9JJF0 156 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Dpf1Q9QX66 387 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Polr3aB2RXC6 1390 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Kdm2bQ6P1G2 1309 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Drc1Q3USS3 753 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Specc1Q5SXY1 1067 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 EsrrbQ61539 433 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 SfpqQ8VIJ6 699 aaKnown RBP9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 AmfrQ9R049 643 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Kif5bQ61768 963 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Ctage5Q8R311 779 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 MycbpQ9EQS3 103 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Pdcd11Q6NS46 1862 aaKnown RBP9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Arhgap31A6X8Z5 1425 aa9.19□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Exoc3l2D3YUP5 789 aa9.18□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Rfc1P35601 1131 aa9.18□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Bach1P97302 739 aa9.18□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Specc1lQ2KN98 1118 aaKnown RBP9.18□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Ubxn1Q922Y1 297 aa9.18□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Duox2A2AQ99 1517 aa9.18□□□□□ -0.94
Scn8a-204ENSMUST00000108909 LifrP42703 1092 aa9.18□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Ift122Q6NWV3 1182 aa9.18□□□□□ -0.94
Scn8a-204ENSMUST00000108909 Gm21985Q6P6P5 1106 aa9.18□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms